BLASTX nr result

ID: Coptis23_contig00016873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016873
         (698 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278506.1| PREDICTED: uncharacterized protein LOC100267...    96   5e-18
emb|CAN83757.1| hypothetical protein VITISV_028373 [Vitis vinifera]    95   1e-17
gb|ABC01887.1| unknown [Solanum tuberosum]                             80   3e-13
ref|XP_003612837.1| hypothetical protein MTR_5g029620 [Medicago ...    79   9e-13
ref|XP_002304352.1| predicted protein [Populus trichocarpa] gi|1...    76   7e-12

>ref|XP_002278506.1| PREDICTED: uncharacterized protein LOC100267682 [Vitis vinifera]
          Length = 147

 Score = 96.3 bits (238), Expect = 5e-18
 Identities = 66/150 (44%), Positives = 81/150 (54%), Gaps = 25/150 (16%)
 Frame = +1

Query: 40  MQRQSLSSPGSKLNIH--------------EENDXXXXXXXXXXXXXXXXLTYNHSRADK 177
           MQRQSL SP SKL+IH              E++                 L  + S  DK
Sbjct: 1   MQRQSLGSPSSKLHIHGGGGGGAKEEILKAEKDLNQSQNDDEADHKSLKPLRSSSSPPDK 60

Query: 178 SIHLIPLLTVFCFLILYLVSHDPLQQELVHINGFKRPS--IVNLDRVLDIE----KSDVL 339
            IHLIPLL +FCFL+LYL SHDP   EL   +GFK+ S  + + + + D+E    KSDV 
Sbjct: 61  LIHLIPLLMLFCFLLLYLFSHDPSHSELAQFDGFKKRSSKLTDSNEIADLERFVVKSDVF 120

Query: 340 AIRSYRSLQEI-----KKRGLILHRKMGDF 414
           +IRS R+LQEI     K R   LHRKMGDF
Sbjct: 121 SIRSLRNLQEIGTYAPKSR---LHRKMGDF 147


>emb|CAN83757.1| hypothetical protein VITISV_028373 [Vitis vinifera]
          Length = 150

 Score = 95.1 bits (235), Expect = 1e-17
 Identities = 66/153 (43%), Positives = 81/153 (52%), Gaps = 28/153 (18%)
 Frame = +1

Query: 40  MQRQSLSSPGSKLNIH-----------------EENDXXXXXXXXXXXXXXXXLTYNHSR 168
           MQRQSL SP SKL+IH                 E++                 L  + S 
Sbjct: 1   MQRQSLGSPSSKLHIHGGGGGGGGGAKEEILKAEKDLNQSQNDDEADHKSLKPLRSSSSP 60

Query: 169 ADKSIHLIPLLTVFCFLILYLVSHDPLQQELVHINGFKRPS--IVNLDRVLDIE----KS 330
            DK IHLIPLL +FCFL+LYL SHDP   EL   +GFK+ S  + + + + D+E    KS
Sbjct: 61  PDKLIHLIPLLMLFCFLLLYLFSHDPSHSELAQFDGFKKRSSKLTDSNEIADLERFVVKS 120

Query: 331 DVLAIRSYRSLQEI-----KKRGLILHRKMGDF 414
           DV +IRS R+LQEI     K R   LHRKMGDF
Sbjct: 121 DVFSIRSLRNLQEIGTYAPKSR---LHRKMGDF 150


>gb|ABC01887.1| unknown [Solanum tuberosum]
          Length = 167

 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 48/93 (51%), Positives = 58/93 (62%), Gaps = 9/93 (9%)
 Frame = +1

Query: 163 SRADKSIHLIPLLTVFCFLILYLVSHDPLQQELVHINGF----KRPSIVNLD---RVLDI 321
           SRA+K IHLIP+LT  CF ILYL SH P  ++L    GF    KR    N+D   RVL+I
Sbjct: 75  SRAEKYIHLIPVLTFLCFFILYLFSHSPSDKDLAQFQGFEGFTKRIESANIDELHRVLEI 134

Query: 322 EKSDVLAIRSYRSLQEIKKRGL--ILHRKMGDF 414
           E   VLAIRS R+LQEI ++      HRK+ DF
Sbjct: 135 ENPPVLAIRSTRNLQEINRQDAKHRRHRKLADF 167


>ref|XP_003612837.1| hypothetical protein MTR_5g029620 [Medicago truncatula]
           gi|355514172|gb|AES95795.1| hypothetical protein
           MTR_5g029620 [Medicago truncatula]
          Length = 162

 Score = 79.0 bits (193), Expect = 9e-13
 Identities = 57/134 (42%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
 Frame = +1

Query: 40  MQRQSLSSPGSKLNIHEENDXXXXXXXXXXXXXXXXLTYNHSRADKSIHLIPLLTVFCFL 219
           M RQSL SP SKL++H                    L+   S  +K IHLIP+LT+FCF 
Sbjct: 1   MHRQSLGSPSSKLHLHGGVVNGGDTIIADEPPKPHRLSSPPSPPNKFIHLIPILTLFCFF 60

Query: 220 ILYLVSHDPLQQELVHING---FKRPSIVNLDRVL---------DIEKSDVLAIRSYRSL 363
           ILY  SH P   EL H NG   FKR +  NL   +         D ++SDVLAI   RSL
Sbjct: 61  ILYFFSHTPSPSELTHFNGFTAFKRSNNHNLAAEINGDIGVHYDDAKRSDVLAI---RSL 117

Query: 364 QEIKKRGLILHRKM 405
           Q+I K    LHRK+
Sbjct: 118 QQIPKSQ--LHRKL 129


>ref|XP_002304352.1| predicted protein [Populus trichocarpa] gi|118484537|gb|ABK94143.1|
           unknown [Populus trichocarpa]
           gi|222841784|gb|EEE79331.1| predicted protein [Populus
           trichocarpa]
          Length = 170

 Score = 75.9 bits (185), Expect = 7e-12
 Identities = 43/95 (45%), Positives = 59/95 (62%), Gaps = 14/95 (14%)
 Frame = +1

Query: 172 DKSIHLIPLLTVFCFLILYLVSHDPLQQELVHINGFKR---------PSIVNLDRVLDIE 324
           +K IHLIP LT+FCFL+L+LVSH+P Q +L   NGFKR          S+ ++  +  + 
Sbjct: 76  EKLIHLIPFLTLFCFLVLFLVSHNPSQADLAQFNGFKRVSNHIEEAIESVGDVSGLSAVR 135

Query: 325 KSDVLAIRSYRSLQEI--KKRGLI---LHRKMGDF 414
           + DVLA+RS+R+LQEI   KR  +    HRK   F
Sbjct: 136 RGDVLAVRSFRNLQEIAADKRAPLKVRSHRKFAHF 170


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