BLASTX nr result

ID: Coptis23_contig00016789 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016789
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281228.1| PREDICTED: RNA-binding protein 8A [Vitis vin...    73   2e-11
gb|ABB91897.1| Y14 protein [Taiwania cryptomerioides]                  70   2e-10
gb|ABK25331.1| unknown [Picea sitchensis] gi|224284327|gb|ACN398...    70   2e-10
ref|XP_003568971.1| PREDICTED: RNA-binding protein 8A-like [Brac...    67   2e-09
emb|CAC85245.1| salt tolerance protein 4 [Beta vulgaris]               66   3e-09

>ref|XP_002281228.1| PREDICTED: RNA-binding protein 8A [Vitis vinifera]
           gi|296088561|emb|CBI37552.3| unnamed protein product
           [Vitis vinifera]
          Length = 202

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 36/47 (76%), Positives = 39/47 (82%)
 Frame = +3

Query: 3   GYALIEYERFEEAQTAISESNGVDLLGQTLSVDWAFSNGPFFKKRNM 143
           GYALIEYE  EEAQ AIS  NG +LL QT+SVDWAFSNGP FK+RNM
Sbjct: 140 GYALIEYENLEEAQAAISAMNGTELLTQTISVDWAFSNGP-FKRRNM 185


>gb|ABB91897.1| Y14 protein [Taiwania cryptomerioides]
          Length = 216

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 32/46 (69%), Positives = 36/46 (78%)
 Frame = +3

Query: 3   GYALIEYERFEEAQTAISESNGVDLLGQTLSVDWAFSNGPFFKKRN 140
           GYALIEYE F EAQ AI   NG +LL QT+SVDWAFSNGPF ++ N
Sbjct: 152 GYALIEYETFNEAQAAIENLNGAELLTQTISVDWAFSNGPFRRRNN 197


>gb|ABK25331.1| unknown [Picea sitchensis] gi|224284327|gb|ACN39899.1| unknown
           [Picea sitchensis]
          Length = 205

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/44 (72%), Positives = 37/44 (84%)
 Frame = +3

Query: 3   GYALIEYERFEEAQTAISESNGVDLLGQTLSVDWAFSNGPFFKK 134
           GYALIEYE F+EAQ AI+  NG +LL QT+SVDWAFSNGPF +K
Sbjct: 141 GYALIEYETFKEAQAAITNLNGAELLTQTISVDWAFSNGPFRRK 184


>ref|XP_003568971.1| PREDICTED: RNA-binding protein 8A-like [Brachypodium distachyon]
          Length = 207

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 33/46 (71%), Positives = 37/46 (80%)
 Frame = +3

Query: 3   GYALIEYERFEEAQTAISESNGVDLLGQTLSVDWAFSNGPFFKKRN 140
           GYALIEYE FEEAQ AI  S+G +LL Q +SVDWAFSNGP  K+RN
Sbjct: 144 GYALIEYENFEEAQAAIKASDGTELLTQIISVDWAFSNGP-AKRRN 188


>emb|CAC85245.1| salt tolerance protein 4 [Beta vulgaris]
          Length = 203

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 29/46 (63%), Positives = 36/46 (78%)
 Frame = +3

Query: 3   GYALIEYERFEEAQTAISESNGVDLLGQTLSVDWAFSNGPFFKKRN 140
           GYALIEYE+FEEAQ AI E NG  +L Q ++VDWAF NGP+ ++ N
Sbjct: 141 GYALIEYEKFEEAQAAIKEMNGAKMLEQPINVDWAFCNGPYRRRGN 186


Top