BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016803
         (672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEK21856.2| ribulose-1,5-bisphosphate carboxylase/oxygenase l...    67   4e-09
gb|AEK21859.1| ribulose-1,5-bisphosphate carboxylase/oxygenase l...    67   4e-09
gb|AEK21845.1| ribulose-1,5-bisphosphate carboxylase/oxygenase l...    67   4e-09
gb|ACS73577.1| ribulose-1,5-bisphosphate carboxylase/oxygenase l...    67   4e-09
gb|AAY33020.1| ribulose-1,5-bisphosphate carboxylase/oxygenase l...    67   4e-09

>gb|AEK21856.2| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit,
           partial [Coptis teeta] gi|354549680|gb|AEK21846.2|
           ribulose-1,5-bisphosphate carboxylase/oxygenase large
           subunit, partial [Coptis chinensis]
           gi|361073073|gb|AEW10542.1| ribulose-1,5-bisphosphate
           carboxylase/oxygenase large subunit [Coptis chinensis
           var. brevisepala] gi|361073075|gb|AEW10543.1|
           ribulose-1,5-bisphosphate carboxylase/oxygenase large
           subunit [Coptis omeiensis] gi|361073077|gb|AEW10544.1|
           ribulose-1,5-bisphosphate carboxylase/oxygenase large
           subunit [Coptis teeta]
          Length = 223

 Score = 66.6 bits (161), Expect = 4e-09
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = -2

Query: 137 NYKLTYYTPQYTPKDIDTLAAFRVTPQPGVP 45
           +YKLTYYTPQYTPKD DTLAAFRVTPQPGVP
Sbjct: 1   DYKLTYYTPQYTPKDTDTLAAFRVTPQPGVP 31


>gb|AEK21859.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
           [Coptis teeta]
          Length = 202

 Score = 66.6 bits (161), Expect = 4e-09
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = -2

Query: 137 NYKLTYYTPQYTPKDIDTLAAFRVTPQPGVP 45
           +YKLTYYTPQYTPKD DTLAAFRVTPQPGVP
Sbjct: 1   DYKLTYYTPQYTPKDTDTLAAFRVTPQPGVP 31


>gb|AEK21845.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
           [Coptis chinensis] gi|339897333|gb|AEK21847.1|
           ribulose-1,5-bisphosphate carboxylase/oxygenase large
           subunit [Coptis chinensis var. brevisepala]
           gi|339897335|gb|AEK21848.1| ribulose-1,5-bisphosphate
           carboxylase/oxygenase large subunit [Coptis deltoidea]
           gi|339897337|gb|AEK21849.1| ribulose-1,5-bisphosphate
           carboxylase/oxygenase large subunit [Coptis deltoidea]
           gi|339897339|gb|AEK21850.1| ribulose-1,5-bisphosphate
           carboxylase/oxygenase large subunit [Coptis deltoidea]
           gi|339897341|gb|AEK21851.1| ribulose-1,5-bisphosphate
           carboxylase/oxygenase large subunit [Coptis deltoidea]
           gi|339897343|gb|AEK21852.1| ribulose-1,5-bisphosphate
           carboxylase/oxygenase large subunit [Coptis deltoidea]
           gi|339897345|gb|AEK21853.1| ribulose-1,5-bisphosphate
           carboxylase/oxygenase large subunit [Coptis omeiensis]
           gi|339897347|gb|AEK21854.1| ribulose-1,5-bisphosphate
           carboxylase/oxygenase large subunit [Coptis omeiensis]
           gi|339897349|gb|AEK21855.1| ribulose-1,5-bisphosphate
           carboxylase/oxygenase large subunit [Coptis omeiensis]
           gi|339897355|gb|AEK21857.1| ribulose-1,5-bisphosphate
           carboxylase/oxygenase large subunit [Coptis teeta]
           gi|339897357|gb|AEK21858.1| ribulose-1,5-bisphosphate
           carboxylase/oxygenase large subunit [Coptis teeta]
          Length = 205

 Score = 66.6 bits (161), Expect = 4e-09
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = -2

Query: 137 NYKLTYYTPQYTPKDIDTLAAFRVTPQPGVP 45
           +YKLTYYTPQYTPKD DTLAAFRVTPQPGVP
Sbjct: 4   DYKLTYYTPQYTPKDTDTLAAFRVTPQPGVP 34


>gb|ACS73577.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
           [Coptis chinensis]
          Length = 463

 Score = 66.6 bits (161), Expect = 4e-09
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = -2

Query: 137 NYKLTYYTPQYTPKDIDTLAAFRVTPQPGVP 45
           +YKLTYYTPQYTPKD DTLAAFRVTPQPGVP
Sbjct: 7   DYKLTYYTPQYTPKDTDTLAAFRVTPQPGVP 37


>gb|AAY33020.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
           [Coptis chinensis]
          Length = 463

 Score = 66.6 bits (161), Expect = 4e-09
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = -2

Query: 137 NYKLTYYTPQYTPKDIDTLAAFRVTPQPGVP 45
           +YKLTYYTPQYTPKD DTLAAFRVTPQPGVP
Sbjct: 7   DYKLTYYTPQYTPKDTDTLAAFRVTPQPGVP 37