BLASTX nr result

ID: Coptis23_contig00016702 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016702
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279158.1| PREDICTED: zinc finger protein 7-like [Vitis...    92   6e-17
emb|CAN77233.1| hypothetical protein VITISV_001090 [Vitis vinifera]    92   6e-17
emb|CBI22507.3| unnamed protein product [Vitis vinifera]               83   2e-14
ref|XP_002270534.1| PREDICTED: zinc finger protein 7-like [Vitis...    83   2e-14
ref|XP_002298757.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13

>ref|XP_002279158.1| PREDICTED: zinc finger protein 7-like [Vitis vinifera]
          Length = 193

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/82 (53%), Positives = 54/82 (65%)
 Frame = +2

Query: 107 LMIFQKEEEPNKMSVNSFHTGSKSGDSDDMRVSENNSEEWLDLSLGRNDPLIAGDSDSTS 286
           + I Q+EEE N++S N+    SK+   D+    ++N  EWL LSL RN+    GD D  S
Sbjct: 1   MTISQREEEANEVSSNNQDAESKTRSDDEKTSGDDNLGEWLSLSLSRNEAFTTGDGDPQS 60

Query: 287 KPTSNKIFSCNFCMRKFFSSQA 352
           KP  NKIFSCNFCMRKFFSSQA
Sbjct: 61  KPAGNKIFSCNFCMRKFFSSQA 82


>emb|CAN77233.1| hypothetical protein VITISV_001090 [Vitis vinifera]
          Length = 248

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/82 (53%), Positives = 54/82 (65%)
 Frame = +2

Query: 107 LMIFQKEEEPNKMSVNSFHTGSKSGDSDDMRVSENNSEEWLDLSLGRNDPLIAGDSDSTS 286
           + I Q+EEE N++S N+    SK+   D+    ++N  EWL LSL RN+    GD D  S
Sbjct: 1   MTISQREEEANEVSSNNQDAESKTRSDDEKTSGDDNLGEWLSLSLSRNEAFTTGDGDPQS 60

Query: 287 KPTSNKIFSCNFCMRKFFSSQA 352
           KP  NKIFSCNFCMRKFFSSQA
Sbjct: 61  KPAGNKIFSCNFCMRKFFSSQA 82


>emb|CBI22507.3| unnamed protein product [Vitis vinifera]
          Length = 179

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 44/81 (54%), Positives = 54/81 (66%)
 Frame = +2

Query: 110 MIFQKEEEPNKMSVNSFHTGSKSGDSDDMRVSENNSEEWLDLSLGRNDPLIAGDSDSTSK 289
           MIF  E    + SVN    G +  ++ D    E+N  EWL+LSLGRN P  A DSD  S+
Sbjct: 47  MIFHGEGA--ETSVNKQQGGLRISENGDEGAEEDNPGEWLNLSLGRNLPSTALDSDPQSR 104

Query: 290 PTSNKIFSCNFCMRKFFSSQA 352
           PTS+K+FSCNFCMRKF+SSQA
Sbjct: 105 PTSSKVFSCNFCMRKFYSSQA 125


>ref|XP_002270534.1| PREDICTED: zinc finger protein 7-like [Vitis vinifera]
          Length = 189

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 44/81 (54%), Positives = 54/81 (66%)
 Frame = +2

Query: 110 MIFQKEEEPNKMSVNSFHTGSKSGDSDDMRVSENNSEEWLDLSLGRNDPLIAGDSDSTSK 289
           MIF  E    + SVN    G +  ++ D    E+N  EWL+LSLGRN P  A DSD  S+
Sbjct: 1   MIFHGEGA--ETSVNKQQGGLRISENGDEGAEEDNPGEWLNLSLGRNLPSTALDSDPQSR 58

Query: 290 PTSNKIFSCNFCMRKFFSSQA 352
           PTS+K+FSCNFCMRKF+SSQA
Sbjct: 59  PTSSKVFSCNFCMRKFYSSQA 79


>ref|XP_002298757.1| predicted protein [Populus trichocarpa] gi|222846015|gb|EEE83562.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 44/83 (53%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
 Frame = +2

Query: 110 MIFQKE--EEPNKMSVNSFHTGSKSGDSDDMRVSENNSEEWLDLSLGRNDPLIAGDSDST 283
           MIFQ+E  E       N     + S +  D    +NN  EWL+LSLG N P  AGD DS 
Sbjct: 57  MIFQEEAIEIKTLKHQNEMLNSNNSNEGYD----DNNPGEWLNLSLGGNSPSTAGDYDSQ 112

Query: 284 SKPTSNKIFSCNFCMRKFFSSQA 352
           S+PTS+K+FSCNFC RKFFSSQA
Sbjct: 113 SRPTSSKVFSCNFCRRKFFSSQA 135


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