BLASTX nr result
ID: Coptis23_contig00016695
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00016695
(459 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002533583.1| zinc finger protein, putative [Ricinus commu... 246 1e-63
emb|CBI32873.3| unnamed protein product [Vitis vinifera] 244 5e-63
ref|XP_002278827.1| PREDICTED: zinc finger and SCAN domain-conta... 244 5e-63
ref|XP_002327353.1| predicted protein [Populus trichocarpa] gi|2... 229 1e-58
ref|NP_001234471.1| transcription factor IIIA [Solanum lycopersi... 221 6e-56
>ref|XP_002533583.1| zinc finger protein, putative [Ricinus communis]
gi|223526542|gb|EEF28801.1| zinc finger protein,
putative [Ricinus communis]
Length = 367
Score = 246 bits (628), Expect = 1e-63
Identities = 107/154 (69%), Positives = 130/154 (84%), Gaps = 1/154 (0%)
Frame = -1
Query: 459 LDSVEAICSEPGCMKSFSNVDCLKAHLQSCHRHIQCGVCGTQQLRKNIKRHMRTHEAG-C 283
LD+VEAIC E GCMK FSN CL+AH+QSCHR+ C +CGT+QL+KN+KRH+RTHE+G
Sbjct: 187 LDAVEAICLESGCMKHFSNSQCLRAHIQSCHRYTTCEICGTKQLKKNLKRHLRTHESGGS 246
Query: 282 TLEQFKCHIDDCCHTFTSKSNLNQHIKAVHLELRPYTCRFTGCGKKFPFKHVRDNHEKTG 103
++E+ KC DCCHTF++K+NLNQH+KAVHLE++P+ C GC K+F FKHVRDNHEK+G
Sbjct: 247 SVERIKCQFKDCCHTFSNKTNLNQHVKAVHLEVKPFACGIPGCDKRFSFKHVRDNHEKSG 306
Query: 102 EHVYIQGDFEEADEQFRSRPRGGRKRKCPTVETL 1
HVY GDFEE+DEQFRSRPRGGRKRKCPTVE L
Sbjct: 307 CHVYTPGDFEESDEQFRSRPRGGRKRKCPTVEML 340
>emb|CBI32873.3| unnamed protein product [Vitis vinifera]
Length = 390
Score = 244 bits (623), Expect = 5e-63
Identities = 106/153 (69%), Positives = 126/153 (82%)
Frame = -1
Query: 459 LDSVEAICSEPGCMKSFSNVDCLKAHLQSCHRHIQCGVCGTQQLRKNIKRHMRTHEAGCT 280
LDSVEA+C EP C+K F+N CLKAHLQSCH+HI C +CGT+QL+KNIKRH+RTHE+ C+
Sbjct: 205 LDSVEAVCLEPECLKHFTNEQCLKAHLQSCHQHIICEICGTKQLKKNIKRHLRTHESVCS 264
Query: 279 LEQFKCHIDDCCHTFTSKSNLNQHIKAVHLELRPYTCRFTGCGKKFPFKHVRDNHEKTGE 100
E+ KCH C HTF++KSNL+QH+KAVHL+LRP+ C GCG +FPFKHVRDNHEKTG
Sbjct: 265 SERVKCHFKGCLHTFSTKSNLDQHVKAVHLKLRPFVCGIPGCGMRFPFKHVRDNHEKTGC 324
Query: 99 HVYIQGDFEEADEQFRSRPRGGRKRKCPTVETL 1
HVY GDFEE DEQFR RP+GGRKRK P +E L
Sbjct: 325 HVYTHGDFEELDEQFRLRPKGGRKRKSPPIEAL 357
>ref|XP_002278827.1| PREDICTED: zinc finger and SCAN domain-containing protein 10-like
[Vitis vinifera]
Length = 370
Score = 244 bits (623), Expect = 5e-63
Identities = 106/153 (69%), Positives = 126/153 (82%)
Frame = -1
Query: 459 LDSVEAICSEPGCMKSFSNVDCLKAHLQSCHRHIQCGVCGTQQLRKNIKRHMRTHEAGCT 280
LDSVEA+C EP C+K F+N CLKAHLQSCH+HI C +CGT+QL+KNIKRH+RTHE+ C+
Sbjct: 185 LDSVEAVCLEPECLKHFTNEQCLKAHLQSCHQHIICEICGTKQLKKNIKRHLRTHESVCS 244
Query: 279 LEQFKCHIDDCCHTFTSKSNLNQHIKAVHLELRPYTCRFTGCGKKFPFKHVRDNHEKTGE 100
E+ KCH C HTF++KSNL+QH+KAVHL+LRP+ C GCG +FPFKHVRDNHEKTG
Sbjct: 245 SERVKCHFKGCLHTFSTKSNLDQHVKAVHLKLRPFVCGIPGCGMRFPFKHVRDNHEKTGC 304
Query: 99 HVYIQGDFEEADEQFRSRPRGGRKRKCPTVETL 1
HVY GDFEE DEQFR RP+GGRKRK P +E L
Sbjct: 305 HVYTHGDFEELDEQFRLRPKGGRKRKSPPIEAL 337
Score = 55.1 bits (131), Expect = 6e-06
Identities = 40/122 (32%), Positives = 53/122 (43%), Gaps = 13/122 (10%)
Frame = -1
Query: 438 CSEPGCMKSFSNVDCLKAHLQS--CHRHIQCGV--CGTQQLRKN-IKRHMRTHEAGCTLE 274
C E C SF LK H+QS R C V C + RK+ + RH+ H+ +
Sbjct: 64 CEE--CGASFKKPAYLKQHMQSHSLERPFTCPVDDCQSSYRRKDHLTRHLLQHQG----K 117
Query: 273 QFKCHIDDCCHTFTSKSNLNQHIKAVHLELRP--------YTCRFTGCGKKFPFKHVRDN 118
F C +++C F + N+ +HIK H E P Y C GCGK F F
Sbjct: 118 LFTCPVENCKRRFAFQGNMKRHIKEFHDEESPPNDVGSKQYVCPELGCGKVFKFASKLQK 177
Query: 117 HE 112
HE
Sbjct: 178 HE 179
>ref|XP_002327353.1| predicted protein [Populus trichocarpa] gi|222835723|gb|EEE74158.1|
predicted protein [Populus trichocarpa]
Length = 335
Score = 229 bits (585), Expect = 1e-58
Identities = 103/154 (66%), Positives = 125/154 (81%), Gaps = 1/154 (0%)
Frame = -1
Query: 459 LDSVEAICSEPGCMKSFSNVDCLKAHLQSCHRHIQCGVCGTQQLRKNIKRHMRTHE-AGC 283
LD VEA+C EPGCMK FSN +CLKAH+QS H++I C +CGT+QL+KNIKRH+RTHE A
Sbjct: 174 LDHVEAMCLEPGCMKHFSNKECLKAHIQSSHQYINCDICGTKQLKKNIKRHLRTHEPASD 233
Query: 282 TLEQFKCHIDDCCHTFTSKSNLNQHIKAVHLELRPYTCRFTGCGKKFPFKHVRDNHEKTG 103
+ E+ KCH + C HTF++K+NLNQH+KAVHLE RP+ C F GC +F +KHVRDNHEK+G
Sbjct: 234 STERIKCHFNGCQHTFSTKTNLNQHVKAVHLEHRPFLCGFPGCDMRFSYKHVRDNHEKSG 293
Query: 102 EHVYIQGDFEEADEQFRSRPRGGRKRKCPTVETL 1
HVY GDF E+D QFRS+PRGGRKRK PTVE L
Sbjct: 294 LHVYTPGDFVESDRQFRSKPRGGRKRKFPTVEML 327
Score = 54.3 bits (129), Expect = 1e-05
Identities = 38/118 (32%), Positives = 52/118 (44%), Gaps = 14/118 (11%)
Frame = -1
Query: 423 CMKSFSNVDCLKAHLQS--CHRHIQC--GVCGTQQLRKN-IKRHMRTHEAGCTLEQFKCH 259
C SF L H+QS R +C C RK+ + RH+ HE + FKC
Sbjct: 55 CGASFKKPAYLIQHMQSHSLERPFKCLFDDCHASYRRKDHLTRHLLQHEG----KLFKCQ 110
Query: 258 IDDCCHTFTSKSNLNQHIKAVHLELRP---------YTCRFTGCGKKFPFKHVRDNHE 112
I++C F SNL +H++ +H E P Y C+ GCGK F + HE
Sbjct: 111 IENCNREFVYPSNLKRHVRELHDESSPSCSFGGEKQYVCQEPGCGKAFRYPSKLRKHE 168
>ref|NP_001234471.1| transcription factor IIIA [Solanum lycopersicum]
gi|115279797|gb|ABI85391.1| transcription factor IIIA
[Solanum lycopersicum] gi|115279800|gb|ABI85393.1|
transcription factor IIIA [Solanum lycopersicum]
Length = 372
Score = 221 bits (562), Expect = 6e-56
Identities = 96/153 (62%), Positives = 120/153 (78%)
Frame = -1
Query: 459 LDSVEAICSEPGCMKSFSNVDCLKAHLQSCHRHIQCGVCGTQQLRKNIKRHMRTHEAGCT 280
L++VEA+C EPGCMK F+N CLK H++SCH+HI C +CGT+QL+KNIKRH+RTHE G
Sbjct: 186 LETVEAMCLEPGCMKHFTNEKCLKEHIESCHQHIDCEICGTKQLKKNIKRHLRTHEEGPI 245
Query: 279 LEQFKCHIDDCCHTFTSKSNLNQHIKAVHLELRPYTCRFTGCGKKFPFKHVRDNHEKTGE 100
E+ KC DC HTF+S+SNL QHIKAVH+ +P++C +GCG KF FKHVRD HE++G
Sbjct: 246 SERIKCEFQDCLHTFSSRSNLAQHIKAVHVGSKPFSCSISGCGMKFAFKHVRDKHEQSGC 305
Query: 99 HVYIQGDFEEADEQFRSRPRGGRKRKCPTVETL 1
HVY GDFEE DEQF SRPRGGRKR+ E++
Sbjct: 306 HVYTPGDFEEVDEQFLSRPRGGRKREPTLFESI 338
Score = 56.2 bits (134), Expect = 3e-06
Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 13/132 (9%)
Frame = -1
Query: 441 ICSEPGCMKSFSNVDCLKAHLQS--CHRHIQCGV--CGTQQLRKN-IKRHMRTHEAGCTL 277
IC E C +F LK HLQS R C + C + RK+ + RH+ H+
Sbjct: 64 ICEE--CGATFQKPAHLKQHLQSHSLERPFVCHIDDCQSSYRRKDHLSRHLLLHQG---- 117
Query: 276 EQFKCHIDDCCHTFTSKSNLNQHIKAVH-------LEL-RPYTCRFTGCGKKFPFKHVRD 121
+ F+C +D C TF+ + N+ +H+K +H ++L + Y C GCGK F +
Sbjct: 118 KLFECPVDGCKSTFSFQGNMTRHVKEMHDQPASAEVDLPKEYVCSEAGCGKVFKYASKLR 177
Query: 120 NHEKTGEHVYIQ 85
HE + HV ++
Sbjct: 178 KHEDS--HVKLE 187