BLASTX nr result

ID: Coptis23_contig00016696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016696
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32873.3| unnamed protein product [Vitis vinifera]              149   3e-34
ref|XP_002278827.1| PREDICTED: zinc finger and SCAN domain-conta...   149   3e-34
ref|XP_002533583.1| zinc finger protein, putative [Ricinus commu...   144   1e-32
ref|XP_002325541.1| predicted protein [Populus trichocarpa] gi|2...   143   2e-32
ref|NP_001234471.1| transcription factor IIIA [Solanum lycopersi...   142   2e-32

>emb|CBI32873.3| unnamed protein product [Vitis vinifera]
          Length = 390

 Score =  149 bits (375), Expect = 3e-34
 Identities = 63/92 (68%), Positives = 78/92 (84%)
 Frame = -1

Query: 278 LDSVEAICSEPGCMKSFSNVDCLKAHLQSCHQHIECEVCGTQQLRKNIKRHMRTHEDGCT 99
           LDSVEA+C EP C+K F+N  CLKAHLQSCHQHI CE+CGT+QL+KNIKRH+RTHE  C+
Sbjct: 205 LDSVEAVCLEPECLKHFTNEQCLKAHLQSCHQHIICEICGTKQLKKNIKRHLRTHESVCS 264

Query: 98  LEQFKCHIDDCCHSFTSKSNLNQHIKAVHLEL 3
            E+ KCH   C H+F++KSNL+QH+KAVHL+L
Sbjct: 265 SERVKCHFKGCLHTFSTKSNLDQHVKAVHLKL 296


>ref|XP_002278827.1| PREDICTED: zinc finger and SCAN domain-containing protein 10-like
           [Vitis vinifera]
          Length = 370

 Score =  149 bits (375), Expect = 3e-34
 Identities = 63/92 (68%), Positives = 78/92 (84%)
 Frame = -1

Query: 278 LDSVEAICSEPGCMKSFSNVDCLKAHLQSCHQHIECEVCGTQQLRKNIKRHMRTHEDGCT 99
           LDSVEA+C EP C+K F+N  CLKAHLQSCHQHI CE+CGT+QL+KNIKRH+RTHE  C+
Sbjct: 185 LDSVEAVCLEPECLKHFTNEQCLKAHLQSCHQHIICEICGTKQLKKNIKRHLRTHESVCS 244

Query: 98  LEQFKCHIDDCCHSFTSKSNLNQHIKAVHLEL 3
            E+ KCH   C H+F++KSNL+QH+KAVHL+L
Sbjct: 245 SERVKCHFKGCLHTFSTKSNLDQHVKAVHLKL 276


>ref|XP_002533583.1| zinc finger protein, putative [Ricinus communis]
           gi|223526542|gb|EEF28801.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 367

 Score =  144 bits (362), Expect = 1e-32
 Identities = 60/93 (64%), Positives = 79/93 (84%), Gaps = 1/93 (1%)
 Frame = -1

Query: 278 LDSVEAICSEPGCMKSFSNVDCLKAHLQSCHQHIECEVCGTQQLRKNIKRHMRTHED-GC 102
           LD+VEAIC E GCMK FSN  CL+AH+QSCH++  CE+CGT+QL+KN+KRH+RTHE  G 
Sbjct: 187 LDAVEAICLESGCMKHFSNSQCLRAHIQSCHRYTTCEICGTKQLKKNLKRHLRTHESGGS 246

Query: 101 TLEQFKCHIDDCCHSFTSKSNLNQHIKAVHLEL 3
           ++E+ KC   DCCH+F++K+NLNQH+KAVHLE+
Sbjct: 247 SVERIKCQFKDCCHTFSNKTNLNQHVKAVHLEV 279


>ref|XP_002325541.1| predicted protein [Populus trichocarpa] gi|222862416|gb|EEE99922.1|
           predicted protein [Populus trichocarpa]
          Length = 239

 Score =  143 bits (360), Expect = 2e-32
 Identities = 64/93 (68%), Positives = 79/93 (84%), Gaps = 2/93 (2%)
 Frame = -1

Query: 278 LDSVEAICSEPGCMKSFSNVDCLKAHLQSCHQHIECEVCGTQQLRKNIKRHMRTHE--DG 105
           LDS+EA+C EPGCMK FSN  CLKAH+QSCHQ+I C++CGT+QLRKNIKRH+RTHE  +G
Sbjct: 96  LDSMEAMCIEPGCMKHFSNKKCLKAHIQSCHQYINCDICGTKQLRKNIKRHLRTHEPVNG 155

Query: 104 CTLEQFKCHIDDCCHSFTSKSNLNQHIKAVHLE 6
            T E+ KCH   C H+F++K+NLNQH+KAVHLE
Sbjct: 156 ST-ERIKCHFKGCQHAFSTKTNLNQHVKAVHLE 187


>ref|NP_001234471.1| transcription factor IIIA [Solanum lycopersicum]
           gi|115279797|gb|ABI85391.1| transcription factor IIIA
           [Solanum lycopersicum] gi|115279800|gb|ABI85393.1|
           transcription factor IIIA [Solanum lycopersicum]
          Length = 372

 Score =  142 bits (359), Expect = 2e-32
 Identities = 59/90 (65%), Positives = 76/90 (84%)
 Frame = -1

Query: 278 LDSVEAICSEPGCMKSFSNVDCLKAHLQSCHQHIECEVCGTQQLRKNIKRHMRTHEDGCT 99
           L++VEA+C EPGCMK F+N  CLK H++SCHQHI+CE+CGT+QL+KNIKRH+RTHE+G  
Sbjct: 186 LETVEAMCLEPGCMKHFTNEKCLKEHIESCHQHIDCEICGTKQLKKNIKRHLRTHEEGPI 245

Query: 98  LEQFKCHIDDCCHSFTSKSNLNQHIKAVHL 9
            E+ KC   DC H+F+S+SNL QHIKAVH+
Sbjct: 246 SERIKCEFQDCLHTFSSRSNLAQHIKAVHV 275


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