BLASTX nr result

ID: Coptis23_contig00016729 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016729
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39026.3| unnamed protein product [Vitis vinifera]               88   8e-16
emb|CAN66040.1| hypothetical protein VITISV_035756 [Vitis vinifera]    88   8e-16
ref|XP_002267672.2| PREDICTED: probable LRR receptor-like serine...    87   1e-15
emb|CBI20016.3| unnamed protein product [Vitis vinifera]               87   1e-15
ref|XP_002267620.2| PREDICTED: probable LRR receptor-like serine...    84   1e-14

>emb|CBI39026.3| unnamed protein product [Vitis vinifera]
          Length = 1037

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 48/92 (52%), Positives = 55/92 (59%)
 Frame = -3

Query: 276 SKKNRTGMXXXXXXXXXXXXXICALTILYLRRKXXXXXXXXXXXXXXXRPNTFSYAELRT 97
           SKKN TG+             I   ++LY++RK               RPNTFSY+ELRT
Sbjct: 635 SKKNNTGLIVGVAVSVGVVSMILICSVLYIKRKASYVNEDEEFLGIGPRPNTFSYSELRT 694

Query: 96  ATGDFNLTNKLGEGGFGPVYKGMLSDGREVAV 1
           AT DFN  NKLGEGGFGPVYKG L+DGR VAV
Sbjct: 695 ATEDFNPANKLGEGGFGPVYKGTLNDGRVVAV 726


>emb|CAN66040.1| hypothetical protein VITISV_035756 [Vitis vinifera]
          Length = 612

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 48/92 (52%), Positives = 55/92 (59%)
 Frame = -3

Query: 276 SKKNRTGMXXXXXXXXXXXXXICALTILYLRRKXXXXXXXXXXXXXXXRPNTFSYAELRT 97
           SKKN TG+             I   ++LY++RK               RPNTFSY+ELRT
Sbjct: 210 SKKNNTGLIVGVAVSVGVVSMILICSVLYIKRKASYVNEDEEFLGIGPRPNTFSYSELRT 269

Query: 96  ATGDFNLTNKLGEGGFGPVYKGMLSDGREVAV 1
           AT DFN  NKLGEGGFGPVYKG L+DGR VAV
Sbjct: 270 ATEDFNPANKLGEGGFGPVYKGTLNDGRVVAV 301


>ref|XP_002267672.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g56130-like [Vitis vinifera]
          Length = 1028

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 53/108 (49%), Positives = 60/108 (55%), Gaps = 8/108 (7%)
 Frame = -3

Query: 300 TPDFQPMGS------KKNRTGMXXXXXXXXXXXXXICALTILY--LRRKXXXXXXXXXXX 145
           TPDF+P  S      KKNRTG+             +    + Y  LRRK           
Sbjct: 614 TPDFEPTVSNTAPNGKKNRTGLIVGIAVGLGVVCFLSVFALYYFVLRRKKPSENQDEELL 673

Query: 144 XXXXRPNTFSYAELRTATGDFNLTNKLGEGGFGPVYKGMLSDGREVAV 1
               RP TFSYAEL+ ATGDF+ +NKLGEGGFGPVYKG LSDGR VAV
Sbjct: 674 GMDARPYTFSYAELKNATGDFSPSNKLGEGGFGPVYKGTLSDGRVVAV 721


>emb|CBI20016.3| unnamed protein product [Vitis vinifera]
          Length = 2193

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 53/108 (49%), Positives = 60/108 (55%), Gaps = 8/108 (7%)
 Frame = -3

Query: 300  TPDFQPMGS------KKNRTGMXXXXXXXXXXXXXICALTILY--LRRKXXXXXXXXXXX 145
            TPDF+P  S      KKNRTG+             +    + Y  LRRK           
Sbjct: 690  TPDFEPTVSNTAPNGKKNRTGLIVGIAVGLGVVCFLSVFALYYFVLRRKKPSENQDEELL 749

Query: 144  XXXXRPNTFSYAELRTATGDFNLTNKLGEGGFGPVYKGMLSDGREVAV 1
                RP TFSYAEL+ ATGDF+ +NKLGEGGFGPVYKG LSDGR VAV
Sbjct: 750  GMDARPYTFSYAELKNATGDFSPSNKLGEGGFGPVYKGTLSDGRVVAV 797



 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 50/108 (46%), Positives = 60/108 (55%), Gaps = 8/108 (7%)
 Frame = -3

Query: 300  TPDFQPM------GSKKNRTGMXXXXXXXXXXXXXICALTILY--LRRKXXXXXXXXXXX 145
            TP+F+P         KK+RTG+             +   ++ Y  LRRK           
Sbjct: 1765 TPNFEPTVPNTAPNGKKHRTGLIVGIAVALGLVCFLAVFSVYYFVLRRKKPYENQDEELL 1824

Query: 144  XXXXRPNTFSYAELRTATGDFNLTNKLGEGGFGPVYKGMLSDGREVAV 1
                RP TFSYAEL+ ATGDF+ +NKLGEGGFGPVYKG LSDGR VAV
Sbjct: 1825 GMEARPYTFSYAELKNATGDFSPSNKLGEGGFGPVYKGTLSDGRVVAV 1872


>ref|XP_002267620.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g56130-like [Vitis vinifera]
          Length = 1031

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 50/108 (46%), Positives = 60/108 (55%), Gaps = 8/108 (7%)
 Frame = -3

Query: 300 TPDFQPM------GSKKNRTGMXXXXXXXXXXXXXICALTILY--LRRKXXXXXXXXXXX 145
           TP+F+P         KK+RTG+             +   ++ Y  LRRK           
Sbjct: 616 TPNFEPTVPNTAPNGKKHRTGLIVGIAVALGLVCFLAVFSVYYFVLRRKKPYENQDEELL 675

Query: 144 XXXXRPNTFSYAELRTATGDFNLTNKLGEGGFGPVYKGMLSDGREVAV 1
               RP TFSYAEL+ ATGDF+ +NKLGEGGFGPVYKG LSDGR VAV
Sbjct: 676 GMEARPYTFSYAELKNATGDFSPSNKLGEGGFGPVYKGTLSDGRVVAV 723


Top