BLASTX nr result

ID: Coptis23_contig00016680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016680
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321771.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
ref|XP_003633085.1| PREDICTED: uncharacterized protein LOC100242...   112   2e-23
ref|XP_002457534.1| hypothetical protein SORBIDRAFT_03g008910 [S...   108   4e-22
gb|AFW79749.1| hypothetical protein ZEAMMB73_196585, partial [Ze...   107   1e-21
ref|XP_003568704.1| PREDICTED: uncharacterized protein LOC100834...   106   2e-21

>ref|XP_002321771.1| predicted protein [Populus trichocarpa] gi|222868767|gb|EEF05898.1|
           predicted protein [Populus trichocarpa]
          Length = 620

 Score =  114 bits (284), Expect = 1e-23
 Identities = 58/103 (56%), Positives = 71/103 (68%)
 Frame = +3

Query: 9   LSDAADKCVSVEFVLLEQERGDSNDASRNVQDFLNSISDLENCSLRNYLPDTWILSGLVK 188
           L DAADKCVSVEFVL EQ      +   N+  F+ SISDL+N S   YL D+ +   LVK
Sbjct: 149 LMDAADKCVSVEFVLFEQSSSHLGNFQENINSFMRSISDLDNFSFGTYLADSRVFHSLVK 208

Query: 189 RWLQELKDTLEELLQAAFLFKNDLAGSTDRILCNLFTSAEQII 317
           RWLQELKD +EE LQA F+FK++L GS ++I C+L TS  QII
Sbjct: 209 RWLQELKDDMEEPLQARFIFKSNLTGSLNQIFCSLSTSVCQII 251


>ref|XP_003633085.1| PREDICTED: uncharacterized protein LOC100242180 [Vitis vinifera]
           gi|297738488|emb|CBI27733.3| unnamed protein product
           [Vitis vinifera]
          Length = 646

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/102 (53%), Positives = 69/102 (67%)
 Frame = +3

Query: 9   LSDAADKCVSVEFVLLEQERGDSNDASRNVQDFLNSISDLENCSLRNYLPDTWILSGLVK 188
           L +AADKCV VEFVL EQ+    +D   N+ +F   I DL+NCSL+ Y PD  +L GLVK
Sbjct: 142 LMEAADKCVLVEFVLFEQKSSHLSDIPDNIDNFAKQIHDLDNCSLQTYPPDVCVLHGLVK 201

Query: 189 RWLQELKDTLEELLQAAFLFKNDLAGSTDRILCNLFTSAEQI 314
           RWLQ+LKD +EE LQA F+FK +L GS ++I CN   S   I
Sbjct: 202 RWLQDLKDDIEEPLQACFIFKTNLVGSVNQISCNFSISFNHI 243


>ref|XP_002457534.1| hypothetical protein SORBIDRAFT_03g008910 [Sorghum bicolor]
           gi|241929509|gb|EES02654.1| hypothetical protein
           SORBIDRAFT_03g008910 [Sorghum bicolor]
          Length = 658

 Score =  108 bits (271), Expect = 4e-22
 Identities = 54/105 (51%), Positives = 71/105 (67%), Gaps = 1/105 (0%)
 Frame = +3

Query: 3   KILSDAADKCVSVEFVLLEQERGDS-NDASRNVQDFLNSISDLENCSLRNYLPDTWILSG 179
           K L DAA++CV+V+F++LE E       AS N   F+N I DLENC +R Y P+T +L G
Sbjct: 158 KSLMDAAEQCVAVDFIMLEAEAAFMYGGASENANSFVNRICDLENCVVRRYNPETQVLHG 217

Query: 180 LVKRWLQELKDTLEELLQAAFLFKNDLAGSTDRILCNLFTSAEQI 314
           LVKRWL+ELKD  E+ LQA F+F++ +  S   I CNL+ SA QI
Sbjct: 218 LVKRWLEELKDDKEDTLQAVFVFRDPIIDSAKHIYCNLYASANQI 262


>gb|AFW79749.1| hypothetical protein ZEAMMB73_196585, partial [Zea mays]
          Length = 687

 Score =  107 bits (266), Expect = 1e-21
 Identities = 53/105 (50%), Positives = 70/105 (66%), Gaps = 1/105 (0%)
 Frame = +3

Query: 3   KILSDAADKCVSVEFVLLEQERGDS-NDASRNVQDFLNSISDLENCSLRNYLPDTWILSG 179
           + L DAA++CV+V+F++LE E       AS N   F+N I DLENC +R Y P+T +L G
Sbjct: 158 RTLMDAAEQCVAVDFIMLEAEAAFMYGRASENANSFVNRICDLENCVVRRYNPETQVLHG 217

Query: 180 LVKRWLQELKDTLEELLQAAFLFKNDLAGSTDRILCNLFTSAEQI 314
           LVKRWL+ELKD  E+ LQA F+F + +  S   I CNL+ SA QI
Sbjct: 218 LVKRWLEELKDDKEDTLQAVFVFSDPIIDSVKHIYCNLYASANQI 262


>ref|XP_003568704.1| PREDICTED: uncharacterized protein LOC100834609 [Brachypodium
           distachyon]
          Length = 675

 Score =  106 bits (265), Expect = 2e-21
 Identities = 52/104 (50%), Positives = 73/104 (70%), Gaps = 1/104 (0%)
 Frame = +3

Query: 9   LSDAADKCVSVEFVLLEQERGDS-NDASRNVQDFLNSISDLENCSLRNYLPDTWILSGLV 185
           L DAA++C++VEFV+LE E     +D S N   F++ ISDLENC +R Y P+T +L GLV
Sbjct: 147 LMDAAEQCITVEFVILETEAVSMYDDVSENSNSFIHRISDLENCVIRRYSPETQVLHGLV 206

Query: 186 KRWLQELKDTLEELLQAAFLFKNDLAGSTDRILCNLFTSAEQII 317
           KRWL+ELKD  E+ LQA F+F+  +  S ++I C+++ S  QII
Sbjct: 207 KRWLEELKDDKEDTLQAVFVFRVPIIKSVNQISCSIYPSVNQII 250


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