BLASTX nr result

ID: Coptis23_contig00016748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016748
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002440902.1| hypothetical protein SORBIDRAFT_09g016160 [S...    77   1e-12
ref|XP_002457856.1| hypothetical protein SORBIDRAFT_03g016088 [S...    77   2e-12
ref|NP_001175358.1| Os08g0112000 [Oryza sativa Japonica Group] g...    76   3e-12
gb|EEE67922.1| hypothetical protein OsJ_25793 [Oryza sativa Japo...    76   3e-12
gb|AAO34493.1| putative helicase [Oryza sativa Japonica Group]         75   4e-12

>ref|XP_002440902.1| hypothetical protein SORBIDRAFT_09g016160 [Sorghum bicolor]
            gi|241946187|gb|EES19332.1| hypothetical protein
            SORBIDRAFT_09g016160 [Sorghum bicolor]
          Length = 1379

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/90 (41%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
 Frame = +1

Query: 4    ERLGLLESDNAIRESLLEAATIHMPSALRRCFVTILVHCQPVGVRALWNEFCDYMTDDFS 183
            E+ GL+E+DN I + L+EAAT  MP ALRR F T+LVHC+   + ALW +  + M +D+S
Sbjct: 789  EKRGLIETDNTIDDCLVEAATFQMPYALRRLFATVLVHCEATRICALWEKHKESMAEDYS 848

Query: 184  STACSAHKTNRL-LTELNSLLSQYNKSISN 270
               C++    ++ L ++  LL    K I N
Sbjct: 849  RNQCNSELVEQMVLRDIRDLLQSMGKDIKN 878


>ref|XP_002457856.1| hypothetical protein SORBIDRAFT_03g016088 [Sorghum bicolor]
           gi|241929831|gb|EES02976.1| hypothetical protein
           SORBIDRAFT_03g016088 [Sorghum bicolor]
          Length = 142

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
 Frame = +1

Query: 4   ERLGLLESDNAIRESLLEAATIHMPSALRRCFVTILVHCQPVGVRALWNEFCDYMTDDFS 183
           E+ GL+E+DN I + L+E AT  MP ALRR F T+LVHC+   +RALW +  + M +D+S
Sbjct: 50  EKRGLIETDNTIDDCLVEQATFQMPYALRRLFATVLVHCEATRIRALWEKHKESMAEDYS 109

Query: 184 STACSAHKTNRL-LTELNSLLSQYNKSISN 270
              C++    ++ L ++  LL    K I +
Sbjct: 110 RNQCNSELVEQMVLRDIRDLLQSMGKDIKS 139


>ref|NP_001175358.1| Os08g0112000 [Oryza sativa Japonica Group]
            gi|255678104|dbj|BAH94086.1| Os08g0112000 [Oryza sativa
            Japonica Group]
          Length = 1481

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
 Frame = +1

Query: 1    AERLGLLESDNAIRESLLEAATIHMPSALRRCFVTILVHCQPVGVRALWNEFCDYMTDDF 180
            AER GL+E+DN + E L EA    MP +LRR F TILV+C+P  VR LW++  D M+DD+
Sbjct: 1030 AERRGLIEADNTLDECLTEAGVFQMPLSLRRLFATILVYCEPSDVRGLWDKHLDAMSDDY 1089

Query: 181  SSTACSAHKTNRL-LTELNSLLSQYNKSISN 270
                   H   ++ L ++  +L    K I++
Sbjct: 1090 KRNNTCPHVVQQMVLIDIRGMLQSMGKEITS 1120


>gb|EEE67922.1| hypothetical protein OsJ_25793 [Oryza sativa Japonica Group]
          Length = 1132

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
 Frame = +1

Query: 1    AERLGLLESDNAIRESLLEAATIHMPSALRRCFVTILVHCQPVGVRALWNEFCDYMTDDF 180
            AER GL+E+DN + E L EA    MP +LRR F TILV+C+P  VR LW++  D M+DD+
Sbjct: 817  AERRGLIEADNTLDECLTEAGVFQMPLSLRRLFATILVYCEPSDVRGLWDKHLDAMSDDY 876

Query: 181  SSTACSAHKTNRL-LTELNSLLSQYNKSISN 270
                   H   ++ L ++  +L    K I++
Sbjct: 877  KRNNTCPHVVQQMVLIDIRGMLQSMGKEITS 907


>gb|AAO34493.1| putative helicase [Oryza sativa Japonica Group]
          Length = 1629

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 37/90 (41%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
 Frame = +1

Query: 4    ERLGLLESDNAIRESLLEAATIHMPSALRRCFVTILVHCQPVGVRALWNEFCDYMTDDF- 180
            ER GL+E+DN + E L EA    MP++LRR F TILV+C+P  VR LW++  D M+DD+ 
Sbjct: 1039 ERRGLIEADNTLDECLTEARVFQMPASLRRLFATILVYCEPSDVRGLWDKHLDAMSDDYR 1098

Query: 181  SSTACSAHKTNRLLTELNSLLSQYNKSISN 270
             + AC       +L ++  +L    K I++
Sbjct: 1099 RNNACPHVVQQMVLIDIRGMLQSMGKEITS 1128


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