BLASTX nr result

ID: Coptis23_contig00016717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016717
         (1097 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285117.2| PREDICTED: histidine kinase 4-like [Vitis vi...   262   4e-98
gb|ACE63259.1| cytokinin receptor 1 [Betula pendula]                  244   4e-91
ref|XP_002314765.1| histidine kinase cytokinin receptor [Populus...   236   2e-90
ref|XP_002527541.1| histidine kinase 1, 2, 3 plant, putative [Ri...   245   3e-90
ref|XP_002312478.1| histidine kinase cytokinin receptor [Populus...   234   5e-88

>ref|XP_002285117.2| PREDICTED: histidine kinase 4-like [Vitis vinifera]
          Length = 1003

 Score =  262 bits (669), Expect(2) = 4e-98
 Identities = 139/224 (62%), Positives = 171/224 (76%), Gaps = 3/224 (1%)
 Frame = -1

Query: 1016 FKLLVANEKLQFDH---LGTNDETSNTVTLVVSVEDTGIGIPSHAQDRVFTPFMQADSST 846
            FK L+ +E L+ D    +    E S  VTL+VSVEDTGIGIP  AQ RVFTPFMQADSST
Sbjct: 572  FKHLIFDEDLRSDASNIMTVTSEASEKVTLMVSVEDTGIGIPLRAQGRVFTPFMQADSST 631

Query: 845  SRNFGGTGIGLSISQCLVELMGGHINFISRPNIGSTFAFTASLQRCERSALNDLKRPLSE 666
            SRN+GGTGIGLSIS+CLVELMGG I FISRP IGSTF+FTA   RC+++AL+DLK+  S+
Sbjct: 632  SRNYGGTGIGLSISKCLVELMGGQIKFISRPQIGSTFSFTADFGRCKKNALSDLKKSNSD 691

Query: 665  PLPTGFKGMKATVVDGKPVRGIVTRYHLERLGIQVDLVNTIKVAFSAVSGLNGCSRSGIG 486
             LP GF+G+KA VVDG+PVR IVT+YHL+RLGI V++ N+IK A  A++G NG   SG G
Sbjct: 692  DLPIGFRGLKAIVVDGRPVRAIVTKYHLKRLGILVEVANSIKKAV-AITGKNGSLTSGSG 750

Query: 485  KQPNVILIEKDSWILNEGFVVPERLMDLKQSGRMVEHPKMILLA 354
             QP++IL+EKDSWI  E   +  RL+D KQ+   ++ PKMILLA
Sbjct: 751  NQPDMILVEKDSWISEEDADLNLRLLDWKQNRHTLKLPKMILLA 794



 Score =  124 bits (310), Expect(2) = 4e-98
 Identities = 64/90 (71%), Positives = 78/90 (86%), Gaps = 1/90 (1%)
 Frame = -3

Query: 267  SITNVENIKAKAAGFSD-IIVKPLRASMVAACLQQVLGIGSRSRQGREFPNGSAYLSSIL 91
            +I++ E  KAKAAGF+D +I+KPLRASMVAACLQQVLG+G + +QG++  NGSA+L S+L
Sbjct: 796  NISSAEFDKAKAAGFADTVIMKPLRASMVAACLQQVLGLGKKRQQGKDMLNGSAFLQSLL 855

Query: 90   CGKHILVVDDNRVNRIVAAGALKKFGAIVE 1
            CGK ILVVDDN+VNR VAAGALKKFGA VE
Sbjct: 856  CGKKILVVDDNKVNRRVAAGALKKFGADVE 885


>gb|ACE63259.1| cytokinin receptor 1 [Betula pendula]
          Length = 1004

 Score =  244 bits (622), Expect(2) = 4e-91
 Identities = 131/224 (58%), Positives = 173/224 (77%), Gaps = 3/224 (1%)
 Frame = -1

Query: 1016 FKLLVANEKLQFD---HLGTNDETSNTVTLVVSVEDTGIGIPSHAQDRVFTPFMQADSST 846
            FK LVA+E+L+ +   ++   +E S  VTL+V VEDTGIGIP  AQDRVF PFMQADSST
Sbjct: 574  FKHLVADEELRSEASRNMMNTNEASEHVTLMVCVEDTGIGIPLCAQDRVFMPFMQADSST 633

Query: 845  SRNFGGTGIGLSISQCLVELMGGHINFISRPNIGSTFAFTASLQRCERSALNDLKRPLSE 666
            SR++GGTGIGLSIS+CLVELMGG INFISRP +GSTF+FTA   RC+++A +D+K+P+SE
Sbjct: 634  SRHYGGTGIGLSISKCLVELMGGQINFISRPQVGSTFSFTAVFGRCKKNAFSDVKKPISE 693

Query: 665  PLPTGFKGMKATVVDGKPVRGIVTRYHLERLGIQVDLVNTIKVAFSAVSGLNGCSRSGIG 486
             LP+GF+G+KA VVD KPVR  VTRYHL+RLGI V++ ++ K+A  A++G  G S +   
Sbjct: 694  DLPSGFRGLKALVVDEKPVRAAVTRYHLKRLGILVEVASSFKIAV-AMTGKKG-SLTLRK 751

Query: 485  KQPNVILIEKDSWILNEGFVVPERLMDLKQSGRMVEHPKMILLA 354
             QP+++L+EKDSW+  E   +   L+D KQ+G + + PKMILLA
Sbjct: 752  FQPDLVLVEKDSWMSAEEGGLNGWLLDWKQNGHIFQLPKMILLA 795



 Score =  118 bits (296), Expect(2) = 4e-91
 Identities = 63/90 (70%), Positives = 74/90 (82%), Gaps = 1/90 (1%)
 Frame = -3

Query: 267  SITNVENIKAKAAGFSD-IIVKPLRASMVAACLQQVLGIGSRSRQGREFPNGSAYLSSIL 91
            +I   E  KAKAAGF+D +I+KPLRASMVAACLQQVLGIG + +Q ++  NGS++L S+L
Sbjct: 797  NIDKAEFDKAKAAGFADTVIMKPLRASMVAACLQQVLGIGKKRQQEKDMLNGSSFLQSLL 856

Query: 90   CGKHILVVDDNRVNRIVAAGALKKFGAIVE 1
            CGK ILVVDDNRVNR VA GALKKFGA VE
Sbjct: 857  CGKKILVVDDNRVNRRVAEGALKKFGADVE 886


>ref|XP_002314765.1| histidine kinase cytokinin receptor [Populus trichocarpa]
            gi|190148365|gb|ACE63265.1| cytokinin receptor 1B
            [Populus trichocarpa] gi|222863805|gb|EEF00936.1|
            histidine kinase cytokinin receptor [Populus trichocarpa]
          Length = 1006

 Score =  236 bits (601), Expect(2) = 2e-90
 Identities = 123/220 (55%), Positives = 163/220 (74%), Gaps = 3/220 (1%)
 Frame = -1

Query: 1004 VANEKLQFD---HLGTNDETSNTVTLVVSVEDTGIGIPSHAQDRVFTPFMQADSSTSRNF 834
            +++E  +FD   ++ T++E S  +TL+V VEDTGIGIP  AQ RVF PF+QADSSTSR++
Sbjct: 578  LSDEDFRFDASINVMTSNEASENITLMVCVEDTGIGIPLKAQSRVFMPFVQADSSTSRHY 637

Query: 833  GGTGIGLSISQCLVELMGGHINFISRPNIGSTFAFTASLQRCERSALNDLKRPLSEPLPT 654
            GGTGIGLSIS+CLVELMGG I+FISRP +GSTF+FTA    C+++A   +++  +E LP+
Sbjct: 638  GGTGIGLSISKCLVELMGGQISFISRPEVGSTFSFTAVFSTCKKNAFTKMEKRNAEDLPS 697

Query: 653  GFKGMKATVVDGKPVRGIVTRYHLERLGIQVDLVNTIKVAFSAVSGLNGCSRSGIGKQPN 474
            GF+G+KA VVDGKPVR  VTRYHL+RLGI  ++V+ +KVA +   G NG   SG   QP+
Sbjct: 698  GFRGLKALVVDGKPVRAAVTRYHLKRLGILAEVVSNLKVA-AGSCGKNGSLTSGSKIQPD 756

Query: 473  VILIEKDSWILNEGFVVPERLMDLKQSGRMVEHPKMILLA 354
            +IL+EKD+WI  E  V     +D KQ+G   + PKMILLA
Sbjct: 757  MILVEKDTWISGEDGVSNVWKLDWKQNGHAFKFPKMILLA 796



 Score =  124 bits (311), Expect(2) = 2e-90
 Identities = 66/90 (73%), Positives = 76/90 (84%), Gaps = 1/90 (1%)
 Frame = -3

Query: 267  SITNVENIKAKAAGFSD-IIVKPLRASMVAACLQQVLGIGSRSRQGREFPNGSAYLSSIL 91
            +ITN E  KAKAAGF+D +I+KPLRASMVAACL QVLG+G +  QG+  PNGS++L S+L
Sbjct: 798  NITNSEFDKAKAAGFADTVIMKPLRASMVAACLLQVLGMGKKRSQGKCMPNGSSFLQSLL 857

Query: 90   CGKHILVVDDNRVNRIVAAGALKKFGAIVE 1
            CGK ILVVDDNRVNR VAAGALKKFGA VE
Sbjct: 858  CGKKILVVDDNRVNRRVAAGALKKFGADVE 887


>ref|XP_002527541.1| histidine kinase 1, 2, 3 plant, putative [Ricinus communis]
            gi|223533091|gb|EEF34850.1| histidine kinase 1, 2, 3
            plant, putative [Ricinus communis]
          Length = 1011

 Score =  245 bits (625), Expect(2) = 3e-90
 Identities = 133/225 (59%), Positives = 167/225 (74%), Gaps = 4/225 (1%)
 Frame = -1

Query: 1016 FKLLVANEKLQ----FDHLGTNDETSNTVTLVVSVEDTGIGIPSHAQDRVFTPFMQADSS 849
            FK LVA+E  Q     + L TND   N VTLVVSVEDTGIGIP HAQDRVF PFMQADSS
Sbjct: 581  FKHLVADEDFQSNGSLNVLTTNDACEN-VTLVVSVEDTGIGIPLHAQDRVFMPFMQADSS 639

Query: 848  TSRNFGGTGIGLSISQCLVELMGGHINFISRPNIGSTFAFTASLQRCERSALNDLKRPLS 669
            TSRN+GGTGIGLSIS+CLVELMGGHI+F+SRP +GSTF+FTA+  RC+++  N +++  S
Sbjct: 640  TSRNYGGTGIGLSISKCLVELMGGHISFVSRPQVGSTFSFTAAFGRCKKNKFNKMEKRNS 699

Query: 668  EPLPTGFKGMKATVVDGKPVRGIVTRYHLERLGIQVDLVNTIKVAFSAVSGLNGCSRSGI 489
            E LP+ F+G+KA VVDGKPVR  VT YHL+RLGI  ++ +++KVA +     NG  +S  
Sbjct: 700  EDLPSSFRGLKAIVVDGKPVRAAVTTYHLKRLGILAEVASSLKVA-AFTCAKNGSLKS-- 756

Query: 488  GKQPNVILIEKDSWILNEGFVVPERLMDLKQSGRMVEHPKMILLA 354
              QP++IL+EKDSWI  E       L++ KQ+G + + PKMILLA
Sbjct: 757  SAQPDIILVEKDSWISGEDGGSSVWLLERKQNGHVFKLPKMILLA 801



 Score =  114 bits (286), Expect(2) = 3e-90
 Identities = 61/90 (67%), Positives = 74/90 (82%), Gaps = 1/90 (1%)
 Frame = -3

Query: 267  SITNVENIKAKAAGFSD-IIVKPLRASMVAACLQQVLGIGSRSRQGREFPNGSAYLSSIL 91
            +I++ E  KAKAAGF+D +I+KPLRASMV ACLQQV+G+G    QG++ PNGS++L S+L
Sbjct: 803  NISSDEFNKAKAAGFADTVIMKPLRASMVGACLQQVMGMGKTRPQGKDVPNGSSFLQSLL 862

Query: 90   CGKHILVVDDNRVNRIVAAGALKKFGAIVE 1
             GK ILVVDDN VNR VAAGALKKFGA VE
Sbjct: 863  YGKKILVVDDNMVNRRVAAGALKKFGANVE 892


>ref|XP_002312478.1| histidine kinase cytokinin receptor [Populus trichocarpa]
            gi|222852298|gb|EEE89845.1| histidine kinase cytokinin
            receptor [Populus trichocarpa]
          Length = 1007

 Score =  234 bits (596), Expect(2) = 5e-88
 Identities = 125/220 (56%), Positives = 162/220 (73%), Gaps = 4/220 (1%)
 Frame = -1

Query: 1001 ANEKLQFD---HLGTNDETSNTVTLVVSVEDTGIGIPSHAQDRVFTPFMQADSSTSRNFG 831
            ++E  +FD   ++ TN+E S  V L+V VEDTGIGIP  AQ RVF PF+QADSSTSR +G
Sbjct: 579  SDEDFRFDASINVMTNNEASEDVGLMVCVEDTGIGIPLKAQGRVFMPFVQADSSTSRQYG 638

Query: 830  GTGIGLSISQCLVELMGGHINFISRPNIGSTFAFTASLQRCERSALNDLKRPLSEPLPTG 651
            GTGIGLSIS+CLVELMGG INFISRP +GSTF+FTA    C+++  N++++  +E LP+G
Sbjct: 639  GTGIGLSISKCLVELMGGQINFISRPEVGSTFSFTAVFGTCKKNTFNNMEKRNAEELPSG 698

Query: 650  FKGMKATVVDGKPVRGIVTRYHLERLGIQVDLVNTIKVAFSAVSGLNGCSRSGIGK-QPN 474
            F+G+KA VVDG PVR  VTRYHL+RLGI  ++V+++K+A +   G NG   SG GK  P+
Sbjct: 699  FRGLKALVVDGNPVRATVTRYHLKRLGILAEVVSSLKLA-AIGCGKNGSLTSGRGKIHPD 757

Query: 473  VILIEKDSWILNEGFVVPERLMDLKQSGRMVEHPKMILLA 354
            +IL+EKDSWI  E  V     +D KQ+G   + PKMILLA
Sbjct: 758  IILVEKDSWISGEDGVSSVWQLDSKQNGHAFKLPKMILLA 797



 Score =  118 bits (295), Expect(2) = 5e-88
 Identities = 62/90 (68%), Positives = 73/90 (81%), Gaps = 1/90 (1%)
 Frame = -3

Query: 267  SITNVENIKAKAAGFSD-IIVKPLRASMVAACLQQVLGIGSRSRQGREFPNGSAYLSSIL 91
            +ITN E   AK AGF+D +I+KPLR+SMVAACL QVLG+G +  QG+  PNGS++L S+L
Sbjct: 799  NITNSEFDIAKGAGFADTVILKPLRSSMVAACLLQVLGMGKKRSQGKGMPNGSSFLQSLL 858

Query: 90   CGKHILVVDDNRVNRIVAAGALKKFGAIVE 1
            CGK ILVVDDNRVNR VAAGALKKFGA  E
Sbjct: 859  CGKRILVVDDNRVNRRVAAGALKKFGADAE 888


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