BLASTX nr result

ID: Coptis23_contig00016757 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016757
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678...    40   1e-07
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    45   3e-07
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    45   4e-07
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...    45   5e-07
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    44   6e-07

>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
           putative protein [Arabidopsis thaliana]
          Length = 473

 Score = 40.4 bits (93), Expect(2) = 1e-07
 Identities = 18/40 (45%), Positives = 23/40 (57%)
 Frame = -3

Query: 120 LHGSLSTQDRLIKKNILNHSECIFCRNARENSHHLFFDCP 1
           +H  LST DR+   N+   + CI C  A E+  HLFF CP
Sbjct: 326 VHNRLSTGDRMTLWNMGVDATCILCNKALESRDHLFFSCP 365



 Score = 40.0 bits (92), Expect(2) = 1e-07
 Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
 Frame = -2

Query: 310 RIEKEYLSVEIHSHLEEDKIVWNATSSWQ---YSTKSAYMGLKNIREKVKWYKLIRGRIC 140
           R+E+  +      +  ED+ +W    +     +STK  +  ++ +  KV WYK +     
Sbjct: 255 RVEERLILSWNSRNQAEDRALWKGKENRFRSIFSTKDTWNHIRTVSNKVAWYKGVWFAQA 314

Query: 139 VPKHSFIAWQPINSR 95
           +PKH+F  W  +++R
Sbjct: 315 IPKHAFCMWLAVHNR 329


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 45.1 bits (105), Expect(2) = 3e-07
 Identities = 16/57 (28%), Positives = 36/57 (63%)
 Frame = -2

Query: 265 EEDKIVWNATSSWQYSTKSAYMGLKNIREKVKWYKLIRGRICVPKHSFIAWQPINSR 95
           ++D++VW  + + ++S K A+  L+  R+ V+W+ ++  +  VP+HSF+ W  +  +
Sbjct: 310 QKDELVWLDSPNHRFSVKVAWEQLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQK 366



 Score = 33.9 bits (76), Expect(2) = 3e-07
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -3

Query: 108 LSTQDRLIKKNILNHSECIFCRNARENSHHLFFDC 4
           L+TQD+L +  I   + C  C    E+ +HLFF+C
Sbjct: 367 LTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFEC 401


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 44.7 bits (104), Expect(2) = 4e-07
 Identities = 16/57 (28%), Positives = 36/57 (63%)
 Frame = -2

Query: 265  EEDKIVWNATSSWQYSTKSAYMGLKNIREKVKWYKLIRGRICVPKHSFIAWQPINSR 95
            ++D+I+W  + + ++S K A+  L+  R+ V+W+ ++  +  VP+HSF+ W  +  +
Sbjct: 843  QKDEIIWLDSPNHRFSVKVAWEQLRRHRQLVEWHDIVWFKNAVPRHSFLLWMVVQQK 899



 Score = 33.9 bits (76), Expect(2) = 4e-07
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -3

Query: 108  LSTQDRLIKKNILNHSECIFCRNARENSHHLFFDC 4
            L+TQD+L +  I   + C  C    E+ +HLFF+C
Sbjct: 900  LTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFEC 934


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 44.7 bits (104), Expect(2) = 5e-07
 Identities = 17/57 (29%), Positives = 35/57 (61%)
 Frame = -2

Query: 265 EEDKIVWNATSSWQYSTKSAYMGLKNIREKVKWYKLIRGRICVPKHSFIAWQPINSR 95
           ++D+IVW  + + ++S K A+  L+  R  V+W+ ++  +  VP+HSF+ W  +  +
Sbjct: 128 QKDEIVWLDSPNHRFSVKVAWEQLRRHRHMVEWHDIVWFKNAVPRHSFLLWMVVQQK 184



 Score = 33.9 bits (76), Expect(2) = 5e-07
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -3

Query: 108 LSTQDRLIKKNILNHSECIFCRNARENSHHLFFDC 4
           L+TQD+L +  I   + C  C    E+ +HLFF+C
Sbjct: 185 LTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFEC 219


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 43.5 bits (101), Expect(2) = 6e-07
 Identities = 16/57 (28%), Positives = 35/57 (61%)
 Frame = -2

Query: 265  EEDKIVWNATSSWQYSTKSAYMGLKNIREKVKWYKLIRGRICVPKHSFIAWQPINSR 95
            ++D+IVW  + + ++  K A+  L+  R+ V+W+ ++  +  VP+HSF+ W  +  +
Sbjct: 1183 QKDEIVWLDSPNHRFLVKVAWEHLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQK 1239



 Score = 34.7 bits (78), Expect(2) = 6e-07
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -3

Query: 108  LSTQDRLIKKNILNHSECIFCRNARENSHHLFFDC 4
            L+TQD+L +  I   + C  C    E+ +HLFF+C
Sbjct: 1240 LTTQDKLYRFGIHGPNRCSLCLRNNEDHNHLFFEC 1274


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