BLASTX nr result

ID: Coptis23_contig00016681 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016681
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633085.1| PREDICTED: uncharacterized protein LOC100242...   121   5e-26
ref|XP_002511060.1| conserved hypothetical protein [Ricinus comm...   106   2e-21
ref|XP_002321771.1| predicted protein [Populus trichocarpa] gi|2...   102   2e-20
ref|XP_002871267.1| predicted protein [Arabidopsis lyrata subsp....    96   2e-18
ref|NP_001031848.1| uncharacterized protein [Arabidopsis thalian...    94   9e-18

>ref|XP_003633085.1| PREDICTED: uncharacterized protein LOC100242180 [Vitis vinifera]
           gi|297738488|emb|CBI27733.3| unnamed protein product
           [Vitis vinifera]
          Length = 646

 Score =  121 bits (304), Expect = 5e-26
 Identities = 60/92 (65%), Positives = 72/92 (78%)
 Frame = -1

Query: 280 PCQTCRCHGFPLDGSGGNKSRRPSSCSITCQELMTSDLFDNAVKVGDHTLLFLPSFQSFP 101
           PCQTCRCHG PLD   GNK + PS C +T  +L T DL +N VK+G+ T+LFLPSF+SF 
Sbjct: 249 PCQTCRCHGIPLDDVIGNKIKVPS-CWVTGVKLGTYDLIENFVKIGEQTMLFLPSFKSFM 307

Query: 100 DFQQVSAPIIFNVIERTNLGSLNEGAIIGSSY 5
             QQVS+PI FN+IERTNLGSL+EG IIG+SY
Sbjct: 308 KLQQVSSPIDFNIIERTNLGSLSEGLIIGNSY 339


>ref|XP_002511060.1| conserved hypothetical protein [Ricinus communis]
           gi|223550175|gb|EEF51662.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 653

 Score =  106 bits (265), Expect = 2e-21
 Identities = 53/91 (58%), Positives = 66/91 (72%)
 Frame = -1

Query: 277 CQTCRCHGFPLDGSGGNKSRRPSSCSITCQELMTSDLFDNAVKVGDHTLLFLPSFQSFPD 98
           CQTCRCHG  LD +  +K  R  SC +T  +L T+D+ DN+VKVGD T+LF+PSFQS   
Sbjct: 261 CQTCRCHGVLLDHAAKDKLER-LSCPVTGHDLGTADVVDNSVKVGDKTILFMPSFQSSMK 319

Query: 97  FQQVSAPIIFNVIERTNLGSLNEGAIIGSSY 5
             Q+S+PI FN+IERTNL SLNEG I G+ Y
Sbjct: 320 VHQLSSPIEFNIIERTNLKSLNEGVIFGTPY 350


>ref|XP_002321771.1| predicted protein [Populus trichocarpa] gi|222868767|gb|EEF05898.1|
           predicted protein [Populus trichocarpa]
          Length = 620

 Score =  102 bits (255), Expect = 2e-20
 Identities = 52/91 (57%), Positives = 68/91 (74%)
 Frame = -1

Query: 277 CQTCRCHGFPLDGSGGNKSRRPSSCSITCQELMTSDLFDNAVKVGDHTLLFLPSFQSFPD 98
           C+TCRCHG  LD    +K +  +SC IT ++L  SD+ +N+V+VGD T+LF+PSFQS   
Sbjct: 257 CETCRCHGSVLDNRIKDK-KVGASCPITGRDLEISDVIENSVQVGDKTVLFMPSFQSSMK 315

Query: 97  FQQVSAPIIFNVIERTNLGSLNEGAIIGSSY 5
            +QVS+PI FN+IER NL SL+EG IIGSSY
Sbjct: 316 LKQVSSPIDFNIIERANLSSLSEGLIIGSSY 346


>ref|XP_002871267.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297317104|gb|EFH47526.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 646

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 47/93 (50%), Positives = 62/93 (66%)
 Frame = -1

Query: 280 PCQTCRCHGFPLDGSGGNKSRRPSSCSITCQELMTSDLFDNAVKVGDHTLLFLPSFQSFP 101
           PC+TCRCHGFPL  S  N       CSIT  EL   D+ +N+VK+GD T+LFLPS  S  
Sbjct: 253 PCRTCRCHGFPLLDSVKNTMEN-LKCSITNHELGKYDVIENSVKIGDRTVLFLPSIHSLQ 311

Query: 100 DFQQVSAPIIFNVIERTNLGSLNEGAIIGSSYV 2
               +S+ + F+VIERTNL SL+EG ++G+ Y+
Sbjct: 312 KLHPISSQVDFHVIERTNLTSLSEGLLLGTPYI 344


>ref|NP_001031848.1| uncharacterized protein [Arabidopsis thaliana]
           gi|79508236|ref|NP_196355.2| uncharacterized protein
           [Arabidopsis thaliana] gi|55978831|gb|AAV68877.1|
           hypothetical protein AT5G07380 [Arabidopsis thaliana]
           gi|55978833|gb|AAV68878.1| hypothetical protein
           AT5G07380 [Arabidopsis thaliana]
           gi|61742743|gb|AAX55192.1| hypothetical protein
           At5g07380 [Arabidopsis thaliana]
           gi|332003765|gb|AED91148.1| uncharacterized protein
           [Arabidopsis thaliana] gi|332003766|gb|AED91149.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 641

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 47/93 (50%), Positives = 59/93 (63%)
 Frame = -1

Query: 280 PCQTCRCHGFPLDGSGGNKSRRPSSCSITCQELMTSDLFDNAVKVGDHTLLFLPSFQSFP 101
           PCQTCRCHG PL  S   K      CS+T  EL   D+ +N+VKVG+ T LFLP+  S  
Sbjct: 252 PCQTCRCHGIPLQDSV-EKPTEKLKCSVTNHELGKYDVIENSVKVGNRTTLFLPTIHSLQ 310

Query: 100 DFQQVSAPIIFNVIERTNLGSLNEGAIIGSSYV 2
               VS+ + FNVIERTNL SL+EG ++G  Y+
Sbjct: 311 KLHPVSSQVDFNVIERTNLTSLSEGLLLGIPYI 343


Top