BLASTX nr result

ID: Coptis23_contig00016735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016735
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526977.1| vacuolar protein sorting, putative [Ricinus ...   184   7e-45
ref|XP_004134530.1| PREDICTED: vacuolar protein sorting-associat...   178   5e-43
ref|XP_002272177.2| PREDICTED: vacuolar protein sorting-associat...   178   5e-43
emb|CBI39019.3| unnamed protein product [Vitis vinifera]              178   5e-43
ref|XP_002317064.1| predicted protein [Populus trichocarpa] gi|2...   177   7e-43

>ref|XP_002526977.1| vacuolar protein sorting, putative [Ricinus communis]
            gi|223533668|gb|EEF35404.1| vacuolar protein sorting,
            putative [Ricinus communis]
          Length = 1046

 Score =  184 bits (467), Expect = 7e-45
 Identities = 88/106 (83%), Positives = 104/106 (98%)
 Frame = +2

Query: 2    CGLILLKMLSDYVDMNHFLPALSSELVHRVVEILKFFNTRTCQLVLGAGAMQVSGLKSIA 181
            CGLILLKMLS+Y+DMN+F+PALSSE++HRVVEILKFFNTRTCQLVLGAGAMQVSGLKSI 
Sbjct: 793  CGLILLKMLSEYIDMNNFVPALSSEVIHRVVEILKFFNTRTCQLVLGAGAMQVSGLKSIT 852

Query: 182  AKHLALASQVISFVYAVIPDIKRILFIRIPESRKALLLLEIDRVAQ 319
            +KHLALASQV+SF YA+IP+I+R+LF+++PE+RKALLLLEIDRVAQ
Sbjct: 853  SKHLALASQVVSFTYAIIPEIRRVLFLKVPETRKALLLLEIDRVAQ 898


>ref|XP_004134530.1| PREDICTED: vacuolar protein sorting-associated protein 54-like
            [Cucumis sativus] gi|449490672|ref|XP_004158673.1|
            PREDICTED: vacuolar protein sorting-associated protein
            54-like [Cucumis sativus]
          Length = 1014

 Score =  178 bits (451), Expect = 5e-43
 Identities = 88/106 (83%), Positives = 101/106 (95%)
 Frame = +2

Query: 2    CGLILLKMLSDYVDMNHFLPALSSELVHRVVEILKFFNTRTCQLVLGAGAMQVSGLKSIA 181
            CGLILLKMLS+Y+DMN+ LPALSSE+VHRVVEILKFFNTRTCQLVLGAGAMQVSGLKSI 
Sbjct: 761  CGLILLKMLSEYIDMNNSLPALSSEVVHRVVEILKFFNTRTCQLVLGAGAMQVSGLKSIT 820

Query: 182  AKHLALASQVISFVYAVIPDIKRILFIRIPESRKALLLLEIDRVAQ 319
            +KHLALASQVISF +A+IP+I+RILF+++PE+RK LLL EIDRVAQ
Sbjct: 821  SKHLALASQVISFTFAIIPEIRRILFLKVPEARKTLLLSEIDRVAQ 866


>ref|XP_002272177.2| PREDICTED: vacuolar protein sorting-associated protein 54-like [Vitis
            vinifera]
          Length = 1041

 Score =  178 bits (451), Expect = 5e-43
 Identities = 87/106 (82%), Positives = 101/106 (95%)
 Frame = +2

Query: 2    CGLILLKMLSDYVDMNHFLPALSSELVHRVVEILKFFNTRTCQLVLGAGAMQVSGLKSIA 181
            CGLILLKMLS+Y+DMN+F PALSSE+VHRVVEILKFFNTRTCQLVLGAGAMQVSGLKSI 
Sbjct: 788  CGLILLKMLSEYIDMNNFFPALSSEVVHRVVEILKFFNTRTCQLVLGAGAMQVSGLKSIT 847

Query: 182  AKHLALASQVISFVYAVIPDIKRILFIRIPESRKALLLLEIDRVAQ 319
            +KHLALASQVISF +A+IP+I+RILF+++PE+R+ LLL EIDRVAQ
Sbjct: 848  SKHLALASQVISFTFAIIPEIRRILFLKVPETRRPLLLSEIDRVAQ 893


>emb|CBI39019.3| unnamed protein product [Vitis vinifera]
          Length = 903

 Score =  178 bits (451), Expect = 5e-43
 Identities = 87/106 (82%), Positives = 101/106 (95%)
 Frame = +2

Query: 2   CGLILLKMLSDYVDMNHFLPALSSELVHRVVEILKFFNTRTCQLVLGAGAMQVSGLKSIA 181
           CGLILLKMLS+Y+DMN+F PALSSE+VHRVVEILKFFNTRTCQLVLGAGAMQVSGLKSI 
Sbjct: 650 CGLILLKMLSEYIDMNNFFPALSSEVVHRVVEILKFFNTRTCQLVLGAGAMQVSGLKSIT 709

Query: 182 AKHLALASQVISFVYAVIPDIKRILFIRIPESRKALLLLEIDRVAQ 319
           +KHLALASQVISF +A+IP+I+RILF+++PE+R+ LLL EIDRVAQ
Sbjct: 710 SKHLALASQVISFTFAIIPEIRRILFLKVPETRRPLLLSEIDRVAQ 755


>ref|XP_002317064.1| predicted protein [Populus trichocarpa] gi|222860129|gb|EEE97676.1|
           predicted protein [Populus trichocarpa]
          Length = 830

 Score =  177 bits (450), Expect = 7e-43
 Identities = 86/106 (81%), Positives = 101/106 (95%)
 Frame = +2

Query: 2   CGLILLKMLSDYVDMNHFLPALSSELVHRVVEILKFFNTRTCQLVLGAGAMQVSGLKSIA 181
           CGLILLKMLS+Y+DMN+FLP LSSE+VHRVVEILKFFNTRTCQL+LGAGAMQVSGLKSI 
Sbjct: 577 CGLILLKMLSEYMDMNNFLPTLSSEVVHRVVEILKFFNTRTCQLILGAGAMQVSGLKSIT 636

Query: 182 AKHLALASQVISFVYAVIPDIKRILFIRIPESRKALLLLEIDRVAQ 319
           +KHLALASQVI FV+A+IP+I+R+LF+++PE+RK LLL EIDRVAQ
Sbjct: 637 SKHLALASQVIGFVHAIIPEIRRVLFLKVPEARKVLLLSEIDRVAQ 682


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