BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016761
         (1137 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282373.1| PREDICTED: cytidine deaminase-like [Vitis vi...   402   e-110
ref|XP_004135706.1| PREDICTED: cytidine deaminase-like [Cucumis ...   401   e-109
ref|XP_002514140.1| cytidine deaminase 1, 2, 7, putative [Ricinu...   395   e-107
ref|XP_002308296.1| predicted protein [Populus trichocarpa] gi|2...   375   e-101
ref|NP_179547.1| cytidine deaminase 1 [Arabidopsis thaliana] gi|...   371   e-100

>ref|XP_002282373.1| PREDICTED: cytidine deaminase-like [Vitis vinifera]
          Length = 301

 Score =  402 bits (1033), Expect = e-110
 Identities = 203/301 (67%), Positives = 238/301 (79%)
 Frame = -2

Query: 1004 MDRPRFVIEATEVESMAKKSGVSILELLPSLVKSAKKLARPPISKYHVGAVGLGSNGRIF 825
            M+R RFVIEA+E ES A+K+G+++++LLPSLV SA+KLARPPISKYHVGAVGLGS+GRIF
Sbjct: 1    MERSRFVIEASEAESKAEKAGLTVMQLLPSLVNSAQKLARPPISKYHVGAVGLGSSGRIF 60

Query: 824  FGVNLEFPGLPLHQSVHAEQFLITNALINRESQINYFAVSSAPCGHCRQFLQEIRGATDI 645
             GVNLEFPGLPL+ SVHAEQFLITN  +  E+ +   AVS+APCGHCRQF QEIR A DI
Sbjct: 61   LGVNLEFPGLPLNHSVHAEQFLITNLSLKAETHLRCLAVSAAPCGHCRQFFQEIRDAPDI 120

Query: 644  KILITSSDNGEEEGGEFKPISGFLPHRFGPDDLLEKNVPLLLEPHDNGLVLVECNNVYSN 465
            K+LITSS + E     F+P+S FLP+RFGPDDLL+K+ PLLLEP +NGL LV        
Sbjct: 121  KVLITSSSDQE-----FRPLSEFLPNRFGPDDLLDKDTPLLLEPQNNGLSLVNAIGSQLV 175

Query: 464  GTYCNGNVDIGIGKLKIAAFEAANASHAPYSGCPSGVAIMDSDGKVYKGSYTESAAYNPS 285
             T CNG        LK  A EAAN SHAPYSGCPSGVA++DS+G+VY+GSY ESAAYNPS
Sbjct: 176  NTGCNGVCACDQDSLKYEALEAANKSHAPYSGCPSGVALIDSEGRVYRGSYMESAAYNPS 235

Query: 284  LGPIQAGLVAYVASGGGGYEKIVAGVLVEKEGAMVGQEGTARLLLKTISPQCDFRVFHCE 105
            LGP+QA LVAY+A GG GYE+IV  VLVEKE A V QE TARLLL  ISP+C+FRVF+C 
Sbjct: 236  LGPVQAALVAYIAGGGDGYEEIVGAVLVEKEEAQVKQEQTARLLLNLISPKCEFRVFYCS 295

Query: 104  S 102
            S
Sbjct: 296  S 296


>ref|XP_004135706.1| PREDICTED: cytidine deaminase-like [Cucumis sativus]
          Length = 304

 Score =  401 bits (1031), Expect = e-109
 Identities = 202/304 (66%), Positives = 237/304 (77%), Gaps = 5/304 (1%)
 Frame = -2

Query: 1004 MDRPRFVIEATEVESMAKKSGVSILELLPSLVKSAKKLARPPISKYHVGAVGLGSNGRIF 825
            MD  RFVIEA E ES+AK+S ++I  LLP+LVKSA+ LARPPISKYHVGAVGLGS+GR+F
Sbjct: 1    MDGTRFVIEAPEAESLAKQSALTIPLLLPTLVKSAQSLARPPISKYHVGAVGLGSSGRVF 60

Query: 824  FGVNLEFPGLPLHQSVHAEQFLITNALINRESQINYFAVSSAPCGHCRQFLQEIRGATDI 645
            FGVNLEFPGLPLHQSVHAEQFL+TN  +N ES +NY AVS+APCGHCRQFLQE+R + DI
Sbjct: 61   FGVNLEFPGLPLHQSVHAEQFLVTNLALNAESHLNYLAVSAAPCGHCRQFLQEVRSSADI 120

Query: 644  KILITSSDNGEEEGGEFK-----PISGFLPHRFGPDDLLEKNVPLLLEPHDNGLVLVECN 480
            KIL+  SD+G + G + K     P+  FLPHRFGP DLL K+VPLLLEP  NGL L   N
Sbjct: 121  KILV--SDSGSDSGSDSKPDVYVPLPQFLPHRFGPYDLLAKDVPLLLEPRFNGLSLP--N 176

Query: 479  NVYSNGTYCNGNVDIGIGKLKIAAFEAANASHAPYSGCPSGVAIMDSDGKVYKGSYTESA 300
                N   CNGN    + KLK AA +AAN SHAPYS CPSGVA+MD +G++Y G Y ESA
Sbjct: 177  ETAENNKLCNGNHGENLEKLKRAALDAANMSHAPYSKCPSGVALMDDNGRIYNGPYMESA 236

Query: 299  AYNPSLGPIQAGLVAYVASGGGGYEKIVAGVLVEKEGAMVGQEGTARLLLKTISPQCDFR 120
            AYNPS+GP+QA +VAY+A GG GYE+IVA VLVEK+G  V QE  ARLLL+TISP+C+F 
Sbjct: 237  AYNPSMGPVQAAIVAYIAGGGAGYERIVAAVLVEKDGVEVKQERAARLLLETISPECEFT 296

Query: 119  VFHC 108
            V HC
Sbjct: 297  VVHC 300


>ref|XP_002514140.1| cytidine deaminase 1, 2, 7, putative [Ricinus communis]
            gi|223546596|gb|EEF48094.1| cytidine deaminase 1, 2, 7,
            putative [Ricinus communis]
          Length = 311

 Score =  395 bits (1015), Expect = e-107
 Identities = 200/309 (64%), Positives = 247/309 (79%), Gaps = 8/309 (2%)
 Frame = -2

Query: 1004 MDRPRFVIEATEVESMAKKSGVSILELLPSLVKSAKKLARPPISKYHVGAVGLGSNGRIF 825
            M+ PRFVIEA+E ESMA+K+G++++ELLP+LVKSA+ LARPPIS Y+VGAVGLGS+GRIF
Sbjct: 1    MEPPRFVIEASEAESMAQKAGLTLVELLPTLVKSAQSLARPPISDYYVGAVGLGSSGRIF 60

Query: 824  FGVNLEFPGLPLHQSVHAEQFLITNALINRESQINYFAVSSAPCGHCRQFLQEIRGATDI 645
            FG NLEFPGLPLHQSVHAEQFLITN  +N ES + Y AVS+APCGHCRQF QEIR A DI
Sbjct: 61   FGANLEFPGLPLHQSVHAEQFLITNLFLNAESNLKYVAVSAAPCGHCRQFFQEIRDAPDI 120

Query: 644  KILIT----SSDNGEEEGGE---FKPISGFLPHRFGPDDLLEKNVPLLLEPHDNGLVLVE 486
            +ILIT    +++N ++  G+   F  +S  LP RFGP DLL+K+VPL+LE H+N + L +
Sbjct: 121  QILITGDSNNTNNNDQSNGDIKRFDTLSNLLPQRFGPYDLLDKSVPLVLEKHNNHMSL-Q 179

Query: 485  CNNVYSNGTYCNGNVDIGI-GKLKIAAFEAANASHAPYSGCPSGVAIMDSDGKVYKGSYT 309
             +++ +N       + I +   LK+ A EAAN+SHAPYS CPSGVA+MD +GKVYKGSY 
Sbjct: 180  NDDISNNSKKVPNGISISVFDDLKLEALEAANSSHAPYSKCPSGVALMDCEGKVYKGSYM 239

Query: 308  ESAAYNPSLGPIQAGLVAYVASGGGGYEKIVAGVLVEKEGAMVGQEGTARLLLKTISPQC 129
            ESAAYNPSLGP+QA +VAY+  GGGGYEKIVA VLVEKE A+V QE TARLLL+ ISP+C
Sbjct: 240  ESAAYNPSLGPVQAAIVAYLVGGGGGYEKIVAAVLVEKEEAVVRQEFTARLLLQVISPRC 299

Query: 128  DFRVFHCES 102
            +F+VFHC S
Sbjct: 300  EFKVFHCSS 308


>ref|XP_002308296.1| predicted protein [Populus trichocarpa] gi|222854272|gb|EEE91819.1|
            predicted protein [Populus trichocarpa]
          Length = 315

 Score =  375 bits (962), Expect = e-101
 Identities = 196/309 (63%), Positives = 233/309 (75%), Gaps = 8/309 (2%)
 Frame = -2

Query: 1004 MDRPRFVIEATEVESMAKKSGVSILELLPSLVKSAKKLARPPISKYHVGAVGLGSNGRIF 825
            MD P FVIEA+E ESMAK+SG+++L+LLP+LVKSA+ LARPPIS YHVGAVGLGS+GRIF
Sbjct: 1    MDGPIFVIEASEAESMAKQSGLTVLQLLPALVKSAQALARPPISDYHVGAVGLGSSGRIF 60

Query: 824  FGVNLEFPGLPLHQSVHAEQFLITNALINRESQINYFAVSSAPCGHCRQFLQEIRGATDI 645
             G NLEFPGLPLH SVHAEQFLITN  +N E  + Y AVS+APCGHCRQFLQEIR A D+
Sbjct: 61   LGGNLEFPGLPLHHSVHAEQFLITNLTLNAEPSLKYIAVSAAPCGHCRQFLQEIRHAPDV 120

Query: 644  KILIT-------SSDNGEEEGGEFKPISGFLPHRFGPDDLLEKNVPLLLEPHDNGLVLVE 486
            +ILIT       S  N      +F+P+S  LPHRFGPDDLL+K++PLLLE   N L  V 
Sbjct: 121  QILITGDSTNNQSYKNDLANKQQFEPLSCLLPHRFGPDDLLDKDIPLLLETRHNNLSFVG 180

Query: 485  CNNVYSNGTYCNGNVDIGIGKLKIAAFEAANASHAPYSGCPSGVAIMDSDGKVYKGSYTE 306
             + +  NG      +      L+  A EAAN SHAP++ CPSGVA+MD +GKVY+GSY E
Sbjct: 181  -DALLPNG------ICASFDDLENEALEAANKSHAPFTNCPSGVALMDCEGKVYRGSYME 233

Query: 305  SAAYNPSLGPIQAGLVAYVASG-GGGYEKIVAGVLVEKEGAMVGQEGTARLLLKTISPQC 129
            SAAYNPS+GP+QA LVAYV  G GGGY++IVA VLVEK+GA   QE TARLLLK ISP+C
Sbjct: 234  SAAYNPSIGPVQAALVAYVMGGRGGGYDRIVAAVLVEKQGAKARQEQTARLLLKEISPKC 293

Query: 128  DFRVFHCES 102
            + +VFHC S
Sbjct: 294  ELKVFHCGS 302


>ref|NP_179547.1| cytidine deaminase 1 [Arabidopsis thaliana]
            gi|6090835|gb|AAF03358.1|AF134487_1 cytidine deaminase 1
            [Arabidopsis thaliana] gi|3046700|emb|CAA06460.1|
            cytidine deaminase [Arabidopsis thaliana]
            gi|3093276|emb|CAA06671.1| cytidine deaminase
            [Arabidopsis thaliana] gi|4191787|gb|AAD10156.1| putative
            cytidine deaminase [Arabidopsis thaliana]
            gi|22135974|gb|AAM91569.1| putative cytidine deaminase
            [Arabidopsis thaliana] gi|30984516|gb|AAP42721.1|
            At2g19570 [Arabidopsis thaliana]
            gi|330251802|gb|AEC06896.1| cytidine deaminase 1
            [Arabidopsis thaliana]
          Length = 301

 Score =  371 bits (952), Expect = e-100
 Identities = 189/305 (61%), Positives = 232/305 (76%), Gaps = 6/305 (1%)
 Frame = -2

Query: 1004 MDRPRFVIEATEVESMAKKSGVSILELLPSLVKSAKKLARPPISKYHVGAVGLGSNGRIF 825
            MD+P FVI++ E ES AK+ GVS+++LLPSLVK A+  AR PISK++V  VGLGS+GRIF
Sbjct: 1    MDKPSFVIQSKEAESAAKQLGVSVIQLLPSLVKPAQSYARTPISKFNVAVVGLGSSGRIF 60

Query: 824  FGVNLEFPGLPLHQSVHAEQFLITNALINRESQINYFAVSSAPCGHCRQFLQEIRGATDI 645
             GVN+EFP LPLH S+HAEQFL+TN  +N E  +N+FAVS+APCGHCRQFLQEIR A +I
Sbjct: 61   LGVNVEFPNLPLHHSIHAEQFLVTNLTLNGERHLNFFAVSAAPCGHCRQFLQEIRDAPEI 120

Query: 644  KILITSSDNGEE-----EGGEFKPISGFLPHRFGPDDLLEKNVPLLLEPHDNGLVLVECN 480
            KILIT  +N  +     +   F  +  FLPHRFGPDDLL K+ PLLLE HDN L + + +
Sbjct: 121  KILITDPNNSADSDSAADSDGFLRLGSFLPHRFGPDDLLGKDHPLLLESHDNHLKISDLD 180

Query: 479  NVYSNGTYCNGNVDIGIGKLKIAAFEAANASHAPYSGCPSGVAIMDSDGKVYKGSYTESA 300
            ++      CNGN D     LK  A  AAN S+APYS CPSGV+++D DGKVY+G Y ESA
Sbjct: 181  SI------CNGNTD-SSADLKQTALAAANRSYAPYSLCPSGVSLVDCDGKVYRGWYMESA 233

Query: 299  AYNPSLGPIQAGLVAYVAS-GGGGYEKIVAGVLVEKEGAMVGQEGTARLLLKTISPQCDF 123
            AYNPS+GP+QA LV YVA+ GGGGYE+IV  VLVEKE A+V QE TARLLL+TISP+C+F
Sbjct: 234  AYNPSMGPVQAALVDYVANGGGGGYERIVGAVLVEKEDAVVRQEHTARLLLETISPKCEF 293

Query: 122  RVFHC 108
            +VFHC
Sbjct: 294  KVFHC 298