BLASTX nr result

ID: Coptis23_contig00016658 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016658
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149299.1| PREDICTED: cytochrome c-type biogenesis prot...   112   4e-23
gb|ABK22611.1| unknown [Picea sitchensis]                             112   4e-23
ref|NP_001046539.1| Os02g0275100 [Oryza sativa Japonica Group] g...   110   9e-23
ref|NP_001235607.1| uncharacterized protein LOC100306221 [Glycin...   110   9e-23
gb|EEC72904.1| hypothetical protein OsI_06730 [Oryza sativa Indi...   110   9e-23

>ref|XP_004149299.1| PREDICTED: cytochrome c-type biogenesis protein CcmH-like [Cucumis
           sativus] gi|449507764|ref|XP_004163124.1| PREDICTED:
           cytochrome c-type biogenesis protein CcmH-like [Cucumis
           sativus]
          Length = 158

 Score =  112 bits (279), Expect = 4e-23
 Identities = 53/67 (79%), Positives = 61/67 (91%)
 Frame = -1

Query: 202 AVTKQRIVDARARNISHNVRCTECGGQSIEDSQADIAILLRQIIRDEIRGGKSDKEIYKR 23
           A+ K ++V+ARARNISHNVRC ECG QSIEDSQADIAILLR++IRDEIR GKSDK+IYK+
Sbjct: 7   ALKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKDIYKK 66

Query: 22  LEKDYGE 2
           LE DYGE
Sbjct: 67  LENDYGE 73


>gb|ABK22611.1| unknown [Picea sitchensis]
          Length = 155

 Score =  112 bits (279), Expect = 4e-23
 Identities = 53/64 (82%), Positives = 60/64 (93%)
 Frame = -1

Query: 193 KQRIVDARARNISHNVRCTECGGQSIEDSQADIAILLRQIIRDEIRGGKSDKEIYKRLEK 14
           K+  +DARARNISHNVRCTECG QSIEDSQADIAILLR++IRDEIR GKSDKEI+++LEK
Sbjct: 12  KKAEIDARARNISHNVRCTECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIFQKLEK 71

Query: 13  DYGE 2
           DYGE
Sbjct: 72  DYGE 75


>ref|NP_001046539.1| Os02g0275100 [Oryza sativa Japonica Group]
           gi|47848023|dbj|BAD21809.1| cytochrome c biogenesis
           protein-like [Oryza sativa Japonica Group]
           gi|47848060|dbj|BAD21845.1| cytochrome c biogenesis
           protein-like [Oryza sativa Japonica Group]
           gi|113536070|dbj|BAF08453.1| Os02g0275100 [Oryza sativa
           Japonica Group] gi|215769047|dbj|BAH01276.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222622594|gb|EEE56726.1| hypothetical protein
           OsJ_06229 [Oryza sativa Japonica Group]
          Length = 152

 Score =  110 bits (276), Expect = 9e-23
 Identities = 51/66 (77%), Positives = 62/66 (93%)
 Frame = -1

Query: 199 VTKQRIVDARARNISHNVRCTECGGQSIEDSQADIAILLRQIIRDEIRGGKSDKEIYKRL 20
           V +++I+++RARNISHNVRCTECG QSIEDSQADIAILLR++IRDEI+ GKSDKEIYK+L
Sbjct: 7   VKQRQIIESRARNISHNVRCTECGSQSIEDSQADIAILLRKLIRDEIKSGKSDKEIYKKL 66

Query: 19  EKDYGE 2
           + DYGE
Sbjct: 67  QADYGE 72


>ref|NP_001235607.1| uncharacterized protein LOC100306221 [Glycine max]
           gi|255627913|gb|ACU14301.1| unknown [Glycine max]
          Length = 159

 Score =  110 bits (276), Expect = 9e-23
 Identities = 53/67 (79%), Positives = 61/67 (91%)
 Frame = -1

Query: 202 AVTKQRIVDARARNISHNVRCTECGGQSIEDSQADIAILLRQIIRDEIRGGKSDKEIYKR 23
           AV K  IVDARARNISHNVRCTECG QSIEDSQADIAILLR++IRDEI+ GK+DK+IYK+
Sbjct: 7   AVKKAMIVDARARNISHNVRCTECGSQSIEDSQADIAILLRKLIRDEIQSGKTDKDIYKK 66

Query: 22  LEKDYGE 2
           LE ++GE
Sbjct: 67  LEDEFGE 73


>gb|EEC72904.1| hypothetical protein OsI_06730 [Oryza sativa Indica Group]
          Length = 152

 Score =  110 bits (276), Expect = 9e-23
 Identities = 51/66 (77%), Positives = 62/66 (93%)
 Frame = -1

Query: 199 VTKQRIVDARARNISHNVRCTECGGQSIEDSQADIAILLRQIIRDEIRGGKSDKEIYKRL 20
           V +++I+++RARNISHNVRCTECG QSIEDSQADIAILLR++IRDEI+ GKSDKEIYK+L
Sbjct: 7   VKQRQIIESRARNISHNVRCTECGSQSIEDSQADIAILLRKLIRDEIKSGKSDKEIYKKL 66

Query: 19  EKDYGE 2
           + DYGE
Sbjct: 67  QADYGE 72


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