BLASTX nr result

ID: Coptis23_contig00016756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016756
         (574 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145491.1| PREDICTED: ER membrane protein complex subun...   283   1e-74
ref|XP_002515399.1| conserved hypothetical protein [Ricinus comm...   283   1e-74
ref|XP_004164576.1| PREDICTED: ER membrane protein complex subun...   282   2e-74
ref|XP_002285573.1| PREDICTED: transmembrane protein 85 [Vitis v...   282   3e-74
ref|XP_002309687.1| predicted protein [Populus trichocarpa] gi|2...   278   3e-73

>ref|XP_004145491.1| PREDICTED: ER membrane protein complex subunit 4-like [Cucumis
           sativus]
          Length = 180

 Score =  283 bits (725), Expect = 1e-74
 Identities = 139/179 (77%), Positives = 156/179 (87%), Gaps = 3/179 (1%)
 Frame = -3

Query: 536 MEKGKGVML--RRWAVELTDTSSL-SIKDIPDPPGYTKASQDQDDSTVSRQKKDAEAAWK 366
           MEKGKG+M+  RRWAV+ +D SS  S +DIPDPPG+T+ASQDQDDST+SRQKKDAE+ WK
Sbjct: 1   MEKGKGLMVDSRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60

Query: 365 SQKAWEVAQAPVKNLFMMGFMMWMAGNTVHLFSIGITFSALWQPLSALQGLGKVFEPYKD 186
           +QKAWEVAQAP+KNLFMMGFMMWMAG+TVHLFSIGITFSALWQP+SALQG+GKVFEPYKD
Sbjct: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 185 PKVDTLAPKLVFXXXXXXXXXLGVWKLNSLGLLPTHASDWVSSLPPAREVEFSGGGFPL 9
            KVD L PKL+F         LGVWKLN+LGLLPTH SDWVSSLPPA+EVEFSGGG  L
Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGISL 179


>ref|XP_002515399.1| conserved hypothetical protein [Ricinus communis]
           gi|223545343|gb|EEF46848.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 180

 Score =  283 bits (725), Expect = 1e-74
 Identities = 138/179 (77%), Positives = 155/179 (86%), Gaps = 3/179 (1%)
 Frame = -3

Query: 536 MEKGKGVML--RRWAVELTDTSSL-SIKDIPDPPGYTKASQDQDDSTVSRQKKDAEAAWK 366
           MEKGKGVM   RRWA++ TD S+L S +D+PDPPG+++ASQDQDDSTV++QKKDAEA WK
Sbjct: 1   MEKGKGVMGSGRRWAIDFTDNSNLPSSRDVPDPPGFSRASQDQDDSTVTKQKKDAEANWK 60

Query: 365 SQKAWEVAQAPVKNLFMMGFMMWMAGNTVHLFSIGITFSALWQPLSALQGLGKVFEPYKD 186
           +QKAWEVAQAP KNL MMGFMMWMAGNTVHLFSIGITFSALWQP+SALQG+GKVFEPYKD
Sbjct: 61  AQKAWEVAQAPFKNLMMMGFMMWMAGNTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 185 PKVDTLAPKLVFXXXXXXXXXLGVWKLNSLGLLPTHASDWVSSLPPAREVEFSGGGFPL 9
            +VD   PKL+F         LG+WKLNSLGLLPTHASDWVSSLPPA+EVEFSGGG PL
Sbjct: 121 SRVDLNGPKLLFIALNLGGLALGIWKLNSLGLLPTHASDWVSSLPPAQEVEFSGGGIPL 179


>ref|XP_004164576.1| PREDICTED: ER membrane protein complex subunit 4-like [Cucumis
           sativus]
          Length = 180

 Score =  282 bits (722), Expect = 2e-74
 Identities = 138/179 (77%), Positives = 156/179 (87%), Gaps = 3/179 (1%)
 Frame = -3

Query: 536 MEKGKGVML--RRWAVELTDTSSL-SIKDIPDPPGYTKASQDQDDSTVSRQKKDAEAAWK 366
           MEKGKG+M+  RRWAV+ +D SS  S +DIPDPPG+T+ASQDQDDST+SRQKKDAE+ WK
Sbjct: 1   MEKGKGLMVDSRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60

Query: 365 SQKAWEVAQAPVKNLFMMGFMMWMAGNTVHLFSIGITFSALWQPLSALQGLGKVFEPYKD 186
           +QKAWEVAQAP+KNLFMMGFMMWMAG+TVHLFSIGITFSALWQP+SALQG+GKVFEPY+D
Sbjct: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYRD 120

Query: 185 PKVDTLAPKLVFXXXXXXXXXLGVWKLNSLGLLPTHASDWVSSLPPAREVEFSGGGFPL 9
            KVD L PKL+F         LGVWKLN+LGLLPTH SDWVSSLPPA+EVEFSGGG  L
Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGISL 179


>ref|XP_002285573.1| PREDICTED: transmembrane protein 85 [Vitis vinifera]
           gi|147864285|emb|CAN83012.1| hypothetical protein
           VITISV_010104 [Vitis vinifera]
           gi|296082155|emb|CBI21160.3| unnamed protein product
           [Vitis vinifera]
          Length = 179

 Score =  282 bits (721), Expect = 3e-74
 Identities = 140/178 (78%), Positives = 155/178 (87%), Gaps = 2/178 (1%)
 Frame = -3

Query: 536 MEKGKGVML-RRWAVELTDTSSL-SIKDIPDPPGYTKASQDQDDSTVSRQKKDAEAAWKS 363
           MEKGKGVM  RRWAV+LTD S+  S +DIPDPPG+++AS DQDDST+SRQKKDAEA WK+
Sbjct: 1   MEKGKGVMGGRRWAVDLTDYSTTPSSRDIPDPPGFSRASLDQDDSTLSRQKKDAEANWKA 60

Query: 362 QKAWEVAQAPVKNLFMMGFMMWMAGNTVHLFSIGITFSALWQPLSALQGLGKVFEPYKDP 183
           QKAWEVAQAP KNL MMGFMMWMAG+TVHLFSIGITFSALWQP+SALQG+GKVFEPYKD 
Sbjct: 61  QKAWEVAQAPFKNLLMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDS 120

Query: 182 KVDTLAPKLVFXXXXXXXXXLGVWKLNSLGLLPTHASDWVSSLPPAREVEFSGGGFPL 9
           KVD L PKL+F         LGVWKLN+LGLLPTHASDWVSSLPPA+EVE+SGGG PL
Sbjct: 121 KVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPAQEVEYSGGGIPL 178


>ref|XP_002309687.1| predicted protein [Populus trichocarpa] gi|222855663|gb|EEE93210.1|
           predicted protein [Populus trichocarpa]
          Length = 180

 Score =  278 bits (712), Expect = 3e-73
 Identities = 136/179 (75%), Positives = 153/179 (85%), Gaps = 3/179 (1%)
 Frame = -3

Query: 536 MEKGKGVML--RRWAVELTDTSSL-SIKDIPDPPGYTKASQDQDDSTVSRQKKDAEAAWK 366
           M+KGK VM   RRWAV+ TD S+L S +DIPDPPG+++ASQDQ+DS V++QKKDAEA WK
Sbjct: 1   MDKGKAVMGSGRRWAVDFTDNSTLPSSRDIPDPPGFSRASQDQEDSAVTKQKKDAEANWK 60

Query: 365 SQKAWEVAQAPVKNLFMMGFMMWMAGNTVHLFSIGITFSALWQPLSALQGLGKVFEPYKD 186
           +QKAWEVAQAP KNL MMGFMMWMAGNTVHLFSIGITFSALWQP+ ALQG+GKVFEPYKD
Sbjct: 61  AQKAWEVAQAPFKNLLMMGFMMWMAGNTVHLFSIGITFSALWQPIGALQGVGKVFEPYKD 120

Query: 185 PKVDTLAPKLVFXXXXXXXXXLGVWKLNSLGLLPTHASDWVSSLPPAREVEFSGGGFPL 9
            KVD L PKLVF         LG+WKLN+LGLLPTHASDWVSSLPPA+EVE+SGGG PL
Sbjct: 121 SKVDLLVPKLVFIALNLGGLALGIWKLNTLGLLPTHASDWVSSLPPAKEVEYSGGGVPL 179


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