BLASTX nr result

ID: Coptis23_contig00016829 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016829
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336447.1| predicted protein [Populus trichocarpa] gi|2...    99   3e-19
ref|XP_003633237.1| PREDICTED: uncharacterized protein LOC100243...    99   4e-19
ref|XP_003633235.1| PREDICTED: uncharacterized protein LOC100243...    99   4e-19
ref|XP_003633234.1| PREDICTED: uncharacterized protein LOC100243...    99   4e-19
ref|XP_002329835.1| predicted protein [Populus trichocarpa] gi|2...    99   5e-19

>ref|XP_002336447.1| predicted protein [Populus trichocarpa] gi|222835040|gb|EEE73489.1|
           predicted protein [Populus trichocarpa]
          Length = 95

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 52/82 (63%), Positives = 60/82 (73%), Gaps = 8/82 (9%)
 Frame = +1

Query: 1   RSFLRSTTF--------RTASKSARSPFQLPKQSPLSSRIFRSPVELSCAVETLLPFHTA 156
           RSFLRST+         +  SK A SPF++ KQSP S RIFRSPVE+SC VET+LP+HTA
Sbjct: 8   RSFLRSTSAAARMASAQKAGSKPAFSPFRISKQSPFSPRIFRSPVEMSCCVETMLPYHTA 67

Query: 157 TASALLTSMLSVSRPGLGWLPE 222
           T+SALL SMLSVSR   GW PE
Sbjct: 68  TSSALLNSMLSVSRRSYGWTPE 89


>ref|XP_003633237.1| PREDICTED: uncharacterized protein LOC100243665 isoform 5 [Vitis
           vinifera]
          Length = 92

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 52/82 (63%), Positives = 62/82 (75%), Gaps = 7/82 (8%)
 Frame = +1

Query: 1   RSFLRSTTFRTAS-------KSARSPFQLPKQSPLSSRIFRSPVELSCAVETLLPFHTAT 159
           RS  RST+ R A+       K+ARSP ++    PLS+RIFR PVELSC VET++PFHTAT
Sbjct: 11  RSIFRSTSVRNAAARVASEAKAARSPLRISSNKPLSNRIFRCPVELSC-VETMVPFHTAT 69

Query: 160 ASALLTSMLSVSRPGLGWLPEG 225
           ASAL+TSMLS+SR G GWLPEG
Sbjct: 70  ASALMTSMLSISRRGYGWLPEG 91


>ref|XP_003633235.1| PREDICTED: uncharacterized protein LOC100243665 isoform 3 [Vitis
           vinifera]
          Length = 96

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 52/82 (63%), Positives = 62/82 (75%), Gaps = 7/82 (8%)
 Frame = +1

Query: 1   RSFLRSTTFRTAS-------KSARSPFQLPKQSPLSSRIFRSPVELSCAVETLLPFHTAT 159
           RS  RST+ R A+       K+ARSP ++    PLS+RIFR PVELSC VET++PFHTAT
Sbjct: 11  RSIFRSTSVRNAAARVASEAKAARSPLRISSNKPLSNRIFRCPVELSC-VETMVPFHTAT 69

Query: 160 ASALLTSMLSVSRPGLGWLPEG 225
           ASAL+TSMLS+SR G GWLPEG
Sbjct: 70  ASALMTSMLSISRRGYGWLPEG 91


>ref|XP_003633234.1| PREDICTED: uncharacterized protein LOC100243665 isoform 2 [Vitis
           vinifera] gi|302143334|emb|CBI21895.3| unnamed protein
           product [Vitis vinifera]
          Length = 92

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 52/82 (63%), Positives = 62/82 (75%), Gaps = 7/82 (8%)
 Frame = +1

Query: 1   RSFLRSTTFRTAS-------KSARSPFQLPKQSPLSSRIFRSPVELSCAVETLLPFHTAT 159
           RS  RST+ R A+       K+ARSP ++    PLS+RIFR PVELSC VET++PFHTAT
Sbjct: 11  RSIFRSTSVRNAAARVASEAKAARSPLRISSNKPLSNRIFRCPVELSC-VETMVPFHTAT 69

Query: 160 ASALLTSMLSVSRPGLGWLPEG 225
           ASAL+TSMLS+SR G GWLPEG
Sbjct: 70  ASALMTSMLSISRRGYGWLPEG 91


>ref|XP_002329835.1| predicted protein [Populus trichocarpa] gi|222870897|gb|EEF08028.1|
           predicted protein [Populus trichocarpa]
          Length = 98

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 55/86 (63%), Positives = 62/86 (72%), Gaps = 12/86 (13%)
 Frame = +1

Query: 1   RSFLRSTTFRTA------------SKSARSPFQLPKQSPLSSRIFRSPVELSCAVETLLP 144
           RSFLRST  RT+            SK A SPF++ K+SPLS RIFRSPVE+SC VET+LP
Sbjct: 8   RSFLRSTATRTSAAARLASAPKPGSKPASSPFRISKESPLSHRIFRSPVEMSCCVETMLP 67

Query: 145 FHTATASALLTSMLSVSRPGLGWLPE 222
           +HTATASALL SMLSVSR   GW PE
Sbjct: 68  YHTATASALLNSMLSVSR-RYGWTPE 92


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