BLASTX nr result
ID: Coptis23_contig00016711
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00016711
(2288 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002512938.1| bifunctional dihydrofolate reductase-thymidy... 845 0.0
ref|XP_002280254.1| PREDICTED: bifunctional dihydrofolate reduct... 844 0.0
ref|NP_001238644.1| bifunctional dihydrofolate reductase-thymidy... 840 0.0
ref|XP_002306118.1| dihydrofolate reductase-thymidylate synthase... 837 0.0
ref|XP_003537861.1| PREDICTED: bifunctional dihydrofolate reduct... 836 0.0
>ref|XP_002512938.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative
[Ricinus communis] gi|223547949|gb|EEF49441.1|
bifunctional dihydrofolate reductase-thymidylate
synthase, putative [Ricinus communis]
Length = 528
Score = 845 bits (2183), Expect = 0.0
Identities = 403/527 (76%), Positives = 469/527 (88%)
Frame = -1
Query: 1877 SVMSGGSNVVKGDSHMGPRTWRTYQVIVAATPSMGIGKDGKLPWRLPSDLNFFKEVTMTT 1698
++ +G +N+ + D PR RTYQV+VAAT MGIGKDGKLPWRLPSDL FFK+VT+TT
Sbjct: 8 NLSNGNANIEQHD----PR--RTYQVVVAATRDMGIGKDGKLPWRLPSDLKFFKDVTLTT 61
Query: 1697 SELGKTNAVIMGRKTWESIPQKYRPLPGRLNVVLTRFGSSNIASAENVVVCGGLASALDI 1518
++ GK NAVIMGRKTWESIP ++RPLPGRLNVVLTR GS +IA+AENVV+CG ASAL++
Sbjct: 62 TDSGKKNAVIMGRKTWESIPLEHRPLPGRLNVVLTRSGSFDIATAENVVMCGSFASALEL 121
Query: 1517 LAGPPYCLSIEKVFVIGGGQIFSEALNAPECEAIHITEIETNIECDTFMPSIDSKHFRLW 1338
LA PYCLSIEKV+VIGGGQI EALNAP C+A+HITEIET+ +CDTF+P+IDS F W
Sbjct: 122 LAASPYCLSIEKVYVIGGGQILREALNAPGCDAVHITEIETSFDCDTFIPAIDSSIFHPW 181
Query: 1337 YSSFPLVQDNIRHSFATYIRVRSSAAESISLENGLTFDNSSESSKFEIENFSFLPKIIFE 1158
Y SFP+V++NIR+SFATY+RVRSSA ES ++GL+ ++SSE+SKF+++ FSFLPK++F+
Sbjct: 182 YLSFPMVENNIRYSFATYVRVRSSAVESNGHDSGLSSESSSENSKFDVKKFSFLPKMVFD 241
Query: 1157 RHEEYTYLKLVQDIILNGTQKADRTETGTLSKFGCQMRFNLRKYFPLLTTKRVFWRGVVE 978
RHEE+ YL+LVQ+II +G K DRT TGTLSKFGCQ+RFNLRK FPLLTTK+VFWRGVVE
Sbjct: 242 RHEEFLYLRLVQEIISDGILKDDRTGTGTLSKFGCQVRFNLRKTFPLLTTKKVFWRGVVE 301
Query: 977 ELLWFISGSTNSKVLQEKGIHIWDGNSSREYLDSIGLVDKEEGDLGPVYGFQWRHFGASY 798
ELLWFISGSTN+KVLQEKGIHIWDGN+SR+YLDSIGL ++EEGDLGPVYGFQWRHFGA Y
Sbjct: 302 ELLWFISGSTNAKVLQEKGIHIWDGNASRDYLDSIGLKNREEGDLGPVYGFQWRHFGARY 361
Query: 797 TNMHDNYNGQGFDQLLDVVNKIRNTPDDRRIVLSAWNPSDLKLMALPPCHMFAQFYVANG 618
T+MH +Y GQGFDQLLDVVNKI+N PDDRRI+LSAWNPSDLKLMALPPCHMFAQFYVANG
Sbjct: 362 TDMHADYTGQGFDQLLDVVNKIKNNPDDRRIILSAWNPSDLKLMALPPCHMFAQFYVANG 421
Query: 617 ELSCQMYQRSADMGLGVPFNIASYSLLTCMIAHVCDLVPGDFVHVVGDAHVYKNHTRPLS 438
ELSCQMYQRSADMGLGVPFNIASY LLTC+IAHVCDLVPGDFVHV+GD HVY+ H RPL
Sbjct: 422 ELSCQMYQRSADMGLGVPFNIASYGLLTCIIAHVCDLVPGDFVHVIGDTHVYRTHVRPLQ 481
Query: 437 EQLQKHPKPFPMLKINPLKKDIDSFVISDFELMGYNPHQKIEMKMAV 297
EQLQK PKPFP+LKINP KK+IDSFV +DF+L+GY+PH KIEMKMAV
Sbjct: 482 EQLQKLPKPFPILKINPEKKNIDSFVAADFKLIGYDPHHKIEMKMAV 528
>ref|XP_002280254.1| PREDICTED: bifunctional dihydrofolate reductase-thymidylate
synthase-like [Vitis vinifera]
Length = 524
Score = 844 bits (2180), Expect = 0.0
Identities = 402/516 (77%), Positives = 460/516 (89%)
Frame = -1
Query: 1844 GDSHMGPRTWRTYQVIVAATPSMGIGKDGKLPWRLPSDLNFFKEVTMTTSELGKTNAVIM 1665
G++++ P RTYQV+VAAT MGIGKDGKLPWRLPSD+ FK++TMT ++ K NAVIM
Sbjct: 12 GNANIQPDPQRTYQVVVAATRDMGIGKDGKLPWRLPSDMKIFKDITMTVADTVKKNAVIM 71
Query: 1664 GRKTWESIPQKYRPLPGRLNVVLTRFGSSNIASAENVVVCGGLASALDILAGPPYCLSIE 1485
GRKTWESIP ++RPLPGRLNVVLTR GS +IA+AENVV+CG +ASAL++LA PYCLSIE
Sbjct: 72 GRKTWESIPLEHRPLPGRLNVVLTRSGSFDIATAENVVICGSMASALELLAASPYCLSIE 131
Query: 1484 KVFVIGGGQIFSEALNAPECEAIHITEIETNIECDTFMPSIDSKHFRLWYSSFPLVQDNI 1305
KVFVIGGGQI EALNAP C+AIHITEIET+ ECDTF+P+IDS F+ WYSSFPLV++NI
Sbjct: 132 KVFVIGGGQILREALNAPGCDAIHITEIETSFECDTFIPAIDSLVFQPWYSSFPLVENNI 191
Query: 1304 RHSFATYIRVRSSAAESISLENGLTFDNSSESSKFEIENFSFLPKIIFERHEEYTYLKLV 1125
R+SF TY+RVRSSA ES NG D+ ES KFE++ FSFLPK+IFERHEEY YL+LV
Sbjct: 192 RYSFMTYVRVRSSADESQIQNNG---DSGLESIKFEVKKFSFLPKMIFERHEEYIYLRLV 248
Query: 1124 QDIILNGTQKADRTETGTLSKFGCQMRFNLRKYFPLLTTKRVFWRGVVEELLWFISGSTN 945
+DII NG Q+ DRT TGTLSKFGCQMRFNLRK FPLLTTK+VFWRGVVEELLWFISGSTN
Sbjct: 249 EDIISNGVQRDDRTGTGTLSKFGCQMRFNLRKTFPLLTTKKVFWRGVVEELLWFISGSTN 308
Query: 944 SKVLQEKGIHIWDGNSSREYLDSIGLVDKEEGDLGPVYGFQWRHFGASYTNMHDNYNGQG 765
+KVLQEKGIHIWDGN+SR+YLDSIGL D+EEGDLGP+YGFQWRHFGASY +MH +Y GQG
Sbjct: 309 AKVLQEKGIHIWDGNASRDYLDSIGLADREEGDLGPIYGFQWRHFGASYIDMHADYTGQG 368
Query: 764 FDQLLDVVNKIRNTPDDRRIVLSAWNPSDLKLMALPPCHMFAQFYVANGELSCQMYQRSA 585
FDQLLDV+NKI+N P+DRRI+LSAWNPSDLKLMALPPCHMFAQFYV++GELSCQMYQRSA
Sbjct: 369 FDQLLDVINKIKNNPNDRRIILSAWNPSDLKLMALPPCHMFAQFYVSHGELSCQMYQRSA 428
Query: 584 DMGLGVPFNIASYSLLTCMIAHVCDLVPGDFVHVVGDAHVYKNHTRPLSEQLQKHPKPFP 405
DMGLGVPFNIASY+LLTCMIAHVCDLVPGDF+HV+GD+HVY H RPL EQLQK PKPFP
Sbjct: 429 DMGLGVPFNIASYALLTCMIAHVCDLVPGDFIHVIGDSHVYLTHIRPLQEQLQKLPKPFP 488
Query: 404 MLKINPLKKDIDSFVISDFELMGYNPHQKIEMKMAV 297
+LKINP KK+IDSFV +DF+L+GY+PHQKIEMKMAV
Sbjct: 489 ILKINPQKKNIDSFVAADFQLIGYDPHQKIEMKMAV 524
>ref|NP_001238644.1| bifunctional dihydrofolate reductase-thymidylate synthase [Glycine
max] gi|1706522|sp|P51820.1|DRTS_SOYBN RecName:
Full=Bifunctional dihydrofolate reductase-thymidylate
synthase; Short=DHFR-TS; Includes: RecName:
Full=Dihydrofolate reductase; Includes: RecName:
Full=Thymidylate synthase gi|999190|gb|AAB34317.1|
dihydrofolate reductase-thymidylate synthase [Glycine
max] gi|1096144|prf||2111237A dihydrofolate
reductase-thymidylate synthase
Length = 530
Score = 840 bits (2170), Expect = 0.0
Identities = 399/527 (75%), Positives = 456/527 (86%)
Frame = -1
Query: 1877 SVMSGGSNVVKGDSHMGPRTWRTYQVIVAATPSMGIGKDGKLPWRLPSDLNFFKEVTMTT 1698
SV+S G + G + P RTYQV+VAAT GIGKDGKLPWRLP+DL FFKE+TM T
Sbjct: 6 SVISNGHS--NGSVNPLPNLQRTYQVVVAATQDWGIGKDGKLPWRLPTDLKFFKEITMKT 63
Query: 1697 SELGKTNAVIMGRKTWESIPQKYRPLPGRLNVVLTRFGSSNIASAENVVVCGGLASALDI 1518
SE GK NA++MGRKTWESIP +YRPL GRLNVVLTR GS +IA+AENVV+CG ++SAL++
Sbjct: 64 SEPGKKNAIVMGRKTWESIPLEYRPLSGRLNVVLTRSGSFDIATAENVVICGSMSSALEL 123
Query: 1517 LAGPPYCLSIEKVFVIGGGQIFSEALNAPECEAIHITEIETNIECDTFMPSIDSKHFRLW 1338
LA PY LSIEKVFVIGGGQIF EALN P CEAIH+TEI+++IECDTFMP +D FR W
Sbjct: 124 LAASPYSLSIEKVFVIGGGQIFREALNVPGCEAIHLTEIQSSIECDTFMPPVDFTIFRPW 183
Query: 1337 YSSFPLVQDNIRHSFATYIRVRSSAAESISLENGLTFDNSSESSKFEIENFSFLPKIIFE 1158
YSSFP V++NIR+SF TY+RVRSSAAES DN+SES KFE+++FSFLPK+I E
Sbjct: 184 YSSFPKVENNIRYSFTTYVRVRSSAAESAGQNIDPLLDNNSESMKFEVKDFSFLPKMISE 243
Query: 1157 RHEEYTYLKLVQDIILNGTQKADRTETGTLSKFGCQMRFNLRKYFPLLTTKRVFWRGVVE 978
RHEEY YLKLVQDII GT K DRT TGTLSKFGCQMRFNLR FPLLTTK+VFWRGVVE
Sbjct: 244 RHEEYLYLKLVQDIIAEGTTKGDRTGTGTLSKFGCQMRFNLRGNFPLLTTKKVFWRGVVE 303
Query: 977 ELLWFISGSTNSKVLQEKGIHIWDGNSSREYLDSIGLVDKEEGDLGPVYGFQWRHFGASY 798
ELLWFISGSTN+KVLQEKGIHIWDGN+SREYLD +GL ++EEGDLGPVYGFQWRHFGA Y
Sbjct: 304 ELLWFISGSTNAKVLQEKGIHIWDGNASREYLDGVGLTEREEGDLGPVYGFQWRHFGARY 363
Query: 797 TNMHDNYNGQGFDQLLDVVNKIRNTPDDRRIVLSAWNPSDLKLMALPPCHMFAQFYVANG 618
T+MH +Y+GQGFDQLLDV+NKI+ PDDRRI+LSAWNP DLKLMALPPCHMFAQFYVA+G
Sbjct: 364 TDMHHDYSGQGFDQLLDVINKIKRNPDDRRIILSAWNPVDLKLMALPPCHMFAQFYVAHG 423
Query: 617 ELSCQMYQRSADMGLGVPFNIASYSLLTCMIAHVCDLVPGDFVHVVGDAHVYKNHTRPLS 438
ELSCQMYQRSADMGLG+PFNIASY+LLTCMIAHVCDL+PGDF+HV+GDAH+Y+NH RPL
Sbjct: 424 ELSCQMYQRSADMGLGIPFNIASYALLTCMIAHVCDLIPGDFIHVIGDAHIYRNHVRPLQ 483
Query: 437 EQLQKHPKPFPMLKINPLKKDIDSFVISDFELMGYNPHQKIEMKMAV 297
EQL PKPFP LKINP KKDIDSFV +DF+L+GY+PHQKI+MK++V
Sbjct: 484 EQLHNQPKPFPTLKINPKKKDIDSFVAADFKLIGYDPHQKIDMKLSV 530
>ref|XP_002306118.1| dihydrofolate reductase-thymidylate synthase [Populus trichocarpa]
gi|222849082|gb|EEE86629.1| dihydrofolate
reductase-thymidylate synthase [Populus trichocarpa]
Length = 528
Score = 837 bits (2162), Expect = 0.0
Identities = 398/527 (75%), Positives = 463/527 (87%)
Frame = -1
Query: 1877 SVMSGGSNVVKGDSHMGPRTWRTYQVIVAATPSMGIGKDGKLPWRLPSDLNFFKEVTMTT 1698
++ +G +N + D PR +TYQV+VAAT MGIGKDGKLPW+LPSDL FFK++T+TT
Sbjct: 8 NLSNGNANTQQSD----PR--KTYQVVVAATKDMGIGKDGKLPWKLPSDLKFFKDLTLTT 61
Query: 1697 SELGKTNAVIMGRKTWESIPQKYRPLPGRLNVVLTRFGSSNIASAENVVVCGGLASALDI 1518
+ GK NAVIMGRKTWESIP ++RPLPGRLNVVLTR GS +IA+AENVV+CG + SAL++
Sbjct: 62 MDSGKKNAVIMGRKTWESIPLEHRPLPGRLNVVLTRSGSFDIATAENVVICGSMGSALEL 121
Query: 1517 LAGPPYCLSIEKVFVIGGGQIFSEALNAPECEAIHITEIETNIECDTFMPSIDSKHFRLW 1338
LA PYCLSIEKVFVIGGGQI E+LNAP C+AIHITEIET+ +CDTF+P+ID+ F+ W
Sbjct: 122 LAASPYCLSIEKVFVIGGGQILRESLNAPGCDAIHITEIETDFDCDTFIPAIDTSVFQPW 181
Query: 1337 YSSFPLVQDNIRHSFATYIRVRSSAAESISLENGLTFDNSSESSKFEIENFSFLPKIIFE 1158
YSSFP V+++IRH F TY+RVRSS ES S NG D +SE+SKFE++ FSFLPK++FE
Sbjct: 182 YSSFPKVENDIRHCFTTYVRVRSSTIESHSQNNGENSDGNSENSKFEVKKFSFLPKMVFE 241
Query: 1157 RHEEYTYLKLVQDIILNGTQKADRTETGTLSKFGCQMRFNLRKYFPLLTTKRVFWRGVVE 978
RHEEY YL++VQDII +G K DRT TGTLSKFGCQMRFNLRK FPLLTTK+VFWRGVVE
Sbjct: 242 RHEEYLYLRMVQDIISDGNLKDDRTGTGTLSKFGCQMRFNLRKNFPLLTTKKVFWRGVVE 301
Query: 977 ELLWFISGSTNSKVLQEKGIHIWDGNSSREYLDSIGLVDKEEGDLGPVYGFQWRHFGASY 798
ELLWFISGST++KVLQEKGIHIWDGN+SREYLDSIGL D+EEGDLGPVYGFQWRHFGA Y
Sbjct: 302 ELLWFISGSTSAKVLQEKGIHIWDGNASREYLDSIGLKDREEGDLGPVYGFQWRHFGARY 361
Query: 797 TNMHDNYNGQGFDQLLDVVNKIRNTPDDRRIVLSAWNPSDLKLMALPPCHMFAQFYVANG 618
T+MH +Y GQGFDQLLDV++KI+N P+DRRI++SAWNPSDLKLMALPPCHMFAQFYVANG
Sbjct: 362 TDMHADYTGQGFDQLLDVIDKIKNNPNDRRIIISAWNPSDLKLMALPPCHMFAQFYVANG 421
Query: 617 ELSCQMYQRSADMGLGVPFNIASYSLLTCMIAHVCDLVPGDFVHVVGDAHVYKNHTRPLS 438
ELSCQMYQRSADMGLGVPFNIASY+LLTC+IAHVCDL+PGDFVHV+GDAHVY H RPL
Sbjct: 422 ELSCQMYQRSADMGLGVPFNIASYALLTCIIAHVCDLIPGDFVHVIGDAHVYHTHIRPLQ 481
Query: 437 EQLQKHPKPFPMLKINPLKKDIDSFVISDFELMGYNPHQKIEMKMAV 297
EQL+K PKPFP+LKIN KKDID+FV +DF+L+GY+PHQKIEMKMAV
Sbjct: 482 EQLRKLPKPFPILKINSEKKDIDTFVAADFKLIGYDPHQKIEMKMAV 528
>ref|XP_003537861.1| PREDICTED: bifunctional dihydrofolate reductase-thymidylate
synthase-like [Glycine max]
Length = 528
Score = 836 bits (2159), Expect = 0.0
Identities = 395/526 (75%), Positives = 457/526 (86%)
Frame = -1
Query: 1874 VMSGGSNVVKGDSHMGPRTWRTYQVIVAATPSMGIGKDGKLPWRLPSDLNFFKEVTMTTS 1695
V+S G+ G+S P RTYQ +V AT MGI KD KLPW LP+DLNFF+E+T TTS
Sbjct: 7 VISNGN----GNSKSEPHPQRTYQAVVVATRDMGISKDEKLPWTLPTDLNFFEEITTTTS 62
Query: 1694 ELGKTNAVIMGRKTWESIPQKYRPLPGRLNVVLTRFGSSNIASAENVVVCGGLASALDIL 1515
+ GK NAV+MGRKTWESIP + RPLPGRLNVVLTR GS +IA+AENV++CG ++SA+++L
Sbjct: 63 DPGKKNAVVMGRKTWESIPPENRPLPGRLNVVLTRSGSFDIATAENVLICGSVSSAMELL 122
Query: 1514 AGPPYCLSIEKVFVIGGGQIFSEALNAPECEAIHITEIETNIECDTFMPSIDSKHFRLWY 1335
A PYCLSIEKVF+ GGG+IF EALNAP CEA HITEIE +IECDTFMP +++ F+ WY
Sbjct: 123 ASSPYCLSIEKVFLTGGGEIFREALNAPGCEAAHITEIEASIECDTFMPRVNTSVFQTWY 182
Query: 1334 SSFPLVQDNIRHSFATYIRVRSSAAESISLENGLTFDNSSESSKFEIENFSFLPKIIFER 1155
SSFPLV+DN+R+SF TY+RVRS ES FDN+S++ KFE++ FSFLPK+++ER
Sbjct: 183 SSFPLVEDNLRYSFTTYVRVRSFPPESPDQNADPFFDNNSDALKFEVKKFSFLPKMVYER 242
Query: 1154 HEEYTYLKLVQDIILNGTQKADRTETGTLSKFGCQMRFNLRKYFPLLTTKRVFWRGVVEE 975
HEE+ YL+LVQ+II GT K DRT TGTLSKFGCQMRFNLR+ FPLLTTK+VFWRGV+EE
Sbjct: 243 HEEFKYLRLVQEIISEGTTKDDRTGTGTLSKFGCQMRFNLRRNFPLLTTKKVFWRGVIEE 302
Query: 974 LLWFISGSTNSKVLQEKGIHIWDGNSSREYLDSIGLVDKEEGDLGPVYGFQWRHFGASYT 795
LLWFISGST++KVLQEKGIHIWDGN+SREYLDSIGL D+EEGDLGPVYGFQWRHFGA YT
Sbjct: 303 LLWFISGSTSAKVLQEKGIHIWDGNASREYLDSIGLTDREEGDLGPVYGFQWRHFGAKYT 362
Query: 794 NMHDNYNGQGFDQLLDVVNKIRNTPDDRRIVLSAWNPSDLKLMALPPCHMFAQFYVANGE 615
+MH +Y+GQGFDQLLDV+NKI++ PDDRRI+LSAWNPSDLKLMALPPCHMFAQFYVANGE
Sbjct: 363 DMHADYSGQGFDQLLDVINKIKHNPDDRRIILSAWNPSDLKLMALPPCHMFAQFYVANGE 422
Query: 614 LSCQMYQRSADMGLGVPFNIASYSLLTCMIAHVCDLVPGDFVHVVGDAHVYKNHTRPLSE 435
LSCQMYQRSADMGLGVPFNIASY+LLTCMIAHVCDLVPGDF+HV+GDAHVY+NH RPL E
Sbjct: 423 LSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLVPGDFIHVIGDAHVYRNHVRPLQE 482
Query: 434 QLQKHPKPFPMLKINPLKKDIDSFVISDFELMGYNPHQKIEMKMAV 297
QLQ PKPFP+LKINP KKDIDSFV SDF+L+GY PHQKIEMKMAV
Sbjct: 483 QLQNQPKPFPILKINPKKKDIDSFVASDFKLIGYVPHQKIEMKMAV 528