BLASTX nr result

ID: Coptis23_contig00016652 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016652
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25354.3| unnamed protein product [Vitis vinifera]               98   7e-19
ref|XP_002275253.1| PREDICTED: U-box domain-containing protein 6...    98   7e-19
emb|CAN61689.1| hypothetical protein VITISV_024206 [Vitis vinifera]    98   7e-19
ref|XP_004169317.1| PREDICTED: U-box domain-containing protein 6...    63   2e-08
ref|XP_004146472.1| PREDICTED: U-box domain-containing protein 6...    63   2e-08

>emb|CBI25354.3| unnamed protein product [Vitis vinifera]
          Length = 384

 Score = 98.2 bits (243), Expect = 7e-19
 Identities = 51/87 (58%), Positives = 63/87 (72%), Gaps = 2/87 (2%)
 Frame = +2

Query: 272 KQSSSLGSSRGVLMKDGNNVNGVHSANNIRGSCSSGQHHQQGRVNHFENAVSIAEPD--L 445
           K  SS GS+R VLMKDG  V   +SA       S  ++H+QGR++H++NAV+IAEPD  +
Sbjct: 106 KDHSSFGSNRDVLMKDGAIVLSTNSAR-----ASPSENHRQGRISHYQNAVTIAEPDGDM 160

Query: 446 YYSQFLQGPEGSALAQKEIGGENGCGF 526
           YYSQFLQGPEGSA  QKE+  ENGCGF
Sbjct: 161 YYSQFLQGPEGSAPGQKELAVENGCGF 187


>ref|XP_002275253.1| PREDICTED: U-box domain-containing protein 62-like [Vitis vinifera]
          Length = 441

 Score = 98.2 bits (243), Expect = 7e-19
 Identities = 51/87 (58%), Positives = 63/87 (72%), Gaps = 2/87 (2%)
 Frame = +2

Query: 272 KQSSSLGSSRGVLMKDGNNVNGVHSANNIRGSCSSGQHHQQGRVNHFENAVSIAEPD--L 445
           K  SS GS+R VLMKDG  V   +SA       S  ++H+QGR++H++NAV+IAEPD  +
Sbjct: 163 KDHSSFGSNRDVLMKDGAIVLSTNSAR-----ASPSENHRQGRISHYQNAVTIAEPDGDM 217

Query: 446 YYSQFLQGPEGSALAQKEIGGENGCGF 526
           YYSQFLQGPEGSA  QKE+  ENGCGF
Sbjct: 218 YYSQFLQGPEGSAPGQKELAVENGCGF 244


>emb|CAN61689.1| hypothetical protein VITISV_024206 [Vitis vinifera]
          Length = 452

 Score = 98.2 bits (243), Expect = 7e-19
 Identities = 51/87 (58%), Positives = 63/87 (72%), Gaps = 2/87 (2%)
 Frame = +2

Query: 272 KQSSSLGSSRGVLMKDGNNVNGVHSANNIRGSCSSGQHHQQGRVNHFENAVSIAEPD--L 445
           K  SS GS+R VLMKDG  V   +SA       S  ++H+QGR++H++NAV+IAEPD  +
Sbjct: 163 KDHSSFGSNRDVLMKDGAIVLSTNSAR-----ASPSENHRQGRISHYQNAVTIAEPDGDM 217

Query: 446 YYSQFLQGPEGSALAQKEIGGENGCGF 526
           YYSQFLQGPEGSA  QKE+  ENGCGF
Sbjct: 218 YYSQFLQGPEGSAPGQKELAVENGCGF 244


>ref|XP_004169317.1| PREDICTED: U-box domain-containing protein 62-like [Cucumis
           sativus]
          Length = 380

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 38/96 (39%), Positives = 55/96 (57%), Gaps = 7/96 (7%)
 Frame = +2

Query: 260 ANLQKQSSSLGSSRGVLMKDGNNVNGVHSA---NNIRGSC--SSGQHHQQGRVNHFENAV 424
           +N  +   S G  +    K GN     HS+   + + GS   +  +++ QGR+ ++ NAV
Sbjct: 89  SNNDRSDQSSGGLKNGTDKLGNGKRKQHSSFVKDALAGSSGVTQSENNPQGRLGNYPNAV 148

Query: 425 SIAEPD--LYYSQFLQGPEGSALAQKEIGGENGCGF 526
           + AEPD   YYSQ+LQ  EGSA  QK++  ENGCGF
Sbjct: 149 TAAEPDSEAYYSQYLQSNEGSASEQKDLSIENGCGF 184


>ref|XP_004146472.1| PREDICTED: U-box domain-containing protein 62-like [Cucumis
           sativus]
          Length = 379

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 38/96 (39%), Positives = 55/96 (57%), Gaps = 7/96 (7%)
 Frame = +2

Query: 260 ANLQKQSSSLGSSRGVLMKDGNNVNGVHSA---NNIRGSC--SSGQHHQQGRVNHFENAV 424
           +N  +   S G  +    K GN     HS+   + + GS   +  +++ QGR+ ++ NAV
Sbjct: 88  SNNDRSDQSSGGLKNGTDKLGNGKRKQHSSFVKDALAGSSGVTQSENNPQGRLGNYPNAV 147

Query: 425 SIAEPD--LYYSQFLQGPEGSALAQKEIGGENGCGF 526
           + AEPD   YYSQ+LQ  EGSA  QK++  ENGCGF
Sbjct: 148 TAAEPDSEAYYSQYLQSNEGSASEQKDLSIENGCGF 183


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