BLASTX nr result

ID: Coptis23_contig00016767 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016767
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22882.3| unnamed protein product [Vitis vinifera]               63   2e-08
emb|CAN76672.1| hypothetical protein VITISV_011789 [Vitis vinifera]    63   2e-08
ref|XP_002316043.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_002524902.1| hypothetical protein RCOM_0725500 [Ricinus c...    59   5e-07

>emb|CBI22882.3| unnamed protein product [Vitis vinifera]
          Length = 300

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 42/147 (28%), Positives = 63/147 (42%)
 Frame = -2

Query: 479 RYPFRYQINDGAIVGDDGYPGLLIKCSEYPYRLFINISNHIYHVQRIYYEAKIITVVDVD 300
           RYPF +Q       G  GYPG  I C        + +S   Y + +I Y    +T+  VD
Sbjct: 44  RYPFWHQDQPS---GYCGYPGFGISCGGDGSGPVLRLSGDAYSIMKINYSENTLTLRYVD 100

Query: 299 IEKEECPLPRRNVSLEYIPSLGYYSELASMNIFYNCTNIGNVEQALPCLEXXXXXXXNTS 120
           I    CP     V+L+   +  Y +    +  FYNCT       ++ CL          +
Sbjct: 101 INNGSCPRAPHGVTLDNSSAFSYTARNNMLRFFYNCTLYPPSLPSMECLRHG-------T 153

Query: 119 QRSYAFVRDNIPKGFNWYRNCEESVEV 39
           +RSY F+   +P+ F+W   CE +  V
Sbjct: 154 KRSYVFIVGAVPE-FDWSGYCETTATV 179


>emb|CAN76672.1| hypothetical protein VITISV_011789 [Vitis vinifera]
          Length = 276

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 42/147 (28%), Positives = 63/147 (42%)
 Frame = -2

Query: 479 RYPFRYQINDGAIVGDDGYPGLLIKCSEYPYRLFINISNHIYHVQRIYYEAKIITVVDVD 300
           RYPF +Q       G  GYPG  I C        + +S   Y + +I Y    +T+  VD
Sbjct: 44  RYPFWHQDQPS---GYCGYPGFGISCGGDGSGPVLRLSGDAYSIMKINYSENTLTLRYVD 100

Query: 299 IEKEECPLPRRNVSLEYIPSLGYYSELASMNIFYNCTNIGNVEQALPCLEXXXXXXXNTS 120
           I    CP     V+L+   +  Y +    +  FYNCT       ++ CL          +
Sbjct: 101 INNGSCPRAPHGVTLDNSSAFSYTARNNMLRFFYNCTLYPPSLPSMECLRHG-------T 153

Query: 119 QRSYAFVRDNIPKGFNWYRNCEESVEV 39
           +RSY F+   +P+ F+W   CE +  V
Sbjct: 154 KRSYVFIVGAVPE-FDWSGYCETTATV 179


>ref|XP_002316043.1| predicted protein [Populus trichocarpa] gi|222865083|gb|EEF02214.1|
           predicted protein [Populus trichocarpa]
          Length = 297

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 3/152 (1%)
 Frame = -2

Query: 482 IRYPFRYQINDGAIVGDDGYPGLLIKCSEYPYRLFINISNHIYHVQRIYYEAKIITVVDV 303
           I YPF +Q          GYPG  I CS+    +++  SN +Y +  I + +K +T+   
Sbjct: 45  ISYPFWHQSQQ---FEHCGYPGFNISCSDQNPMIYL--SNDLYPITNINHSSKSLTLHHT 99

Query: 302 DIEKEECP-LPRRNVSLEYIPSLGYYSELAS--MNIFYNCTNIGNVEQALPCLEXXXXXX 132
            I + +CP  P   +++   PSL + S L +  ++ FYNCT        + CL+      
Sbjct: 100 KIRRADCPKAPHDTITVNSTPSL-FNSTLGNKMLHFFYNCTLYPPSLPHIACLQYGI--- 155

Query: 131 XNTSQRSYAFVRDNIPKGFNWYRNCEESVEVL 36
               ++SY F+    P+ F+W+R CE  V  L
Sbjct: 156 ----KQSYVFLEGATPE-FDWHRYCESVVSAL 182


>ref|XP_002524902.1| hypothetical protein RCOM_0725500 [Ricinus communis]
           gi|223535865|gb|EEF37526.1| hypothetical protein
           RCOM_0725500 [Ricinus communis]
          Length = 257

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 33/99 (33%), Positives = 56/99 (56%)
 Frame = -2

Query: 482 IRYPFRYQINDGAIVGDDGYPGLLIKCSEYPYRLFINISNHIYHVQRIYYEAKIITVVDV 303
           I+YPF Y+ N+       GYP L + CS     + + + N  Y+V+ I Y    IT+VD+
Sbjct: 45  IKYPFWYK-NNSTPDQYCGYPKLGLSCSNDDEPV-LGLPNDSYYVKNINYTDSTITLVDI 102

Query: 302 DIEKEECPLPRRNVSLEYIPSLGYYSELASMNIFYNCTN 186
           D+  + CP  R N++L+ +P L Y     +++ ++NCT+
Sbjct: 103 DVVGQTCPRARHNLTLDNLP-LNYTDLNLNLSFYFNCTS 140


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