BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016858
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149022.1| PREDICTED: ribosome biogenesis regulatory pr...    91   7e-17
ref|XP_002306885.1| predicted protein [Populus trichocarpa] gi|2...    89   3e-16
ref|XP_002264648.1| PREDICTED: ribosome biogenesis regulatory pr...    88   8e-16
ref|XP_002524474.1| ribosome biogenesis regulatory protein, puta...    87   1e-15
ref|XP_002879721.1| ribosome biogenesis regulatory protein famil...    87   1e-15

>ref|XP_004149022.1| PREDICTED: ribosome biogenesis regulatory protein homolog [Cucumis
           sativus] gi|449476004|ref|XP_004154612.1| PREDICTED:
           ribosome biogenesis regulatory protein homolog [Cucumis
           sativus]
          Length = 329

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 40/59 (67%), Positives = 51/59 (86%)
 Frame = +2

Query: 101 YQVDVGNLMAFDPHHHFTSLPPTREALAEECLRRGTALVQAIANSLFSLPSTEDQDGPL 277
           +Q+D+G+LMAF+PHH F SLP +RE L  ECL++GT LVQ+IAN LF+LPSTED+DGPL
Sbjct: 9   FQIDLGHLMAFNPHHQFPSLPSSREDLVSECLQKGTELVQSIANDLFNLPSTEDRDGPL 67


>ref|XP_002306885.1| predicted protein [Populus trichocarpa] gi|222856334|gb|EEE93881.1|
           predicted protein [Populus trichocarpa]
          Length = 298

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 41/59 (69%), Positives = 46/59 (77%)
 Frame = +2

Query: 101 YQVDVGNLMAFDPHHHFTSLPPTREALAEECLRRGTALVQAIANSLFSLPSTEDQDGPL 277
           YQVD+GNLMAFDP HHFTS+P  R  L  ECL  GT LVQAI + +F+LPSTED DGPL
Sbjct: 1   YQVDLGNLMAFDPFHHFTSIPSARSELVAECLSNGTELVQAIVSGVFNLPSTEDIDGPL 59


>ref|XP_002264648.1| PREDICTED: ribosome biogenesis regulatory protein homolog [Vitis
           vinifera] gi|296088996|emb|CBI38699.3| unnamed protein
           product [Vitis vinifera]
          Length = 327

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 39/63 (61%), Positives = 53/63 (84%)
 Frame = +2

Query: 89  GDNKYQVDVGNLMAFDPHHHFTSLPPTREALAEECLRRGTALVQAIANSLFSLPSTEDQD 268
           G  ++Q+D+G+L+AFDP HHF S P +RE L +ECL++GT LVQ+IA++LF+LPSTED D
Sbjct: 2   GTQEHQIDLGHLLAFDPLHHFPSPPSSREELVKECLQKGTELVQSIADTLFNLPSTEDID 61

Query: 269 GPL 277
           GPL
Sbjct: 62  GPL 64


>ref|XP_002524474.1| ribosome biogenesis regulatory protein, putative [Ricinus communis]
           gi|223536262|gb|EEF37914.1| ribosome biogenesis
           regulatory protein, putative [Ricinus communis]
          Length = 340

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 38/60 (63%), Positives = 50/60 (83%)
 Frame = +2

Query: 98  KYQVDVGNLMAFDPHHHFTSLPPTREALAEECLRRGTALVQAIANSLFSLPSTEDQDGPL 277
           +Y VD+G+L+AFDPHH+F SLP +RE L +EC+ +GT L+QA+A  LF+LPSTED DGPL
Sbjct: 7   QYDVDLGHLLAFDPHHNFPSLPSSREDLVKECITKGTELIQAVAAGLFNLPSTEDIDGPL 66


>ref|XP_002879721.1| ribosome biogenesis regulatory protein family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297325560|gb|EFH55980.1|
           ribosome biogenesis regulatory protein family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 324

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 39/59 (66%), Positives = 47/59 (79%)
 Frame = +2

Query: 101 YQVDVGNLMAFDPHHHFTSLPPTREALAEECLRRGTALVQAIANSLFSLPSTEDQDGPL 277
           YQVDVGNL+AF+P+H F S P +RE L  EC+R GT LVQAIAN+LF+ PSTE  DGP+
Sbjct: 11  YQVDVGNLLAFNPNHRFPSAPSSREELVNECIREGTKLVQAIANTLFNFPSTETNDGPI 69