BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016750
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-a...   181   7e-44
ref|XP_002871139.1| SNF2 domain-containing protein [Arabidopsis ...   173   1e-41
ref|NP_196132.2| DNA/RNA helicase [Arabidopsis thaliana] gi|2026...   172   3e-41
sp|Q9FF61.1|SM3L1_ARATH RecName: Full=Putative SWI/SNF-related m...   172   3e-41
ref|XP_002308876.1| chromatin remodeling complex subunit [Populu...   170   1e-40

>ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 1-like
            [Vitis vinifera]
          Length = 874

 Score =  181 bits (458), Expect = 7e-44
 Identities = 93/125 (74%), Positives = 106/125 (84%)
 Frame = +1

Query: 4    LRLDGSMTAKKRAEVIEQFSNQDSCTTTVLLASLKASGTGINLTAASRVYLLEPWWNPAV 183
            LRLDGSM AK+RA+VIE+F        TVLLASLKASG GINLTAASRVYLLEPWWNPAV
Sbjct: 746  LRLDGSMNAKRRAQVIEEFGAPGPNGPTVLLASLKASGAGINLTAASRVYLLEPWWNPAV 805

Query: 184  EEQAMDRVHRIGQKKDVKIVRLITKDSIEERILALQDKKKMLAREAFRRKDGKDAGRIGM 363
            EEQAMDRVHRIGQK+DVKIVRLI ++SIEERIL LQ++KK LA+EAF R+  KD   +G+
Sbjct: 806  EEQAMDRVHRIGQKEDVKIVRLIARNSIEERILELQERKKKLAKEAFGRRGLKDRREVGV 865

Query: 364  EDLRV 378
            EDLR+
Sbjct: 866  EDLRM 870


>ref|XP_002871139.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
            gi|297316976|gb|EFH47398.1| SNF2 domain-containing
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 861

 Score =  173 bits (438), Expect = 1e-41
 Identities = 84/124 (67%), Positives = 102/124 (82%)
 Frame = +1

Query: 1    ILRLDGSMTAKKRAEVIEQFSNQDSCTTTVLLASLKASGTGINLTAASRVYLLEPWWNPA 180
            ILRLDG+MT KKR +VI +F N +     VLLASLKASG GINLTAASRVYLL+PWWNPA
Sbjct: 732  ILRLDGAMTLKKRTQVIGEFGNPELTGPVVLLASLKASGAGINLTAASRVYLLDPWWNPA 791

Query: 181  VEEQAMDRVHRIGQKKDVKIVRLITKDSIEERILALQDKKKMLAREAFRRKDGKDAGRIG 360
            VEEQAMDR+HRIGQK++VK++R+I +DSIEER+L LQ KKK LA EAF+R+  KD   + 
Sbjct: 792  VEEQAMDRIHRIGQKQEVKMIRMIARDSIEERVLELQQKKKNLANEAFKRRQKKDEREVN 851

Query: 361  MEDL 372
            +ED+
Sbjct: 852  VEDV 855


>ref|NP_196132.2| DNA/RNA helicase [Arabidopsis thaliana] gi|20260624|gb|AAM13210.1|
            helicase-like transcription factor-like protein
            [Arabidopsis thaliana] gi|31711770|gb|AAP68241.1|
            At5g05130 [Arabidopsis thaliana]
            gi|332003449|gb|AED90832.1| DNA/RNA helicase [Arabidopsis
            thaliana]
          Length = 862

 Score =  172 bits (435), Expect = 3e-41
 Identities = 83/124 (66%), Positives = 102/124 (82%)
 Frame = +1

Query: 1    ILRLDGSMTAKKRAEVIEQFSNQDSCTTTVLLASLKASGTGINLTAASRVYLLEPWWNPA 180
            ILRLDG+MT KKR +VI +F N +     VLLASLKASGTGINLTAASRVYL +PWWNPA
Sbjct: 733  ILRLDGAMTVKKRTQVIGEFGNPELTGPVVLLASLKASGTGINLTAASRVYLFDPWWNPA 792

Query: 181  VEEQAMDRVHRIGQKKDVKIVRLITKDSIEERILALQDKKKMLAREAFRRKDGKDAGRIG 360
            VEEQAMDR+HRIGQK++VK++R+I ++SIEER+L LQ KKK LA EAF+R+  KD   + 
Sbjct: 793  VEEQAMDRIHRIGQKQEVKMIRMIARNSIEERVLELQQKKKNLANEAFKRRQKKDEREVN 852

Query: 361  MEDL 372
            +ED+
Sbjct: 853  VEDV 856


>sp|Q9FF61.1|SM3L1_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin subfamily A member
            3-like 1; Short=SMARCA3-like protein 1
            gi|10178052|dbj|BAB11535.1| helicase-like transcription
            factor-like protein [Arabidopsis thaliana]
          Length = 881

 Score =  172 bits (435), Expect = 3e-41
 Identities = 83/124 (66%), Positives = 102/124 (82%)
 Frame = +1

Query: 1    ILRLDGSMTAKKRAEVIEQFSNQDSCTTTVLLASLKASGTGINLTAASRVYLLEPWWNPA 180
            ILRLDG+MT KKR +VI +F N +     VLLASLKASGTGINLTAASRVYL +PWWNPA
Sbjct: 752  ILRLDGAMTVKKRTQVIGEFGNPELTGPVVLLASLKASGTGINLTAASRVYLFDPWWNPA 811

Query: 181  VEEQAMDRVHRIGQKKDVKIVRLITKDSIEERILALQDKKKMLAREAFRRKDGKDAGRIG 360
            VEEQAMDR+HRIGQK++VK++R+I ++SIEER+L LQ KKK LA EAF+R+  KD   + 
Sbjct: 812  VEEQAMDRIHRIGQKQEVKMIRMIARNSIEERVLELQQKKKNLANEAFKRRQKKDEREVN 871

Query: 361  MEDL 372
            +ED+
Sbjct: 872  VEDV 875


>ref|XP_002308876.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222854852|gb|EEE92399.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 799

 Score =  170 bits (430), Expect = 1e-40
 Identities = 87/125 (69%), Positives = 101/125 (80%)
 Frame = +1

Query: 1    ILRLDGSMTAKKRAEVIEQFSNQDSCTTTVLLASLKASGTGINLTAASRVYLLEPWWNPA 180
            ILRLDGSM AKKRA+VI+QF        TVLLASLKASG GINL  ASRVYLLEPWWNPA
Sbjct: 670  ILRLDGSMNAKKRAQVIKQFGVPGPDGPTVLLASLKASGAGINLAVASRVYLLEPWWNPA 729

Query: 181  VEEQAMDRVHRIGQKKDVKIVRLITKDSIEERILALQDKKKMLAREAFRRKDGKDAGRIG 360
            VEEQAMDRVHRIGQ++DV +VRLI + SIEERIL +Q++KK LA+EAF R+  K    +G
Sbjct: 730  VEEQAMDRVHRIGQEEDVTVVRLIAQSSIEERILEMQERKKKLAKEAFGRRGTKTQREVG 789

Query: 361  MEDLR 375
            ++DLR
Sbjct: 790  IDDLR 794