BLASTX nr result
ID: Coptis23_contig00016738
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00016738
(575 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003617095.1| Protein argonaute 4 [Medicago truncatula] gi... 133 4e-34
ref|XP_003617096.1| Protein argonaute 4 [Medicago truncatula] gi... 133 4e-34
ref|XP_003617094.1| Protein argonaute 4 [Medicago truncatula] gi... 133 4e-34
ref|XP_002275928.1| PREDICTED: protein argonaute 4 [Vitis vinife... 126 1e-32
gb|AFV15383.1| AGO4D [Solanum lycopersicum] 133 2e-32
>ref|XP_003617095.1| Protein argonaute 4 [Medicago truncatula]
gi|355518430|gb|AET00054.1| Protein argonaute 4
[Medicago truncatula]
Length = 948
Score = 133 bits (335), Expect(2) = 4e-34
Identities = 71/154 (46%), Positives = 92/154 (59%)
Frame = -3
Query: 552 FIFSKLCELLPLQRYKKPISSVQRSVLVDKTKLRPRERMEVLDKGLNFIADNGSKTNKYN 373
F+ +LC L+ LQRY K +S++QRS LV+K++ +P+ERM VL L KT+ Y
Sbjct: 421 FVPVELCSLVSLQRYTKALSTLQRSSLVEKSRQKPQERMRVLTDAL--------KTSDYG 472
Query: 372 VDPMLHACGISIDSQPAVVQGRVLSEPKLIVGRGEDLNPLSGCWNFMQKTLWRPVLLENW 193
+PML CGISI S V GRVL P+L G GED NP +G WNF K + +PV +E W
Sbjct: 473 SEPMLRNCGISITSGFTQVDGRVLQAPRLKFGNGEDFNPRNGRWNFNNKKIVQPVKIEKW 532
Query: 192 IAVNFSRYSKVRMFCNDLITCGKQKGLNIASTSD 91
VNFS VR DLI CG KG+++ D
Sbjct: 533 AVVNFSARCDVRGLVRDLIKCGGMKGIHVEQPFD 566
Score = 36.6 bits (83), Expect(2) = 4e-34
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = -1
Query: 101 PLQIFEEDRQMERAPPAVRVEKMFK 27
P FEE+ Q RAPP VRVEKMF+
Sbjct: 564 PFDCFEENGQFRRAPPLVRVEKMFE 588
>ref|XP_003617096.1| Protein argonaute 4 [Medicago truncatula]
gi|355518431|gb|AET00055.1| Protein argonaute 4
[Medicago truncatula]
Length = 926
Score = 133 bits (335), Expect(2) = 4e-34
Identities = 71/154 (46%), Positives = 92/154 (59%)
Frame = -3
Query: 552 FIFSKLCELLPLQRYKKPISSVQRSVLVDKTKLRPRERMEVLDKGLNFIADNGSKTNKYN 373
F+ +LC L+ LQRY K +S++QRS LV+K++ +P+ERM VL L KT+ Y
Sbjct: 421 FVPVELCSLVSLQRYTKALSTLQRSSLVEKSRQKPQERMRVLTDAL--------KTSDYG 472
Query: 372 VDPMLHACGISIDSQPAVVQGRVLSEPKLIVGRGEDLNPLSGCWNFMQKTLWRPVLLENW 193
+PML CGISI S V GRVL P+L G GED NP +G WNF K + +PV +E W
Sbjct: 473 SEPMLRNCGISITSGFTQVDGRVLQAPRLKFGNGEDFNPRNGRWNFNNKKIVQPVKIEKW 532
Query: 192 IAVNFSRYSKVRMFCNDLITCGKQKGLNIASTSD 91
VNFS VR DLI CG KG+++ D
Sbjct: 533 AVVNFSARCDVRGLVRDLIKCGGMKGIHVEQPFD 566
Score = 36.6 bits (83), Expect(2) = 4e-34
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = -1
Query: 101 PLQIFEEDRQMERAPPAVRVEKMFK 27
P FEE+ Q RAPP VRVEKMF+
Sbjct: 564 PFDCFEENGQFRRAPPLVRVEKMFE 588
>ref|XP_003617094.1| Protein argonaute 4 [Medicago truncatula]
gi|355518429|gb|AET00053.1| Protein argonaute 4
[Medicago truncatula]
Length = 908
Score = 133 bits (335), Expect(2) = 4e-34
Identities = 71/154 (46%), Positives = 92/154 (59%)
Frame = -3
Query: 552 FIFSKLCELLPLQRYKKPISSVQRSVLVDKTKLRPRERMEVLDKGLNFIADNGSKTNKYN 373
F+ +LC L+ LQRY K +S++QRS LV+K++ +P+ERM VL L KT+ Y
Sbjct: 381 FVPVELCSLVSLQRYTKALSTLQRSSLVEKSRQKPQERMRVLTDAL--------KTSDYG 432
Query: 372 VDPMLHACGISIDSQPAVVQGRVLSEPKLIVGRGEDLNPLSGCWNFMQKTLWRPVLLENW 193
+PML CGISI S V GRVL P+L G GED NP +G WNF K + +PV +E W
Sbjct: 433 SEPMLRNCGISITSGFTQVDGRVLQAPRLKFGNGEDFNPRNGRWNFNNKKIVQPVKIEKW 492
Query: 192 IAVNFSRYSKVRMFCNDLITCGKQKGLNIASTSD 91
VNFS VR DLI CG KG+++ D
Sbjct: 493 AVVNFSARCDVRGLVRDLIKCGGMKGIHVEQPFD 526
Score = 36.6 bits (83), Expect(2) = 4e-34
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = -1
Query: 101 PLQIFEEDRQMERAPPAVRVEKMFK 27
P FEE+ Q RAPP VRVEKMF+
Sbjct: 524 PFDCFEENGQFRRAPPLVRVEKMFE 548
>ref|XP_002275928.1| PREDICTED: protein argonaute 4 [Vitis vinifera]
gi|296083994|emb|CBI24382.3| unnamed protein product
[Vitis vinifera]
Length = 913
Score = 126 bits (317), Expect(2) = 1e-32
Identities = 63/151 (41%), Positives = 92/151 (60%)
Frame = -3
Query: 540 KLCELLPLQRYKKPISSVQRSVLVDKTKLRPRERMEVLDKGLNFIADNGSKTNKYNVDPM 361
+LC L+ LQRY K +S++QR+ LV++++ +P+ER+ VL L ++N Y+ +PM
Sbjct: 391 ELCTLVSLQRYTKALSTLQRASLVERSRQKPQERIGVLTNAL--------RSNNYDAEPM 442
Query: 360 LHACGISIDSQPAVVQGRVLSEPKLIVGRGEDLNPLSGCWNFMQKTLWRPVLLENWIAVN 181
L +CGISI ++GRVL+ P+L VG GED P +G WNF K L P +E W VN
Sbjct: 443 LRSCGISISRDLTQIEGRVLAAPRLKVGNGEDFFPRNGRWNFNNKKLVEPTKIERWAVVN 502
Query: 180 FSRYSKVRMFCNDLITCGKQKGLNIASTSDI 88
FS +R +LI CG KG++I D+
Sbjct: 503 FSARCDIRNLVRELIKCGGMKGIHIDPPFDV 533
Score = 38.5 bits (88), Expect(2) = 1e-32
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = -1
Query: 101 PLQIFEEDRQMERAPPAVRVEKMFKD 24
P +FEE+ Q RAPP VRVEKMF++
Sbjct: 530 PFDVFEENPQSRRAPPIVRVEKMFEE 555
>gb|AFV15383.1| AGO4D [Solanum lycopersicum]
Length = 881
Score = 133 bits (335), Expect(2) = 2e-32
Identities = 73/150 (48%), Positives = 92/150 (61%)
Frame = -3
Query: 552 FIFSKLCELLPLQRYKKPISSVQRSVLVDKTKLRPRERMEVLDKGLNFIADNGSKTNKYN 373
FI +LC L+ LQRY K +S++QR+ LV+K++ +P+ERM L L KT+ Y
Sbjct: 354 FIPLELCTLVSLQRYTKALSNLQRASLVEKSRQKPQERMRALTDAL--------KTSNYK 405
Query: 372 VDPMLHACGISIDSQPAVVQGRVLSEPKLIVGRGEDLNPLSGCWNFMQKTLWRPVLLENW 193
DP+L + GISI Q V GR+L PKL VG +DL P +G WNF QK L PV LE W
Sbjct: 406 ADPLLGSAGISISDQFTQVDGRILPTPKLRVGDDQDLFPRNGRWNFNQKRLVEPVKLERW 465
Query: 192 IAVNFSRYSKVRMFCNDLITCGKQKGLNIA 103
AVNFS VR C DL CGK KG+ I+
Sbjct: 466 AAVNFSARCDVRKLCMDLQRCGKMKGIFIS 495
Score = 31.2 bits (69), Expect(2) = 2e-32
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = -1
Query: 119 KGLTLHP--LQIFEEDRQMERAPPAVRVEKMFKD 24
KG+ + P IFEE++Q R P VRVEKM ++
Sbjct: 490 KGIFISPPFQHIFEENQQYRRNPAPVRVEKMLEE 523