BLASTX nr result

ID: Coptis23_contig00016777 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016777
         (902 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280751.1| PREDICTED: uncharacterized protein LOC100266...   261   2e-67
ref|XP_002280761.1| PREDICTED: uncharacterized protein LOC100266...   255   1e-65
ref|XP_003610894.1| hypothetical protein MTR_5g008220 [Medicago ...   213   5e-53
ref|XP_002518899.1| conserved hypothetical protein [Ricinus comm...   211   2e-52
ref|XP_002303688.1| predicted protein [Populus trichocarpa] gi|2...   210   3e-52

>ref|XP_002280751.1| PREDICTED: uncharacterized protein LOC100266795 isoform 1 [Vitis
           vinifera] gi|147827011|emb|CAN62288.1| hypothetical
           protein VITISV_034705 [Vitis vinifera]
           gi|297742428|emb|CBI34577.3| unnamed protein product
           [Vitis vinifera]
          Length = 252

 Score =  261 bits (666), Expect = 2e-67
 Identities = 129/215 (60%), Positives = 159/215 (73%)
 Frame = +2

Query: 191 SKYQLLIQKPNQRKKKRGCFKCRAELMQDAPFAIAIGTCVLNSLVFPLPKXXXXXXXXXX 370
           S +  L +  +QR+ ++G   CRAEL QDAPFAIAIG C+LNSLVFP+            
Sbjct: 31  SSFPNLRKSFHQRRIRKGA--CRAELSQDAPFAIAIGACMLNSLVFPITSGADDDGDTVI 88

Query: 371 XXXXARFAVMGIISFIPYFNWLSWIFAWLDTGSKRYVVYSIVYLAPYLRTNLSLSPEESW 550
               ARFAVMGIISFIPYFNWLSW+FAW+DTG +RY++YSIVYLAPYLR+NLSL PE+SW
Sbjct: 89  DSTDARFAVMGIISFIPYFNWLSWVFAWMDTGKRRYIIYSIVYLAPYLRSNLSLLPEDSW 148

Query: 551 LPIASIFFCIIHIQLEASIRNGDLQGFQIFNEALKYGSPLAKKNNADLKIDEGISKKGRK 730
           LPIASI FCIIHIQLEASIRNGD+QGFQ+F+   K+ S +  K N  LK  +G +K+G++
Sbjct: 149 LPIASIVFCIIHIQLEASIRNGDIQGFQLFSGVEKHLSSITGKKNT-LKDHQGTTKEGKR 207

Query: 731 QERQELPSANEQSRNELHGWGVPEKPDKQTEETGD 835
           +E   LPSA EQSRNE+  WGVP KP ++ E   +
Sbjct: 208 KEHTGLPSAEEQSRNEIRQWGVPRKPSQEPEHLNE 242


>ref|XP_002280761.1| PREDICTED: uncharacterized protein LOC100266795 isoform 2 [Vitis
           vinifera]
          Length = 260

 Score =  255 bits (651), Expect = 1e-65
 Identities = 130/223 (58%), Positives = 159/223 (71%), Gaps = 8/223 (3%)
 Frame = +2

Query: 191 SKYQLLIQKPNQRKKKRGCFKCRAELMQDAPFAIAIGTCVLNSLVFPLPKXXXXXXXXXX 370
           S +  L +  +QR+ ++G   CRAEL QDAPFAIAIG C+LNSLVFP+            
Sbjct: 31  SSFPNLRKSFHQRRIRKGA--CRAELSQDAPFAIAIGACMLNSLVFPITSGADDDGDTVI 88

Query: 371 XXXXARFAVMGIISFIPYFNWLSWIFAWLDTGSKRYVVYSIVYLAPYLRTNLSLSPEESW 550
               ARFAVMGIISFIPYFNWLSW+FAW+DTG +RY++YSIVYLAPYLR+NLSL PE+SW
Sbjct: 89  DSTDARFAVMGIISFIPYFNWLSWVFAWMDTGKRRYIIYSIVYLAPYLRSNLSLLPEDSW 148

Query: 551 LPIASIFFCIIHIQLEASIRNGDLQGFQIFNEALKYGSPLAKKNNADLKIDEGISK---- 718
           LPIASI FCIIHIQLEASIRNGD+QGFQ+F+   K+ S +  K N  LK  +G +K    
Sbjct: 149 LPIASIVFCIIHIQLEASIRNGDIQGFQLFSGVEKHLSSITGKKNT-LKDHQGTTKEHSQ 207

Query: 719 ----KGRKQERQELPSANEQSRNELHGWGVPEKPDKQTEETGD 835
               KG+++E   LPSA EQSRNE+  WGVP KP ++ E   +
Sbjct: 208 LFYVKGKRKEHTGLPSAEEQSRNEIRQWGVPRKPSQEPEHLNE 250


>ref|XP_003610894.1| hypothetical protein MTR_5g008220 [Medicago truncatula]
           gi|355512229|gb|AES93852.1| hypothetical protein
           MTR_5g008220 [Medicago truncatula]
          Length = 255

 Score =  213 bits (542), Expect = 5e-53
 Identities = 106/195 (54%), Positives = 133/195 (68%)
 Frame = +2

Query: 254 CRAELMQDAPFAIAIGTCVLNSLVFPLPKXXXXXXXXXXXXXXARFAVMGIISFIPYFNW 433
           C+A  + DAPFA AIG C+L SL+ P+P                R AVMGI+SFIPYFNW
Sbjct: 53  CKAVFVDDAPFAAAIGACMLTSLILPVPVATEEEEESSLTSTDTRLAVMGIMSFIPYFNW 112

Query: 434 LSWIFAWLDTGSKRYVVYSIVYLAPYLRTNLSLSPEESWLPIASIFFCIIHIQLEASIRN 613
           LSW+FAWLDTG++RY VYS+VYLAPYLR+NLS+SPE+SWLPIASI FCI+HIQLEASIRN
Sbjct: 113 LSWVFAWLDTGNRRYAVYSLVYLAPYLRSNLSISPEDSWLPIASILFCIVHIQLEASIRN 172

Query: 614 GDLQGFQIFNEALKYGSPLAKKNNADLKIDEGISKKGRKQERQELPSANEQSRNELHGWG 793
           GD+QGFQ+F   +   S  +KK     +  E    KG K E++ L SA E SR ++ GW 
Sbjct: 173 GDVQGFQLFRNVMDQQSSSSKKKGRLNRHQE--MSKGSKNEKKNLLSAEEPSR-DIGGWE 229

Query: 794 VPEKPDKQTEETGDT 838
             ++P +  +   DT
Sbjct: 230 DSQRPVEYQQRLHDT 244


>ref|XP_002518899.1| conserved hypothetical protein [Ricinus communis]
           gi|223541886|gb|EEF43432.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 248

 Score =  211 bits (537), Expect = 2e-52
 Identities = 112/210 (53%), Positives = 142/210 (67%)
 Frame = +2

Query: 200 QLLIQKPNQRKKKRGCFKCRAELMQDAPFAIAIGTCVLNSLVFPLPKXXXXXXXXXXXXX 379
           ++LI+K + + K      CRAE  +DAPFA AIG C+L+SL+ P                
Sbjct: 35  RVLIKKKSLKNKGI----CRAEFSRDAPFAAAIGACMLSSLLLPNAVNTDDDGDSAIDST 90

Query: 380 XARFAVMGIISFIPYFNWLSWIFAWLDTGSKRYVVYSIVYLAPYLRTNLSLSPEESWLPI 559
            AR   MGIISF+PYFNWLSW+FAWLDTG +RY VY++VYLAPYLR+N+SLSPEESWLP+
Sbjct: 91  DARLTAMGIISFVPYFNWLSWVFAWLDTGKRRYAVYALVYLAPYLRSNMSLSPEESWLPV 150

Query: 560 ASIFFCIIHIQLEASIRNGDLQGFQIFNEALKYGSPLAKKNNADLKIDEGISKKGRKQER 739
           ASI   IIH+QLEASI+NGD+QGFQ FNEA  +   L KK   +LK  + + ++GR QE 
Sbjct: 151 ASIVLGIIHVQLEASIKNGDIQGFQFFNEAANF---LTKKKEINLKDHQELYEEGR-QEH 206

Query: 740 QELPSANEQSRNELHGWGVPEKPDKQTEET 829
           + LPSA E+ RNE+   GV  K  K  E +
Sbjct: 207 ENLPSA-EELRNEIPKSGVHRKSSKHPENS 235


>ref|XP_002303688.1| predicted protein [Populus trichocarpa] gi|222841120|gb|EEE78667.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score =  210 bits (535), Expect = 3e-52
 Identities = 107/205 (52%), Positives = 139/205 (67%), Gaps = 3/205 (1%)
 Frame = +2

Query: 227 RKKKRGCFKCRAELMQDAPFAIAIGTCVLNSLVFP--LPKXXXXXXXXXXXXXXARFAVM 400
           ++KK     CRA L  D PFA+AI  C+L+SL+ P    K               R AVM
Sbjct: 40  KRKKFNRGICRAALSDDTPFAVAISVCMLSSLLLPNTATKDEEEESDSGITTTDTRIAVM 99

Query: 401 GIISFIPYFNWLSWIFAWLDTGSKRYVVYSIVYLAPYLRTNLSLSPEESWLPIASIFFCI 580
           GIISFIPYFNWLSW+FAWLDTG +RY +YS+VYLAPYLR+N+SLSPE+SWLPIASI F I
Sbjct: 100 GIISFIPYFNWLSWVFAWLDTGKRRYAIYSLVYLAPYLRSNMSLSPEDSWLPIASIIFGI 159

Query: 581 IHIQLEASIRNGDLQGFQIFNEALKYGSPLAKKNNADLKIDEGISKKGRKQERQELPSAN 760
           +H+QLEASI+NGD+QGFQ+F++A K+     KK +  L+  +   ++ R+ E   LP+A+
Sbjct: 160 VHVQLEASIKNGDVQGFQLFSKAAKFLPLPGKKKDIILREHQEPLEEEREGEHMNLPTAD 219

Query: 761 EQSRNELHGWGVPEK-PDKQTEETG 832
           +QSRNEL   GVP   P+ +    G
Sbjct: 220 KQSRNELRQRGVPRNHPENRAHSNG 244


Top