BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016794
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat...   124   6e-27
ref|XP_003518162.1| PREDICTED: putative pentatricopeptide repeat...   123   2e-26
ref|XP_002308333.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_002333469.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_002524089.1| pentatricopeptide repeat-containing protein,...   114   6e-24

>ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g06400, mitochondrial-like [Vitis vinifera]
          Length = 1048

 Score =  124 bits (312), Expect = 6e-27
 Identities = 58/83 (69%), Positives = 70/83 (84%)
 Frame = -3

Query: 311  PNRSTYKFLIVLLCGKKGRKVDKAIKTFHQMISAGYIPDKELIEIYLNCLCEEGKLSDAR 132
            PN STYK+LI+ LCG+KGRKVD+AIKTF +MI AGY+PDKEL+E YL CLCE GKL DAR
Sbjct: 765  PNGSTYKYLIICLCGRKGRKVDEAIKTFLEMIRAGYVPDKELVESYLKCLCEVGKLLDAR 824

Query: 131  QCMDSLRKGGFGVPLSYSLVIRS 63
            +C ++L K GF +PLSYSL IR+
Sbjct: 825  RCTEALCKLGFTIPLSYSLYIRA 847


>ref|XP_003518162.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g06400, mitochondrial-like [Glycine max]
          Length = 1034

 Score =  123 bits (308), Expect = 2e-26
 Identities = 56/83 (67%), Positives = 70/83 (84%)
 Frame = -3

Query: 311 PNRSTYKFLIVLLCGKKGRKVDKAIKTFHQMISAGYIPDKELIEIYLNCLCEEGKLSDAR 132
           P+RSTYK+LI+ LCG+KGRKVD A+K + +MISAGY+PDKELIE YL CLCE G++ DAR
Sbjct: 749 PSRSTYKYLIIALCGRKGRKVDDALKIYGEMISAGYVPDKELIETYLGCLCEVGRVLDAR 808

Query: 131 QCMDSLRKGGFGVPLSYSLVIRS 63
           +C DSL+  G+ VPLSYSL IR+
Sbjct: 809 RCTDSLQNFGYTVPLSYSLFIRA 831


>ref|XP_002308333.1| predicted protein [Populus trichocarpa] gi|222854309|gb|EEE91856.1|
            predicted protein [Populus trichocarpa]
          Length = 1048

 Score =  116 bits (291), Expect = 2e-24
 Identities = 55/83 (66%), Positives = 67/83 (80%)
 Frame = -3

Query: 311  PNRSTYKFLIVLLCGKKGRKVDKAIKTFHQMISAGYIPDKELIEIYLNCLCEEGKLSDAR 132
            PN STYK+LI+ LCG+KGRKVD+AIK F +MI AG++PDKEL+  YL CLCE GKL +AR
Sbjct: 764  PNDSTYKYLIIFLCGRKGRKVDEAIKIFREMIRAGHVPDKELVGTYLCCLCEVGKLLEAR 823

Query: 131  QCMDSLRKGGFGVPLSYSLVIRS 63
            + +DSL K GF VP SYSL IR+
Sbjct: 824  KSVDSLCKAGFTVPASYSLYIRA 846


>ref|XP_002333469.1| predicted protein [Populus trichocarpa] gi|222836989|gb|EEE75382.1|
            predicted protein [Populus trichocarpa]
          Length = 1048

 Score =  116 bits (291), Expect = 2e-24
 Identities = 55/83 (66%), Positives = 67/83 (80%)
 Frame = -3

Query: 311  PNRSTYKFLIVLLCGKKGRKVDKAIKTFHQMISAGYIPDKELIEIYLNCLCEEGKLSDAR 132
            PN STYK+LI+ LCG+KGRKVD+AIK F +MI AG++PDKEL+  YL CLCE GKL +AR
Sbjct: 764  PNDSTYKYLIIFLCGRKGRKVDEAIKIFREMIRAGHVPDKELVGTYLCCLCEVGKLLEAR 823

Query: 131  QCMDSLRKGGFGVPLSYSLVIRS 63
            + +DSL K GF VP SYSL IR+
Sbjct: 824  KSVDSLCKAGFTVPASYSLYIRA 846


>ref|XP_002524089.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223536657|gb|EEF38299.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1072

 Score =  114 bits (286), Expect = 6e-24
 Identities = 52/83 (62%), Positives = 68/83 (81%)
 Frame = -3

Query: 311  PNRSTYKFLIVLLCGKKGRKVDKAIKTFHQMISAGYIPDKELIEIYLNCLCEEGKLSDAR 132
            PN STYK+L++ LCGKKGRKVD+AIK FH+MI   YIPD+E++  YL+CLCE G+LS+AR
Sbjct: 787  PNDSTYKYLLISLCGKKGRKVDEAIKIFHEMIRTRYIPDREVVGTYLSCLCEAGRLSEAR 846

Query: 131  QCMDSLRKGGFGVPLSYSLVIRS 63
            +  DSL + G+ +PLSYSL IR+
Sbjct: 847  KSTDSLCRIGYTIPLSYSLYIRA 869