BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016778
         (929 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282354.1| PREDICTED: splicing factor 3B subunit 3-like...   237   3e-86
emb|CBI33172.3| unnamed protein product [Vitis vinifera]              237   3e-86
dbj|BAD10377.1| putative splicing factor 3b, subunit 3, 130kDa [...   237   7e-85
ref|XP_002451507.1| hypothetical protein SORBIDRAFT_04g003000 [S...   236   7e-85
gb|EAZ21672.1| hypothetical protein OsJ_05303 [Oryza sativa Japo...   237   7e-85

>ref|XP_002282354.1| PREDICTED: splicing factor 3B subunit 3-like [Vitis vinifera]
          Length = 1214

 Score =  237 bits (604), Expect(2) = 3e-86
 Identities = 116/150 (77%), Positives = 131/150 (87%)
 Frame = -3

Query: 705  EDPTGGKIK*EEGKLNGAPSKVEEIVQFHVGDTITCLEKTSLILGGHECIVYGTAMGCIG 526
            EDPTGGKIK E+GKLNGAP+KVEEIVQFHVGD +TCL+K SLI GG ECI+YGT MG +G
Sbjct: 1066 EDPTGGKIKWEQGKLNGAPNKVEEIVQFHVGDVVTCLQKASLIPGGGECIIYGTVMGSLG 1125

Query: 525  ALQPLTFREDIELFSCLEMNMRQEHPPLCGRDHLAYRSAYFPVKNVIDGDLCEQFSTLSP 346
            AL   T R+D++ FS LEM+MRQEHPPLCGRDH+AYRSAYFPVK+VIDGDLCEQF TL  
Sbjct: 1126 ALLAFTSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPL 1185

Query: 345  VVQKKIADELDRRTPQEILKKLEDVRNKII 256
             +Q+KIADELD RTP EILKKLE+VRNKII
Sbjct: 1186 DLQRKIADELD-RTPGEILKKLEEVRNKII 1214



 Score =  108 bits (271), Expect(2) = 3e-86
 Identities = 47/62 (75%), Positives = 55/62 (88%)
 Frame = -1

Query: 887  KSFHYCKYRRDENQIYNFANDSLPRWLTASYRIDFDMMAGADKFGNIYFTGIPQHISDGI 708
            +SFHYCKYRRDENQ+Y FA+DS+PRWLTASY IDFD MAGADKFGNIYF  +PQ +SD +
Sbjct: 1005 ESFHYCKYRRDENQLYIFADDSVPRWLTASYHIDFDTMAGADKFGNIYFVRLPQDVSDEV 1064

Query: 707  EK 702
            E+
Sbjct: 1065 EE 1066


>emb|CBI33172.3| unnamed protein product [Vitis vinifera]
          Length = 934

 Score =  237 bits (604), Expect(2) = 3e-86
 Identities = 116/150 (77%), Positives = 131/150 (87%)
 Frame = -3

Query: 705  EDPTGGKIK*EEGKLNGAPSKVEEIVQFHVGDTITCLEKTSLILGGHECIVYGTAMGCIG 526
            EDPTGGKIK E+GKLNGAP+KVEEIVQFHVGD +TCL+K SLI GG ECI+YGT MG +G
Sbjct: 786  EDPTGGKIKWEQGKLNGAPNKVEEIVQFHVGDVVTCLQKASLIPGGGECIIYGTVMGSLG 845

Query: 525  ALQPLTFREDIELFSCLEMNMRQEHPPLCGRDHLAYRSAYFPVKNVIDGDLCEQFSTLSP 346
            AL   T R+D++ FS LEM+MRQEHPPLCGRDH+AYRSAYFPVK+VIDGDLCEQF TL  
Sbjct: 846  ALLAFTSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPL 905

Query: 345  VVQKKIADELDRRTPQEILKKLEDVRNKII 256
             +Q+KIADELD RTP EILKKLE+VRNKII
Sbjct: 906  DLQRKIADELD-RTPGEILKKLEEVRNKII 934



 Score =  108 bits (271), Expect(2) = 3e-86
 Identities = 47/62 (75%), Positives = 55/62 (88%)
 Frame = -1

Query: 887 KSFHYCKYRRDENQIYNFANDSLPRWLTASYRIDFDMMAGADKFGNIYFTGIPQHISDGI 708
           +SFHYCKYRRDENQ+Y FA+DS+PRWLTASY IDFD MAGADKFGNIYF  +PQ +SD +
Sbjct: 725 ESFHYCKYRRDENQLYIFADDSVPRWLTASYHIDFDTMAGADKFGNIYFVRLPQDVSDEV 784

Query: 707 EK 702
           E+
Sbjct: 785 EE 786


>dbj|BAD10377.1| putative splicing factor 3b, subunit 3, 130kDa [Oryza sativa Japonica
            Group] gi|42409258|dbj|BAD10521.1| putative splicing
            factor 3b, subunit 3, 130kDa [Oryza sativa Japonica
            Group] gi|125538000|gb|EAY84395.1| hypothetical protein
            OsI_05771 [Oryza sativa Indica Group]
          Length = 1234

 Score =  237 bits (604), Expect(2) = 7e-85
 Identities = 114/150 (76%), Positives = 131/150 (87%)
 Frame = -3

Query: 705  EDPTGGKIK*EEGKLNGAPSKVEEIVQFHVGDTITCLEKTSLILGGHECIVYGTAMGCIG 526
            EDPTGGKIK E+GKLNGAP+KVEEIVQFHVGD +TCL+K SLI GG EC++YGT MG +G
Sbjct: 1086 EDPTGGKIKWEQGKLNGAPNKVEEIVQFHVGDVVTCLQKASLIPGGGECLIYGTVMGSVG 1145

Query: 525  ALQPLTFREDIELFSCLEMNMRQEHPPLCGRDHLAYRSAYFPVKNVIDGDLCEQFSTLSP 346
            AL   T RED++ FS LEM++RQEHPPLCGRDH+AYRSAYFPVK+VIDGDLCEQF +L  
Sbjct: 1146 ALLAFTSREDVDFFSHLEMHLRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPSLPA 1205

Query: 345  VVQKKIADELDRRTPQEILKKLEDVRNKII 256
             +Q+KIADELD RTP EILKKLED+RNKII
Sbjct: 1206 DMQRKIADELD-RTPGEILKKLEDIRNKII 1234



 Score =  104 bits (259), Expect(2) = 7e-85
 Identities = 46/62 (74%), Positives = 54/62 (87%)
 Frame = -1

Query: 887  KSFHYCKYRRDENQIYNFANDSLPRWLTASYRIDFDMMAGADKFGNIYFTGIPQHISDGI 708
            +SFHYCKYRRDENQ+Y FA+DS+PRWLTA+  IDFD MAGADKFGNIYF  +PQ +SD I
Sbjct: 1025 ESFHYCKYRRDENQLYIFADDSVPRWLTAANHIDFDTMAGADKFGNIYFARLPQDLSDEI 1084

Query: 707  EK 702
            E+
Sbjct: 1085 EE 1086


>ref|XP_002451507.1| hypothetical protein SORBIDRAFT_04g003000 [Sorghum bicolor]
            gi|241931338|gb|EES04483.1| hypothetical protein
            SORBIDRAFT_04g003000 [Sorghum bicolor]
          Length = 1232

 Score =  236 bits (601), Expect(2) = 7e-85
 Identities = 113/150 (75%), Positives = 131/150 (87%)
 Frame = -3

Query: 705  EDPTGGKIK*EEGKLNGAPSKVEEIVQFHVGDTITCLEKTSLILGGHECIVYGTAMGCIG 526
            EDPTGGKIK E+GKLNGAP+KVEEIVQFHVGD +TCL+K SLI GG EC++YGT MG +G
Sbjct: 1084 EDPTGGKIKWEQGKLNGAPNKVEEIVQFHVGDVVTCLQKASLIPGGGECLIYGTVMGSVG 1143

Query: 525  ALQPLTFREDIELFSCLEMNMRQEHPPLCGRDHLAYRSAYFPVKNVIDGDLCEQFSTLSP 346
            AL   T RED++ FS LEM++RQEHPPLCGRDH+AYRSAYFPVK+VIDGDLCEQ+ +L  
Sbjct: 1144 ALLAFTSREDVDFFSHLEMHLRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQYPSLPA 1203

Query: 345  VVQKKIADELDRRTPQEILKKLEDVRNKII 256
             +Q+KIADELD RTP EILKKLED+RNKII
Sbjct: 1204 DMQRKIADELD-RTPGEILKKLEDIRNKII 1232



 Score =  105 bits (262), Expect(2) = 7e-85
 Identities = 47/62 (75%), Positives = 54/62 (87%)
 Frame = -1

Query: 887  KSFHYCKYRRDENQIYNFANDSLPRWLTASYRIDFDMMAGADKFGNIYFTGIPQHISDGI 708
            +SFHYCKYRRDENQ+Y FA+DS+PRWLTA+  IDFD MAGADKFGNIYF  +PQ ISD I
Sbjct: 1023 ESFHYCKYRRDENQLYIFADDSVPRWLTAAQHIDFDTMAGADKFGNIYFARLPQDISDEI 1082

Query: 707  EK 702
            E+
Sbjct: 1083 EE 1084


>gb|EAZ21672.1| hypothetical protein OsJ_05303 [Oryza sativa Japonica Group]
          Length = 1224

 Score =  237 bits (604), Expect(2) = 7e-85
 Identities = 114/150 (76%), Positives = 131/150 (87%)
 Frame = -3

Query: 705  EDPTGGKIK*EEGKLNGAPSKVEEIVQFHVGDTITCLEKTSLILGGHECIVYGTAMGCIG 526
            EDPTGGKIK E+GKLNGAP+KVEEIVQFHVGD +TCL+K SLI GG EC++YGT MG +G
Sbjct: 1076 EDPTGGKIKWEQGKLNGAPNKVEEIVQFHVGDVVTCLQKASLIPGGGECLIYGTVMGSVG 1135

Query: 525  ALQPLTFREDIELFSCLEMNMRQEHPPLCGRDHLAYRSAYFPVKNVIDGDLCEQFSTLSP 346
            AL   T RED++ FS LEM++RQEHPPLCGRDH+AYRSAYFPVK+VIDGDLCEQF +L  
Sbjct: 1136 ALLAFTSREDVDFFSHLEMHLRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPSLPA 1195

Query: 345  VVQKKIADELDRRTPQEILKKLEDVRNKII 256
             +Q+KIADELD RTP EILKKLED+RNKII
Sbjct: 1196 DMQRKIADELD-RTPGEILKKLEDIRNKII 1224



 Score =  104 bits (259), Expect(2) = 7e-85
 Identities = 46/62 (74%), Positives = 54/62 (87%)
 Frame = -1

Query: 887  KSFHYCKYRRDENQIYNFANDSLPRWLTASYRIDFDMMAGADKFGNIYFTGIPQHISDGI 708
            +SFHYCKYRRDENQ+Y FA+DS+PRWLTA+  IDFD MAGADKFGNIYF  +PQ +SD I
Sbjct: 1015 ESFHYCKYRRDENQLYIFADDSVPRWLTAANHIDFDTMAGADKFGNIYFARLPQDLSDEI 1074

Query: 707  EK 702
            E+
Sbjct: 1075 EE 1076