BLASTX nr result

ID: Coptis23_contig00016828 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016828
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003678678.1| hypothetical protein TDEL_0A01350 [Torulaspo...    84   2e-14
ref|XP_449280.1| hypothetical protein [Candida glabrata CBS 138]...    83   3e-14
ref|XP_002987288.1| hypothetical protein SELMODRAFT_269256 [Sela...    83   3e-14
ref|XP_002555655.1| KLTH0G14344p [Lachancea thermotolerans] gi|2...    82   4e-14
ref|XP_003673315.1| hypothetical protein NCAS_0A03680 [Naumovozy...    82   6e-14

>ref|XP_003678678.1| hypothetical protein TDEL_0A01350 [Torulaspora delbrueckii]
           gi|359746335|emb|CCE89467.1| hypothetical protein
           TDEL_0A01350 [Torulaspora delbrueckii]
          Length = 588

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 49/108 (45%), Positives = 65/108 (60%), Gaps = 4/108 (3%)
 Frame = -1

Query: 313 ESMAVRTGPSPPLFVGELDPSVTEVDLYDIFSKVGKVSFVRLCRDPITQLFLGRACVYYT 134
           ES  V T  S  L+VGELDPSV+E  LYDIFS +G VS +R+CRD IT+  LG A V + 
Sbjct: 33  ESQKVETS-SASLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFN 91

Query: 133 HSQHAKIAVESLNSQPIKGRNITVGFSETE----RITSDKLFVKRLPP 2
             +  K A+E LN  PIKG    + +S+ +    +  S  +F+K L P
Sbjct: 92  DHEAGKTAIEKLNYAPIKGVPCRIMWSQRDPSMRKKGSGNIFIKNLHP 139


>ref|XP_449280.1| hypothetical protein [Candida glabrata CBS 138]
           gi|74690665|sp|Q6FKG4.1|PABP_CANGA RecName:
           Full=Polyadenylate-binding protein, cytoplasmic and
           nuclear; Short=PABP; Short=Poly(A)-binding protein;
           AltName: Full=Polyadenylate tail-binding protein
           gi|49528593|emb|CAG62254.1| unnamed protein product
           [Candida glabrata]
          Length = 579

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
 Frame = -1

Query: 286 SPPLFVGELDPSVTEVDLYDIFSKVGKVSFVRLCRDPITQLFLGRACVYYTHSQHAKIAV 107
           S  L+VG+LDPSV+E  LYDIFS +G VS +R+CRD IT+  LG A V +     AK A+
Sbjct: 34  SASLYVGDLDPSVSEAHLYDIFSPIGAVSSIRVCRDAITKTSLGYAYVNFNDHDAAKTAI 93

Query: 106 ESLNSQPIKGRNITVGFSETERITSDK----LFVKRLPP 2
           E LN  PIKG+   + +S+ +     K    +F+K L P
Sbjct: 94  EKLNFTPIKGKLCRIMWSQRDPSLRKKGAGNIFIKNLHP 132


>ref|XP_002987288.1| hypothetical protein SELMODRAFT_269256 [Selaginella moellendorffii]
           gi|302815025|ref|XP_002989195.1| hypothetical protein
           SELMODRAFT_269487 [Selaginella moellendorffii]
           gi|300143095|gb|EFJ09789.1| hypothetical protein
           SELMODRAFT_269487 [Selaginella moellendorffii]
           gi|300144923|gb|EFJ11603.1| hypothetical protein
           SELMODRAFT_269256 [Selaginella moellendorffii]
          Length = 567

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 47/110 (42%), Positives = 63/110 (57%), Gaps = 10/110 (9%)
 Frame = -1

Query: 307 MAVRTGP------SPPLFVGELDPSVTEVDLYDIFSKVGKVSFVRLCRDPITQLFLGRAC 146
           MA  T P      S  L+VG+LDPSV E  ++DIF ++G V  VRLCRD +T+  LG A 
Sbjct: 1   MAQETSPPRSPFASTALYVGDLDPSVNEAQIFDIFKQIGNVMSVRLCRDMVTKRSLGYAY 60

Query: 145 VYYTHSQHAKIAVESLNSQPIKGRNITVGFS----ETERITSDKLFVKRL 8
           V Y ++Q A  A+E LN  P+ G+ + + FS       +  S  LFVK L
Sbjct: 61  VNYNNTQDASRAIEELNFMPVNGKPVRIMFSYRDPSIRKSGSGNLFVKNL 110


>ref|XP_002555655.1| KLTH0G14344p [Lachancea thermotolerans]
           gi|238937039|emb|CAR25218.1| KLTH0G14344p [Lachancea
           thermotolerans CBS 6340]
          Length = 587

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
 Frame = -1

Query: 286 SPPLFVGELDPSVTEVDLYDIFSKVGKVSFVRLCRDPITQLFLGRACVYYTHSQHAKIAV 107
           S  L+VGELDPSVTE  LYD+FS +G VS +R+CRD IT+  LG A V +      + A+
Sbjct: 39  SASLYVGELDPSVTEALLYDLFSPIGSVSSIRVCRDAITKTSLGYAYVNFHDHNAGRTAI 98

Query: 106 ESLNSQPIKGRNITVGFSETE----RITSDKLFVKRLPP 2
           E LN  PIKGR   + +S+ +    +  S  +F+K L P
Sbjct: 99  EKLNYTPIKGRPCRIMWSQRDPSLRKKGSGNVFIKNLHP 137


>ref|XP_003673315.1| hypothetical protein NCAS_0A03680 [Naumovozyma castellii CBS 4309]
           gi|342299178|emb|CCC66926.1| hypothetical protein
           NCAS_0A03680 [Naumovozyma castellii CBS 4309]
          Length = 575

 Score = 82.0 bits (201), Expect = 6e-14
 Identities = 47/108 (43%), Positives = 65/108 (60%), Gaps = 5/108 (4%)
 Frame = -1

Query: 310 SMAVRTGPSPP-LFVGELDPSVTEVDLYDIFSKVGKVSFVRLCRDPITQLFLGRACVYYT 134
           S    T  SP  L+VGELDP+V+E  LYDIFS +G VS +R+CRD +T+  LG A V + 
Sbjct: 25  STTTSTETSPASLYVGELDPTVSEALLYDIFSPIGSVSSIRVCRDAVTKTSLGYAYVNFN 84

Query: 133 HSQHAKIAVESLNSQPIKGRNITVGFSETE----RITSDKLFVKRLPP 2
             +  K A+E LN  PIKGR   + +S+ +    +  S  +F+K L P
Sbjct: 85  DHEAGKKAIEQLNYTPIKGRLCRIMWSQRDPALRKKGSGNIFIKNLHP 132


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