BLASTX nr result

ID: Coptis23_contig00016821 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016821
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328486.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_002319082.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23
gb|ACV92027.1| WRKY transcription factor 25 [(Populus tomentosa ...   108   6e-22
ref|XP_002270614.1| PREDICTED: probable WRKY transcription facto...   106   2e-21
emb|CAN78417.1| hypothetical protein VITISV_001732 [Vitis vinifera]   106   2e-21

>ref|XP_002328486.1| predicted protein [Populus trichocarpa] gi|222838201|gb|EEE76566.1|
           predicted protein [Populus trichocarpa]
          Length = 353

 Score =  117 bits (293), Expect = 1e-24
 Identities = 65/134 (48%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
 Frame = -1

Query: 406 CYRVVSLLSKHLDQTQYRNLMMETGNTVFKFKKVVSLLSTNSGHGRVRKLKNDHFQSSLP 227
           C RV+ LL +  DQ Q RNLM+ETG TVFKFK+V+SLLST  GHGRVRKLK   F+SSLP
Sbjct: 15  CNRVIGLLCQPKDQVQGRNLMVETGETVFKFKRVISLLSTGLGHGRVRKLKK--FRSSLP 72

Query: 226 QNIFLDSPTTLKGFSTQTLQL-----LDKPYIDLNSTAKTTMQLTSKKILESSVLDRGSV 62
           QNIFLDSP      + + LQ+     L+ P  D+++ +K  +Q+  K  LE+ VL+  S 
Sbjct: 73  QNIFLDSPNCKTILAPKPLQMVPPNFLETPLGDMDAKSKLPVQIAQKMFLENPVLELNSN 132

Query: 61  SKSSFNLTQQHPPS 20
           ++    + Q  PP+
Sbjct: 133 TRPPLQIAQTKPPN 146


>ref|XP_002319082.1| predicted protein [Populus trichocarpa] gi|222857458|gb|EEE95005.1|
           predicted protein [Populus trichocarpa]
          Length = 355

 Score =  112 bits (280), Expect = 3e-23
 Identities = 62/133 (46%), Positives = 85/133 (63%), Gaps = 5/133 (3%)
 Frame = -1

Query: 406 CYRVVSLLSKHLDQTQYRNLMMETGNTVFKFKKVVSLLSTNSGHGRVRKLKNDHFQSSLP 227
           C RV+ LL +  DQ Q RNLM+ET  TVFKFK+V+SLLST  GHGRVRK+K    + SLP
Sbjct: 15  CNRVIGLLCQQKDQVQGRNLMVETRETVFKFKRVISLLSTGLGHGRVRKMKK--LRPSLP 72

Query: 226 QNIFLDSPTTLKGFSTQTLQL-----LDKPYIDLNSTAKTTMQLTSKKILESSVLDRGSV 62
           QNIFLDSP      S + LQ+     L+ P  D+++ +K ++Q++ K +LE+ VL+  S 
Sbjct: 73  QNIFLDSPNCKTVLSPKPLQMVPPNFLETPLTDMDAKSKPSIQISQKMLLENPVLELNSN 132

Query: 61  SKSSFNLTQQHPP 23
            +    + Q  PP
Sbjct: 133 IRPPVQIMQTKPP 145


>gb|ACV92027.1| WRKY transcription factor 25 [(Populus tomentosa x P. bolleana) x
           P. tomentosa]
          Length = 354

 Score =  108 bits (269), Expect = 6e-22
 Identities = 61/133 (45%), Positives = 82/133 (61%), Gaps = 5/133 (3%)
 Frame = -1

Query: 406 CYRVVSLLSKHLDQTQYRNLMMETGNTVFKFKKVVSLLSTNSGHGRVRKLKNDHFQSSLP 227
           C RV+ LL +  DQ Q  NLM+ET  TVFKFK+V+SLLST  GHGRVRK+K    + SLP
Sbjct: 15  CNRVIGLLCQEKDQVQGSNLMVETRETVFKFKRVISLLSTGLGHGRVRKMKK--LRPSLP 72

Query: 226 QNIFLDSPTTLKGFSTQTLQL-----LDKPYIDLNSTAKTTMQLTSKKILESSVLDRGSV 62
           QNIFLDSP      S + LQ+     L+ P  D+++ +K ++Q++ K  LE+ VL+  S 
Sbjct: 73  QNIFLDSPNCKTILSPKPLQMVPPNFLETPLTDMDAKSKPSIQISQKMFLENPVLELNSN 132

Query: 61  SKSSFNLTQQHPP 23
                 + Q  PP
Sbjct: 133 ISPPVQIMQTKPP 145


>ref|XP_002270614.1| PREDICTED: probable WRKY transcription factor 74-like [Vitis
           vinifera]
          Length = 362

 Score =  106 bits (265), Expect = 2e-21
 Identities = 65/138 (47%), Positives = 85/138 (61%), Gaps = 5/138 (3%)
 Frame = -1

Query: 406 CYRVVSLLSKHLDQTQYRNLMMETGNTVFKFKKVVSLLSTNSGHGRVRKLKNDHFQSSLP 227
           C+RV+S L +  DQ QYRNLMMET   VFKFK+VVSLL+   GH RVRK +    +SSLP
Sbjct: 15  CHRVLSFLCQPQDQVQYRNLMMETEEAVFKFKRVVSLLNNGFGHERVRKFR--RLRSSLP 72

Query: 226 QNIFLDSPTTLKGFSTQTLQL-----LDKPYIDLNSTAKTTMQLTSKKILESSVLDRGSV 62
           Q+IFL++P      S + LQL     L+ P  +++S AK+++Q+T K  LES   D  S 
Sbjct: 73  QSIFLETPNYKPNPSPKPLQLLPTNFLENPLPEIDSKAKSSLQITPKIFLESQASDIVSS 132

Query: 61  SKSSFNLTQQHPPSTPYQ 8
            K    + QQ  PS  YQ
Sbjct: 133 VKPPLQIVQQ-KPSQHYQ 149


>emb|CAN78417.1| hypothetical protein VITISV_001732 [Vitis vinifera]
          Length = 307

 Score =  106 bits (265), Expect = 2e-21
 Identities = 65/138 (47%), Positives = 85/138 (61%), Gaps = 5/138 (3%)
 Frame = -1

Query: 406 CYRVVSLLSKHLDQTQYRNLMMETGNTVFKFKKVVSLLSTNSGHGRVRKLKNDHFQSSLP 227
           C+RV+S L +  DQ QYRNLMMET   VFKFK+VVSLL+   GH RVRK +    +SSLP
Sbjct: 15  CHRVLSFLCQPQDQVQYRNLMMETEEAVFKFKRVVSLLNNGFGHERVRKFR--RLRSSLP 72

Query: 226 QNIFLDSPTTLKGFSTQTLQL-----LDKPYIDLNSTAKTTMQLTSKKILESSVLDRGSV 62
           Q+IFL++P      S + LQL     L+ P  +++S AK+++Q+T K  LES   D  S 
Sbjct: 73  QSIFLETPNYKPNPSPKPLQLLPTNFLENPLPEIDSKAKSSLQITPKIFLESQASDIVSS 132

Query: 61  SKSSFNLTQQHPPSTPYQ 8
            K    + QQ  PS  YQ
Sbjct: 133 VKPPLQIVQQ-KPSQHYQ 149


Top