BLASTX nr result
ID: Coptis23_contig00016873
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00016873 (698 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278506.1| PREDICTED: uncharacterized protein LOC100267... 96 5e-18 emb|CAN83757.1| hypothetical protein VITISV_028373 [Vitis vinifera] 95 1e-17 gb|ABC01887.1| unknown [Solanum tuberosum] 80 3e-13 ref|XP_003612837.1| hypothetical protein MTR_5g029620 [Medicago ... 79 9e-13 ref|XP_002304352.1| predicted protein [Populus trichocarpa] gi|1... 76 7e-12 >ref|XP_002278506.1| PREDICTED: uncharacterized protein LOC100267682 [Vitis vinifera] Length = 147 Score = 96.3 bits (238), Expect = 5e-18 Identities = 66/150 (44%), Positives = 81/150 (54%), Gaps = 25/150 (16%) Frame = +1 Query: 40 MQRQSLSSPGSKLNIH--------------EENDXXXXXXXXXXXXXXXXLTYNHSRADK 177 MQRQSL SP SKL+IH E++ L + S DK Sbjct: 1 MQRQSLGSPSSKLHIHGGGGGGAKEEILKAEKDLNQSQNDDEADHKSLKPLRSSSSPPDK 60 Query: 178 SIHLIPLLTVFCFLILYLVSHDPLQQELVHINGFKRPS--IVNLDRVLDIE----KSDVL 339 IHLIPLL +FCFL+LYL SHDP EL +GFK+ S + + + + D+E KSDV Sbjct: 61 LIHLIPLLMLFCFLLLYLFSHDPSHSELAQFDGFKKRSSKLTDSNEIADLERFVVKSDVF 120 Query: 340 AIRSYRSLQEI-----KKRGLILHRKMGDF 414 +IRS R+LQEI K R LHRKMGDF Sbjct: 121 SIRSLRNLQEIGTYAPKSR---LHRKMGDF 147 >emb|CAN83757.1| hypothetical protein VITISV_028373 [Vitis vinifera] Length = 150 Score = 95.1 bits (235), Expect = 1e-17 Identities = 66/153 (43%), Positives = 81/153 (52%), Gaps = 28/153 (18%) Frame = +1 Query: 40 MQRQSLSSPGSKLNIH-----------------EENDXXXXXXXXXXXXXXXXLTYNHSR 168 MQRQSL SP SKL+IH E++ L + S Sbjct: 1 MQRQSLGSPSSKLHIHGGGGGGGGGAKEEILKAEKDLNQSQNDDEADHKSLKPLRSSSSP 60 Query: 169 ADKSIHLIPLLTVFCFLILYLVSHDPLQQELVHINGFKRPS--IVNLDRVLDIE----KS 330 DK IHLIPLL +FCFL+LYL SHDP EL +GFK+ S + + + + D+E KS Sbjct: 61 PDKLIHLIPLLMLFCFLLLYLFSHDPSHSELAQFDGFKKRSSKLTDSNEIADLERFVVKS 120 Query: 331 DVLAIRSYRSLQEI-----KKRGLILHRKMGDF 414 DV +IRS R+LQEI K R LHRKMGDF Sbjct: 121 DVFSIRSLRNLQEIGTYAPKSR---LHRKMGDF 150 >gb|ABC01887.1| unknown [Solanum tuberosum] Length = 167 Score = 80.5 bits (197), Expect = 3e-13 Identities = 48/93 (51%), Positives = 58/93 (62%), Gaps = 9/93 (9%) Frame = +1 Query: 163 SRADKSIHLIPLLTVFCFLILYLVSHDPLQQELVHINGF----KRPSIVNLD---RVLDI 321 SRA+K IHLIP+LT CF ILYL SH P ++L GF KR N+D RVL+I Sbjct: 75 SRAEKYIHLIPVLTFLCFFILYLFSHSPSDKDLAQFQGFEGFTKRIESANIDELHRVLEI 134 Query: 322 EKSDVLAIRSYRSLQEIKKRGL--ILHRKMGDF 414 E VLAIRS R+LQEI ++ HRK+ DF Sbjct: 135 ENPPVLAIRSTRNLQEINRQDAKHRRHRKLADF 167 >ref|XP_003612837.1| hypothetical protein MTR_5g029620 [Medicago truncatula] gi|355514172|gb|AES95795.1| hypothetical protein MTR_5g029620 [Medicago truncatula] Length = 162 Score = 79.0 bits (193), Expect = 9e-13 Identities = 57/134 (42%), Positives = 69/134 (51%), Gaps = 12/134 (8%) Frame = +1 Query: 40 MQRQSLSSPGSKLNIHEENDXXXXXXXXXXXXXXXXLTYNHSRADKSIHLIPLLTVFCFL 219 M RQSL SP SKL++H L+ S +K IHLIP+LT+FCF Sbjct: 1 MHRQSLGSPSSKLHLHGGVVNGGDTIIADEPPKPHRLSSPPSPPNKFIHLIPILTLFCFF 60 Query: 220 ILYLVSHDPLQQELVHING---FKRPSIVNLDRVL---------DIEKSDVLAIRSYRSL 363 ILY SH P EL H NG FKR + NL + D ++SDVLAI RSL Sbjct: 61 ILYFFSHTPSPSELTHFNGFTAFKRSNNHNLAAEINGDIGVHYDDAKRSDVLAI---RSL 117 Query: 364 QEIKKRGLILHRKM 405 Q+I K LHRK+ Sbjct: 118 QQIPKSQ--LHRKL 129 >ref|XP_002304352.1| predicted protein [Populus trichocarpa] gi|118484537|gb|ABK94143.1| unknown [Populus trichocarpa] gi|222841784|gb|EEE79331.1| predicted protein [Populus trichocarpa] Length = 170 Score = 75.9 bits (185), Expect = 7e-12 Identities = 43/95 (45%), Positives = 59/95 (62%), Gaps = 14/95 (14%) Frame = +1 Query: 172 DKSIHLIPLLTVFCFLILYLVSHDPLQQELVHINGFKR---------PSIVNLDRVLDIE 324 +K IHLIP LT+FCFL+L+LVSH+P Q +L NGFKR S+ ++ + + Sbjct: 76 EKLIHLIPFLTLFCFLVLFLVSHNPSQADLAQFNGFKRVSNHIEEAIESVGDVSGLSAVR 135 Query: 325 KSDVLAIRSYRSLQEI--KKRGLI---LHRKMGDF 414 + DVLA+RS+R+LQEI KR + HRK F Sbjct: 136 RGDVLAVRSFRNLQEIAADKRAPLKVRSHRKFAHF 170