BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016691
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149702.1| PREDICTED: U-box domain-containing protein 4...   233   2e-59
ref|XP_002524955.1| ubiquitin-protein ligase, putative [Ricinus ...   233   2e-59
ref|XP_002332232.1| predicted protein [Populus trichocarpa] gi|2...   231   3e-59
ref|XP_002306495.1| predicted protein [Populus trichocarpa] gi|2...   230   1e-58
gb|AAO61490.1| arm repeat-containing protein [Nicotiana tabacum]      228   4e-58

>ref|XP_004149702.1| PREDICTED: U-box domain-containing protein 4-like [Cucumis sativus]
            gi|449524872|ref|XP_004169445.1| PREDICTED: U-box
            domain-containing protein 4-like [Cucumis sativus]
          Length = 841

 Score =  233 bits (593), Expect = 2e-59
 Identities = 119/138 (86%), Positives = 128/138 (92%)
 Frame = -2

Query: 414  NKVRIGRSGAIGPLVELLGNGTPRGKKDAATALFNLSVFHENKARIVQAGAARYLVELMD 235
            NKV+IGRSGAIGPLVELLGNGTPRGKKDAATALFNLS+FHENKARIVQAGA R+LVELMD
Sbjct: 672  NKVKIGRSGAIGPLVELLGNGTPRGKKDAATALFNLSIFHENKARIVQAGAVRHLVELMD 731

Query: 234  PAAAMVDKAVAVLSNLATIPEGRSAIGQAGGIPLLVDAVELGSARVKEHAAAALLLLCTN 55
            PAA MVDKAVAVL+NLATIPEGRSAIGQ GGIP+LV+ VELGSAR KE+AAAALL LCT 
Sbjct: 732  PAAGMVDKAVAVLANLATIPEGRSAIGQEGGIPVLVEVVELGSARGKENAAAALLQLCTT 791

Query: 54   SSRFCGMVLQQGPVPPLV 1
            S+R C MVLQ+G VPPLV
Sbjct: 792  SNRHCSMVLQEGAVPPLV 809



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 49/142 (34%), Positives = 77/142 (54%), Gaps = 4/142 (2%)
 Frame = -2

Query: 414  NKVRIGRSGAIGPLVELLGNGTPRGKKDAATALFNLSVFHENKARIVQAGAARYLVELMD 235
            N++ I + GAI  LV LL +   + +++A TAL NLS+   NK+ I QA A   L+ ++ 
Sbjct: 590  NRIVIAQCGAIDYLVGLLLSEDSKIQENAVTALLNLSINDNNKSAIAQANAIEPLIHVLK 649

Query: 234  PAAAMV-DKAVAVLSNLATIPEGRSAIGQAGGIPLLVDAVELGSARVKEHAAAALLLLC- 61
              +    + + A L +L+ I E +  IG++G I  LV+ +  G+ R K+ AA AL  L  
Sbjct: 650  TGSPEAKENSAATLFSLSVIEENKVKIGRSGAIGPLVELLGNGTPRGKKDAATALFNLSI 709

Query: 60   --TNSSRFCGMVLQQGPVPPLV 1
               N +R    ++Q G V  LV
Sbjct: 710  FHENKAR----IVQAGAVRHLV 727


>ref|XP_002524955.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223535790|gb|EEF37452.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 799

 Score =  233 bits (593), Expect = 2e-59
 Identities = 117/138 (84%), Positives = 129/138 (93%)
 Frame = -2

Query: 414  NKVRIGRSGAIGPLVELLGNGTPRGKKDAATALFNLSVFHENKARIVQAGAARYLVELMD 235
            NKVRIGRSGA+GPLV+LLGNGTPRGKKDAATALFNLS+FHENKARIVQAGA ++LVELMD
Sbjct: 631  NKVRIGRSGAVGPLVDLLGNGTPRGKKDAATALFNLSIFHENKARIVQAGAVKHLVELMD 690

Query: 234  PAAAMVDKAVAVLSNLATIPEGRSAIGQAGGIPLLVDAVELGSARVKEHAAAALLLLCTN 55
            PAA MVDKAVAVL+NLATIPEGR+AIGQ GGIP+LV+ VELGSAR KE+AAAALL LCTN
Sbjct: 691  PAAGMVDKAVAVLANLATIPEGRTAIGQEGGIPVLVEVVELGSARGKENAAAALLQLCTN 750

Query: 54   SSRFCGMVLQQGPVPPLV 1
            S+RFC  VLQ+G VPPLV
Sbjct: 751  SNRFCNTVLQEGAVPPLV 768



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 47/142 (33%), Positives = 75/142 (52%), Gaps = 4/142 (2%)
 Frame = -2

Query: 414 NKVRIGRSGAIGPLVELLGNGTPRGKKDAATALFNLSVFHENKARIVQAGAARYLVELMD 235
           N++ I   GAI  LV LL +   + +++A TAL NLS+   NK  I  A A   L+ +++
Sbjct: 549 NRIVIANCGAINILVNLLRSADAKIQENAVTALLNLSINDNNKTAIANADAIGPLIHVLE 608

Query: 234 PAAAMV-DKAVAVLSNLATIPEGRSAIGQAGGIPLLVDAVELGSARVKEHAAAALLLLC- 61
             +    + + A L +L+ I + +  IG++G +  LVD +  G+ R K+ AA AL  L  
Sbjct: 609 TGSPEAKENSAATLFSLSVIEDNKVRIGRSGAVGPLVDLLGNGTPRGKKDAATALFNLSI 668

Query: 60  --TNSSRFCGMVLQQGPVPPLV 1
              N +R    ++Q G V  LV
Sbjct: 669 FHENKAR----IVQAGAVKHLV 686


>ref|XP_002332232.1| predicted protein [Populus trichocarpa] gi|222831845|gb|EEE70322.1|
           predicted protein [Populus trichocarpa]
          Length = 698

 Score =  231 bits (590), Expect = 3e-59
 Identities = 116/138 (84%), Positives = 129/138 (93%)
 Frame = -2

Query: 414 NKVRIGRSGAIGPLVELLGNGTPRGKKDAATALFNLSVFHENKARIVQAGAARYLVELMD 235
           NKVRIGRSGA+GPLV+LLGNGTPRGKKDAATALFNLS+FHENKARIV+AGA ++LV+LMD
Sbjct: 530 NKVRIGRSGAVGPLVDLLGNGTPRGKKDAATALFNLSIFHENKARIVEAGAVKHLVDLMD 589

Query: 234 PAAAMVDKAVAVLSNLATIPEGRSAIGQAGGIPLLVDAVELGSARVKEHAAAALLLLCTN 55
           PAA MVDKAVAVL+NLATIPEGR+AIGQ GGIP+LV+ VELGS R KE+AAAALL LCTN
Sbjct: 590 PAAGMVDKAVAVLANLATIPEGRNAIGQEGGIPVLVEVVELGSVRGKENAAAALLQLCTN 649

Query: 54  SSRFCGMVLQQGPVPPLV 1
           SSRFC MVLQ+G VPPLV
Sbjct: 650 SSRFCHMVLQEGAVPPLV 667



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 40/118 (33%), Positives = 66/118 (55%), Gaps = 1/118 (0%)
 Frame = -2

Query: 414 NKVRIGRSGAIGPLVELLGNGTPRGKKDAATALFNLSVFHENKARIVQAGAARYLVELMD 235
           N++ I   G+IG LV LL +   + +++A TAL NLS+   NK  I  A A   L+ +++
Sbjct: 448 NRIVIANCGSIGLLVNLLCSTDKKIQENAVTALLNLSINDNNKTAIANADAIEPLIHVLE 507

Query: 234 PAAAMV-DKAVAVLSNLATIPEGRSAIGQAGGIPLLVDAVELGSARVKEHAAAALLLL 64
             +    + + A L +L+ I + +  IG++G +  LVD +  G+ R K+ AA AL  L
Sbjct: 508 TGSPEAKENSAATLFSLSVIEDNKVRIGRSGAVGPLVDLLGNGTPRGKKDAATALFNL 565


>ref|XP_002306495.1| predicted protein [Populus trichocarpa] gi|222855944|gb|EEE93491.1|
            predicted protein [Populus trichocarpa]
          Length = 822

 Score =  230 bits (586), Expect = 1e-58
 Identities = 118/138 (85%), Positives = 128/138 (92%)
 Frame = -2

Query: 414  NKVRIGRSGAIGPLVELLGNGTPRGKKDAATALFNLSVFHENKARIVQAGAARYLVELMD 235
            NKVRIGRSGAI PLV+LLGNGTPRGKKDAATALFNLS+FHENK RIVQAGA ++LVELMD
Sbjct: 653  NKVRIGRSGAIVPLVDLLGNGTPRGKKDAATALFNLSIFHENKDRIVQAGAVKHLVELMD 712

Query: 234  PAAAMVDKAVAVLSNLATIPEGRSAIGQAGGIPLLVDAVELGSARVKEHAAAALLLLCTN 55
            PAA MVDKAVAVL+NLATIPEGR+AIGQ GGIP+LV+ VELGSAR KE+AAAALL LCTN
Sbjct: 713  PAAGMVDKAVAVLANLATIPEGRNAIGQEGGIPVLVEVVELGSARGKENAAAALLQLCTN 772

Query: 54   SSRFCGMVLQQGPVPPLV 1
            SSRFC MVLQ+G VPPLV
Sbjct: 773  SSRFCHMVLQEGAVPPLV 790



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 48/142 (33%), Positives = 74/142 (52%), Gaps = 4/142 (2%)
 Frame = -2

Query: 414 NKVRIGRSGAIGPLVELLGNGTPRGKKDAATALFNLSVFHENKARIVQAGAARYLVELMD 235
           N++ I   GAI  LV LL +   + +++A TAL NLS+   NK  I  A A   L+ +++
Sbjct: 571 NRIVIANFGAISLLVNLLRSTDIKIQENAVTALLNLSINDNNKTAIGNADAIEPLIHVLE 630

Query: 234 PAAAMV-DKAVAVLSNLATIPEGRSAIGQAGGIPLLVDAVELGSARVKEHAAAALLLLC- 61
             +    + + A L +L+ I + +  IG++G I  LVD +  G+ R K+ AA AL  L  
Sbjct: 631 TGSPEAKENSAATLFSLSVIEDNKVRIGRSGAIVPLVDLLGNGTPRGKKDAATALFNLSI 690

Query: 60  --TNSSRFCGMVLQQGPVPPLV 1
              N  R    ++Q G V  LV
Sbjct: 691 FHENKDR----IVQAGAVKHLV 708


>gb|AAO61490.1| arm repeat-containing protein [Nicotiana tabacum]
          Length = 790

 Score =  228 bits (581), Expect = 4e-58
 Identities = 115/138 (83%), Positives = 126/138 (91%)
 Frame = -2

Query: 414  NKVRIGRSGAIGPLVELLGNGTPRGKKDAATALFNLSVFHENKARIVQAGAARYLVELMD 235
            NK++IGRSGAI PLV+LLGNGTPRGKKDAATALFNLS+ HENK+RI+QAGA +YLVELMD
Sbjct: 621  NKMKIGRSGAIKPLVDLLGNGTPRGKKDAATALFNLSILHENKSRIIQAGAVKYLVELMD 680

Query: 234  PAAAMVDKAVAVLSNLATIPEGRSAIGQAGGIPLLVDAVELGSARVKEHAAAALLLLCTN 55
            PA  MVDKAVAVLSNLATIPEGR+ IGQ GGIPLLV+ VELGSAR KE+AAAALL LCTN
Sbjct: 681  PATGMVDKAVAVLSNLATIPEGRAEIGQEGGIPLLVEVVELGSARGKENAAAALLQLCTN 740

Query: 54   SSRFCGMVLQQGPVPPLV 1
            SSRFC MVLQ+G VPPLV
Sbjct: 741  SSRFCNMVLQEGAVPPLV 758



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 51/142 (35%), Positives = 76/142 (53%), Gaps = 4/142 (2%)
 Frame = -2

Query: 414 NKVRIGRSGAIGPLVELLGNGTPRGKKDAATALFNLSVFHENKARIVQAGAARYLVELMD 235
           N++ I   GAI  LV LL +   + ++DA TAL NLS+   NK  I  A A   L+ ++ 
Sbjct: 539 NRMVIANCGAISSLVNLLHSKDMKVQEDAVTALLNLSINDNNKCAIANADAIEPLIHVLQ 598

Query: 234 PAAAMV-DKAVAVLSNLATIPEGRSAIGQAGGIPLLVDAVELGSARVKEHAAAALL---L 67
             +A   + + A L +L+ + E +  IG++G I  LVD +  G+ R K+ AA AL    +
Sbjct: 599 TGSAEAKENSAATLFSLSVMEENKMKIGRSGAIKPLVDLLGNGTPRGKKDAATALFNLSI 658

Query: 66  LCTNSSRFCGMVLQQGPVPPLV 1
           L  N SR    ++Q G V  LV
Sbjct: 659 LHENKSR----IIQAGAVKYLV 676