BLASTX nr result

ID: Coptis23_contig00016840 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016840
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P08926.2|RUBA_PEA RecName: Full=RuBisCO large subunit-binding...    74   2e-11
gb|ACA23472.1| chaperonin 60 alpha subunit [Arachis diogoi]            73   3e-11
ref|XP_003539777.1| PREDICTED: ruBisCO large subunit-binding pro...    72   5e-11
ref|XP_003538152.1| PREDICTED: ruBisCO large subunit-binding pro...    72   5e-11
gb|AEO21430.1| putative rubisco subunit binding-protein alpha su...    72   5e-11

>sp|P08926.2|RUBA_PEA RecName: Full=RuBisCO large subunit-binding protein subunit alpha,
           chloroplastic; AltName: Full=60 kDa chaperonin subunit
           alpha; AltName: Full=CPN-60 alpha; Flags: Precursor
           gi|1185390|gb|AAA87731.1| alphacpn60 precursor [Pisum
           sativum]
          Length = 587

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 36/47 (76%), Positives = 40/47 (85%)
 Frame = +3

Query: 3   LDPAKVTRCALQNAASVAGMVLTTQATVVEKPKDKSTIAAVLSGLAV 143
           +DPAKVTRCALQNAASVAGMVLTTQA VVEKPK K+ +AA   GL +
Sbjct: 541 IDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKAAVAAAPQGLTI 587


>gb|ACA23472.1| chaperonin 60 alpha subunit [Arachis diogoi]
          Length = 125

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 37/47 (78%), Positives = 40/47 (85%)
 Frame = +3

Query: 3   LDPAKVTRCALQNAASVAGMVLTTQATVVEKPKDKSTIAAVLSGLAV 143
           +DPAKVTRCALQNAASVAGMVLTTQA VVEKPK K+ +AA   GL V
Sbjct: 79  IDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKAPVAAPPQGLTV 125


>ref|XP_003539777.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
           chloroplastic-like [Glycine max]
          Length = 584

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 36/47 (76%), Positives = 39/47 (82%)
 Frame = +3

Query: 3   LDPAKVTRCALQNAASVAGMVLTTQATVVEKPKDKSTIAAVLSGLAV 143
           +DPAKVTRCALQNAASVAGMVLTTQA VVEKPK K+ +A    GL V
Sbjct: 538 IDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKAPVAGAPQGLTV 584


>ref|XP_003538152.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
           chloroplastic-like isoform 1 [Glycine max]
          Length = 584

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 36/47 (76%), Positives = 39/47 (82%)
 Frame = +3

Query: 3   LDPAKVTRCALQNAASVAGMVLTTQATVVEKPKDKSTIAAVLSGLAV 143
           +DPAKVTRCALQNAASVAGMVLTTQA VVEKPK K+ +A    GL V
Sbjct: 538 IDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKAPVAGAPQGLTV 584


>gb|AEO21430.1| putative rubisco subunit binding-protein alpha subunit [Glycine
           max]
          Length = 584

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 36/47 (76%), Positives = 39/47 (82%)
 Frame = +3

Query: 3   LDPAKVTRCALQNAASVAGMVLTTQATVVEKPKDKSTIAAVLSGLAV 143
           +DPAKVTRCALQNAASVAGMVLTTQA VVEKPK K+ +A    GL V
Sbjct: 538 IDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKAPVAGAPQGLTV 584


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