BLASTX nr result
ID: Coptis23_contig00016662
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00016662
(540 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002513491.1| GTP-binding protein enga, putative [Ricinus ... 259 2e-67
ref|XP_004169435.1| PREDICTED: GTPase Der-like, partial [Cucumis... 256 2e-66
ref|XP_004142117.1| PREDICTED: GTPase Der-like [Cucumis sativus] 256 2e-66
ref|XP_002282837.2| PREDICTED: GTPase Der-like [Vitis vinifera] 247 9e-64
ref|XP_003539473.1| PREDICTED: GTPase Der-like [Glycine max] 246 1e-63
>ref|XP_002513491.1| GTP-binding protein enga, putative [Ricinus communis]
gi|223547399|gb|EEF48894.1| GTP-binding protein enga,
putative [Ricinus communis]
Length = 624
Score = 259 bits (661), Expect = 2e-67
Identities = 135/178 (75%), Positives = 150/178 (84%)
Frame = +2
Query: 5 SLNTEQLEEEARKVAREYSISLSRELAIEDTDDGKETRRKQRKRTXXXXXXVPDRLLPKV 184
+++ + LE+EA V REYS SLSR+L IED D K+ RKQ KR +PD LLP+V
Sbjct: 85 AIDIDALEQEAEDVVREYSTSLSRQLRIEDDSDDKKETRKQ-KRQKFTIPDIPDNLLPRV 143
Query: 185 TIVGRPNVGKSALFNRLVGGNNAIVVDEPGVTRDRLYGRSFWGNHEFMVVDTGGVLTVSK 364
IVGRPNVGKSALFNRLVGGN AIVVDEPGVTRDRLYGRSFWG+ EFMVVDTGGVLT+S+
Sbjct: 144 AIVGRPNVGKSALFNRLVGGNKAIVVDEPGVTRDRLYGRSFWGDFEFMVVDTGGVLTISQ 203
Query: 365 SQANIMEDLAITTTIGMEGISLASREAAVARMPSMIERQATAAVEEASAIIFLVDGQA 538
SQ N+MEDLAITTTIGM+GI LASREAAVARMPSMIERQA AAVEE+S IIFLVDGQA
Sbjct: 204 SQDNVMEDLAITTTIGMDGIPLASREAAVARMPSMIERQAAAAVEESSVIIFLVDGQA 261
>ref|XP_004169435.1| PREDICTED: GTPase Der-like, partial [Cucumis sativus]
Length = 414
Score = 256 bits (653), Expect = 2e-66
Identities = 132/179 (73%), Positives = 153/179 (85%), Gaps = 1/179 (0%)
Frame = +2
Query: 5 SLNTEQLEEEARKVAREYSISLSRELAIEDT-DDGKETRRKQRKRTXXXXXXVPDRLLPK 181
+++ E EEEA+ V REYS SLSREL I+D D ET RK++KR +PD LLP+
Sbjct: 100 TIDVEAFEEEAKDVLREYSSSLSRELIIDDELSDQSETGRKKKKRKTTPRNVIPDHLLPR 159
Query: 182 VTIVGRPNVGKSALFNRLVGGNNAIVVDEPGVTRDRLYGRSFWGNHEFMVVDTGGVLTVS 361
V IVGRPNVGKSA+FNRLVGGN AIVVDEPGVTRDRLYGRSFWG++EFMVVDTGGVL+VS
Sbjct: 160 VAIVGRPNVGKSAMFNRLVGGNRAIVVDEPGVTRDRLYGRSFWGDNEFMVVDTGGVLSVS 219
Query: 362 KSQANIMEDLAITTTIGMEGISLASREAAVARMPSMIERQATAAVEEASAIIFLVDGQA 538
K+Q +++E+LAI+TTIGM+GI LASREAAVARMPSMIERQATAAVEEAS +IFLVDGQA
Sbjct: 220 KTQNDVIEELAISTTIGMDGIPLASREAAVARMPSMIERQATAAVEEASVVIFLVDGQA 278
>ref|XP_004142117.1| PREDICTED: GTPase Der-like [Cucumis sativus]
Length = 660
Score = 256 bits (653), Expect = 2e-66
Identities = 132/179 (73%), Positives = 153/179 (85%), Gaps = 1/179 (0%)
Frame = +2
Query: 5 SLNTEQLEEEARKVAREYSISLSRELAIEDT-DDGKETRRKQRKRTXXXXXXVPDRLLPK 181
+++ E EEEA+ V REYS SLSREL I+D D ET RK++KR +PD LLP+
Sbjct: 100 TIDVEAFEEEAKDVLREYSSSLSRELIIDDELSDQSETGRKKKKRKTTPRNVIPDHLLPR 159
Query: 182 VTIVGRPNVGKSALFNRLVGGNNAIVVDEPGVTRDRLYGRSFWGNHEFMVVDTGGVLTVS 361
V IVGRPNVGKSA+FNRLVGGN AIVVDEPGVTRDRLYGRSFWG++EFMVVDTGGVL+VS
Sbjct: 160 VAIVGRPNVGKSAMFNRLVGGNRAIVVDEPGVTRDRLYGRSFWGDNEFMVVDTGGVLSVS 219
Query: 362 KSQANIMEDLAITTTIGMEGISLASREAAVARMPSMIERQATAAVEEASAIIFLVDGQA 538
K+Q +++E+LAI+TTIGM+GI LASREAAVARMPSMIERQATAAVEEAS +IFLVDGQA
Sbjct: 220 KTQNDVIEELAISTTIGMDGIPLASREAAVARMPSMIERQATAAVEEASVVIFLVDGQA 278
>ref|XP_002282837.2| PREDICTED: GTPase Der-like [Vitis vinifera]
Length = 676
Score = 247 bits (630), Expect = 9e-64
Identities = 127/180 (70%), Positives = 153/180 (85%), Gaps = 2/180 (1%)
Frame = +2
Query: 5 SLNTEQLEEEARKVAREYSISLSRELAIEDTDDGKETRRK--QRKRTXXXXXXVPDRLLP 178
SL+ + LEEEA+ REYS LSR+L+IE+ D E + + ++K++ +PD LLP
Sbjct: 115 SLDVDALEEEAKHAVREYSRFLSRQLSIEE-DGANELKGRGGKQKKSKSTTRNIPDHLLP 173
Query: 179 KVTIVGRPNVGKSALFNRLVGGNNAIVVDEPGVTRDRLYGRSFWGNHEFMVVDTGGVLTV 358
+VTIVGRPNVGKSALFNRLVGGN AIVVDEPGVTRDRLYGR+FWG++EFMV+DTGGVLT+
Sbjct: 174 RVTIVGRPNVGKSALFNRLVGGNKAIVVDEPGVTRDRLYGRAFWGDYEFMVIDTGGVLTI 233
Query: 359 SKSQANIMEDLAITTTIGMEGISLASREAAVARMPSMIERQATAAVEEASAIIFLVDGQA 538
SKSQ N+ME+LAIT TIGM+GI LASREAAVARMP+MIE+QATAA+EE+S IIFLVDGQA
Sbjct: 234 SKSQDNVMEELAITKTIGMDGIPLASREAAVARMPTMIEKQATAAIEESSVIIFLVDGQA 293
>ref|XP_003539473.1| PREDICTED: GTPase Der-like [Glycine max]
Length = 632
Score = 246 bits (629), Expect = 1e-63
Identities = 131/184 (71%), Positives = 149/184 (80%), Gaps = 5/184 (2%)
Frame = +2
Query: 2 DSLNTEQLEEEARKVAREYSISLSRELAIEDTD-----DGKETRRKQRKRTXXXXXXVPD 166
D L+ LE+EA+ YS SLS+ L+IED + + ++RRK +RT +PD
Sbjct: 71 DDLDLVALEQEAKDAVEAYSSSLSQILSIEDEEKSDRKESAQSRRKSPRRTKI----IPD 126
Query: 167 RLLPKVTIVGRPNVGKSALFNRLVGGNNAIVVDEPGVTRDRLYGRSFWGNHEFMVVDTGG 346
LLP+V IVGRPNVGKSALFNRLVGGN AIVVDEPGVTRDRLYGRS+WG HEFMVVDTGG
Sbjct: 127 NLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRLYGRSYWGEHEFMVVDTGG 186
Query: 347 VLTVSKSQANIMEDLAITTTIGMEGISLASREAAVARMPSMIERQATAAVEEASAIIFLV 526
V+TVSKSQA +ME+LAITTTIGM+GI LA REAAVARMPSMIERQATAAVEE+S IIFLV
Sbjct: 187 VITVSKSQATVMEELAITTTIGMDGIPLAVREAAVARMPSMIERQATAAVEESSVIIFLV 246
Query: 527 DGQA 538
DGQA
Sbjct: 247 DGQA 250