BLASTX nr result
ID: Coptis23_contig00016641
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00016641
(646 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containi... 260 1e-67
ref|XP_002315895.1| predicted protein [Populus trichocarpa] gi|2... 259 4e-67
ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 253 2e-65
ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containi... 253 2e-65
ref|XP_002888819.1| pentatricopeptide repeat-containing protein ... 249 2e-64
>ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial [Vitis vinifera]
Length = 531
Score = 260 bits (665), Expect = 1e-67
Identities = 126/202 (62%), Positives = 153/202 (75%)
Frame = -1
Query: 646 LGAEKRLNEAIDFFEQSKISGFVPELPTYNALVGAYCWSERFKDACKVLKEMKKSGVLPN 467
LG+E+RL EA+ FFE+SK SGF PE PTYNA+VG+YC S R DA +++ EM+K GV P
Sbjct: 329 LGSERRLTEALQFFERSKASGFTPEAPTYNAVVGSYCQSMRMDDAYRIVDEMRKCGVGPQ 388
Query: 466 SRTYEIIIHHLIKNRRTKDAYRVFQEMESKFGCEPSANTYEIIVRMFCSEERVDMALQVW 287
+RTY+II+HHLIK RRTK+AYRVFQ M S+ GCEPS +TYEI+VRMFC+EERVDMAL+VW
Sbjct: 389 TRTYDIILHHLIKARRTKEAYRVFQGMSSEPGCEPSVSTYEIVVRMFCNEERVDMALRVW 448
Query: 286 KQMKAKGILPSMHMFSSLINGLSRDNKLDEACAYFQEMLDSGIRPPGPLFGNXXXXXXXX 107
+MKAKG+LP MHMFS+LIN L +NKLDEAC YF EMLD GIRPP +F N
Sbjct: 449 DEMKAKGVLPGMHMFSTLINSLCYENKLDEACKYFHEMLDMGIRPPAAMFSNLKQTLLDE 508
Query: 106 XXXXXXLSFGLKLDKIRKTRLV 41
L KLDKIR T+++
Sbjct: 509 GKQDMVLILAQKLDKIRTTQVI 530
Score = 95.9 bits (237), Expect = 6e-18
Identities = 50/166 (30%), Positives = 91/166 (54%)
Frame = -1
Query: 634 KRLNEAIDFFEQSKISGFVPELPTYNALVGAYCWSERFKDACKVLKEMKKSGVLPNSRTY 455
+++ EA++ FE+ + G P L +N L+ A C S + A +V +MK P+ ++Y
Sbjct: 193 RKVKEAVETFEKMEKFGLQPVLSDFNRLLDALCKSRHVERAQEVFDKMKDRKFRPDIKSY 252
Query: 454 EIIIHHLIKNRRTKDAYRVFQEMESKFGCEPSANTYEIIVRMFCSEERVDMALQVWKQMK 275
I++ + + V++EM+ + G EP A TY I++ C R D A++++ +M+
Sbjct: 253 TILLEGWGQEQNLLRLDEVYREMKDE-GFEPDAVTYGILINAHCKARRYDAAVELFHKME 311
Query: 274 AKGILPSMHMFSSLINGLSRDNKLDEACAYFQEMLDSGIRPPGPLF 137
A +P+ H++ +LINGL + +L EA +F+ SG P P +
Sbjct: 312 ANKCMPTPHIYCTLINGLGSERRLTEALQFFERSKASGFTPEAPTY 357
Score = 74.3 bits (181), Expect = 2e-11
Identities = 44/163 (26%), Positives = 80/163 (49%), Gaps = 1/163 (0%)
Frame = -1
Query: 619 AIDFFEQS-KISGFVPELPTYNALVGAYCWSERFKDACKVLKEMKKSGVLPNSRTYEIII 443
A+ FF + K GF YNAL+ A ++FK ++ +M+ G+L T+ +I
Sbjct: 128 ALSFFRWAEKQKGFKYSTENYNALIEALGKIKQFKMIWNLVNDMRSKGLL-TQETFALIS 186
Query: 442 HHLIKNRRTKDAYRVFQEMESKFGCEPSANTYEIIVRMFCSEERVDMALQVWKQMKAKGI 263
+ R+ K+A F++ME KFG +P + + ++ C V+ A +V+ +MK +
Sbjct: 187 RRYARARKVKEAVETFEKME-KFGLQPVLSDFNRLLDALCKSRHVERAQEVFDKMKDRKF 245
Query: 262 LPSMHMFSSLINGLSRDNKLDEACAYFQEMLDSGIRPPGPLFG 134
P + ++ L+ G ++ L ++EM D G P +G
Sbjct: 246 RPDIKSYTILLEGWGQEQNLLRLDEVYREMKDEGFEPDAVTYG 288
Score = 73.9 bits (180), Expect = 2e-11
Identities = 43/161 (26%), Positives = 81/161 (50%)
Frame = -1
Query: 634 KRLNEAIDFFEQSKISGFVPELPTYNALVGAYCWSERFKDACKVLKEMKKSGVLPNSRTY 455
+ + A + F++ K F P++ +Y L+ + + +V +EMK G P++ TY
Sbjct: 228 RHVERAQEVFDKMKDRKFRPDIKSYTILLEGWGQEQNLLRLDEVYREMKDEGFEPDAVTY 287
Query: 454 EIIIHHLIKNRRTKDAYRVFQEMESKFGCEPSANTYEIIVRMFCSEERVDMALQVWKQMK 275
I+I+ K RR A +F +ME+ C P+ + Y ++ SE R+ ALQ +++ K
Sbjct: 288 GILINAHCKARRYDAAVELFHKMEAN-KCMPTPHIYCTLINGLGSERRLTEALQFFERSK 346
Query: 274 AKGILPSMHMFSSLINGLSRDNKLDEACAYFQEMLDSGIRP 152
A G P +++++ + ++D+A EM G+ P
Sbjct: 347 ASGFTPEAPTYNAVVGSYCQSMRMDDAYRIVDEMRKCGVGP 387
>ref|XP_002315895.1| predicted protein [Populus trichocarpa] gi|222864935|gb|EEF02066.1|
predicted protein [Populus trichocarpa]
Length = 424
Score = 259 bits (661), Expect = 4e-67
Identities = 128/202 (63%), Positives = 154/202 (76%)
Frame = -1
Query: 646 LGAEKRLNEAIDFFEQSKISGFVPELPTYNALVGAYCWSERFKDACKVLKEMKKSGVLPN 467
LGAEKRL+EA++FFE SK SGFVPE PTYNA+VGAYCWSER D + + EM+K GV P+
Sbjct: 223 LGAEKRLSEALEFFELSKASGFVPEAPTYNAVVGAYCWSERMDDVQRTIDEMRKGGVGPS 282
Query: 466 SRTYEIIIHHLIKNRRTKDAYRVFQEMESKFGCEPSANTYEIIVRMFCSEERVDMALQVW 287
+RTY+II+HHLI+ +TK AY VFQ+M + GC+PS +TYEIIVRMFC+E+RVDMA++VW
Sbjct: 283 ARTYDIILHHLIRAGKTKIAYSVFQKMSCE-GCQPSVSTYEIIVRMFCNEDRVDMAIKVW 341
Query: 286 KQMKAKGILPSMHMFSSLINGLSRDNKLDEACAYFQEMLDSGIRPPGPLFGNXXXXXXXX 107
QMKAKGILP MHMFS+LIN L ++KLDEAC YFQEMLD GIRPP LF N
Sbjct: 342 DQMKAKGILPVMHMFSTLINSLCHESKLDEACMYFQEMLDVGIRPPAQLFSNLKQNLLDE 401
Query: 106 XXXXXXLSFGLKLDKIRKTRLV 41
+ F KLDK+RK LV
Sbjct: 402 GKKDTVVVFERKLDKLRKAPLV 423
Score = 90.1 bits (222), Expect = 3e-16
Identities = 49/166 (29%), Positives = 86/166 (51%)
Frame = -1
Query: 634 KRLNEAIDFFEQSKISGFVPELPTYNALVGAYCWSERFKDACKVLKEMKKSGVLPNSRTY 455
+++ EA+D F + + G E N L+ C S + + A V +M K G + + ++Y
Sbjct: 87 RKVKEAVDAFMKMEKFGLKIESSDVNRLLDTLCKSRQVERAQLVFDKMNKRGFVADIKSY 146
Query: 454 EIIIHHLIKNRRTKDAYRVFQEMESKFGCEPSANTYEIIVRMFCSEERVDMALQVWKQMK 275
I++ + + V+ EM+ + G EP TY I++ C R D A++++ +M+
Sbjct: 147 TILLEGWGQEKNLSRLMEVYNEMKDE-GFEPDVVTYGILINAHCKSRRYDDAIELFHEME 205
Query: 274 AKGILPSMHMFSSLINGLSRDNKLDEACAYFQEMLDSGIRPPGPLF 137
AK PS H++ +LINGL + +L EA +F+ SG P P +
Sbjct: 206 AKNCKPSPHIYCTLINGLGAEKRLSEALEFFELSKASGFVPEAPTY 251
Score = 66.6 bits (161), Expect = 4e-09
Identities = 41/163 (25%), Positives = 79/163 (48%), Gaps = 1/163 (0%)
Frame = -1
Query: 619 AIDFFEQS-KISGFVPELPTYNALVGAYCWSERFKDACKVLKEMKKSGVLPNSRTYEIII 443
A+ FF + K GF +Y+AL+ + ++F ++ +MK+ G+L N T+ +I
Sbjct: 22 ALSFFRWAEKQKGFQYSTESYHALIESLGKIKQFNVIWNLVTDMKQKGLL-NKETFALIS 80
Query: 442 HHLIKNRRTKDAYRVFQEMESKFGCEPSANTYEIIVRMFCSEERVDMALQVWKQMKAKGI 263
+ R+ K+A F +ME KFG + ++ ++ C +V+ A V+ +M +G
Sbjct: 81 RRYARARKVKEAVDAFMKME-KFGLKIESSDVNRLLDTLCKSRQVERAQLVFDKMNKRGF 139
Query: 262 LPSMHMFSSLINGLSRDNKLDEACAYFQEMLDSGIRPPGPLFG 134
+ + ++ L+ G ++ L + EM D G P +G
Sbjct: 140 VADIKSYTILLEGWGQEKNLSRLMEVYNEMKDEGFEPDVVTYG 182
>ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71060, mitochondrial-like [Cucumis sativus]
Length = 542
Score = 253 bits (646), Expect = 2e-65
Identities = 118/202 (58%), Positives = 153/202 (75%)
Frame = -1
Query: 646 LGAEKRLNEAIDFFEQSKISGFVPELPTYNALVGAYCWSERFKDACKVLKEMKKSGVLPN 467
LG+EKRL EA++FFEQ K+SGF PE PTYNA+VGAYCWS + A +++ EM+KSGV PN
Sbjct: 340 LGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPN 399
Query: 466 SRTYEIIIHHLIKNRRTKDAYRVFQEMESKFGCEPSANTYEIIVRMFCSEERVDMALQVW 287
SRTY+II+HHLIK R++K+AY VFQ M + GCEP+ +TY+I++RMFC+EERVDMA+Q+W
Sbjct: 400 SRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIW 459
Query: 286 KQMKAKGILPSMHMFSSLINGLSRDNKLDEACAYFQEMLDSGIRPPGPLFGNXXXXXXXX 107
+MKAKG+LP MH+FS+LIN L ++KL++AC YFQEMLD GIRPP +F N
Sbjct: 460 DEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDD 519
Query: 106 XXXXXXLSFGLKLDKIRKTRLV 41
L K+ K+RK LV
Sbjct: 520 GRKDTALLMAEKIXKLRKAPLV 541
Score = 97.4 bits (241), Expect = 2e-18
Identities = 50/166 (30%), Positives = 92/166 (55%)
Frame = -1
Query: 634 KRLNEAIDFFEQSKISGFVPELPTYNALVGAYCWSERFKDACKVLKEMKKSGVLPNSRTY 455
+++ EA++ FE+ + GF + +N L+ C S K A +V +MK P+ ++Y
Sbjct: 204 RKVKEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSY 263
Query: 454 EIIIHHLIKNRRTKDAYRVFQEMESKFGCEPSANTYEIIVRMFCSEERVDMALQVWKQMK 275
I++ +++ V++EM + G EP T+ I++ C + D A++++ +M+
Sbjct: 264 TILLEGWGQDQNLLKLNEVYREMRDE-GFEPDVVTFGILINAHCKARKYDEAIRLFHEME 322
Query: 274 AKGILPSMHMFSSLINGLSRDNKLDEACAYFQEMLDSGIRPPGPLF 137
AK I PS H+F +LINGL + +L EA +F+++ SG P P +
Sbjct: 323 AKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTY 368
Score = 76.6 bits (187), Expect = 4e-12
Identities = 37/157 (23%), Positives = 83/157 (52%)
Frame = -1
Query: 643 GAEKRLNEAIDFFEQSKISGFVPELPTYNALVGAYCWSERFKDACKVLKEMKKSGVLPNS 464
G ++ L + + + + + GF P++ T+ L+ A+C + ++ +A ++ EM+ + P+
Sbjct: 271 GQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSP 330
Query: 463 RTYEIIIHHLIKNRRTKDAYRVFQEMESKFGCEPSANTYEIIVRMFCSEERVDMALQVWK 284
+ +I+ L +R K+A F++++ G P A TY +V +C ++ A ++
Sbjct: 331 HVFCTLINGLGSEKRLKEALEFFEQLKLS-GFAPEAPTYNAVVGAYCWSMKMAYAYRMVD 389
Query: 283 QMKAKGILPSMHMFSSLINGLSRDNKLDEACAYFQEM 173
+M+ G+ P+ + +++ L + K EA + FQ M
Sbjct: 390 EMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRM 426
Score = 72.4 bits (176), Expect = 7e-11
Identities = 42/161 (26%), Positives = 83/161 (51%)
Frame = -1
Query: 634 KRLNEAIDFFEQSKISGFVPELPTYNALVGAYCWSERFKDACKVLKEMKKSGVLPNSRTY 455
+ + +A + F++ K F P++ +Y L+ + + +V +EM+ G P+ T+
Sbjct: 239 RNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTF 298
Query: 454 EIIIHHLIKNRRTKDAYRVFQEMESKFGCEPSANTYEIIVRMFCSEERVDMALQVWKQMK 275
I+I+ K R+ +A R+F EME+K +PS + + ++ SE+R+ AL+ ++Q+K
Sbjct: 299 GILINAHCKARKYDEAIRLFHEMEAK-NIKPSPHVFCTLINGLGSEKRLKEALEFFEQLK 357
Query: 274 AKGILPSMHMFSSLINGLSRDNKLDEACAYFQEMLDSGIRP 152
G P +++++ K+ A EM SG+ P
Sbjct: 358 LSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGP 398
Score = 69.7 bits (169), Expect = 4e-10
Identities = 44/163 (26%), Positives = 79/163 (48%), Gaps = 1/163 (0%)
Frame = -1
Query: 619 AIDFFEQS-KISGFVPELPTYNALVGAYCWSERFKDACKVLKEMKKSGVLPNSRTYEIII 443
A+ FF + K GF +YN L+ A ++F ++ +MK+ G+L + T+ +I
Sbjct: 139 ALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRKGIL-SRETFALIT 197
Query: 442 HHLIKNRRTKDAYRVFQEMESKFGCEPSANTYEIIVRMFCSEERVDMALQVWKQMKAKGI 263
+ R+ K+A F++ME KFG + + + ++ C V A +V+ +MK
Sbjct: 198 RRYARARKVKEAVESFEKME-KFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRF 256
Query: 262 LPSMHMFSSLINGLSRDNKLDEACAYFQEMLDSGIRPPGPLFG 134
P + ++ L+ G +D L + ++EM D G P FG
Sbjct: 257 KPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFG 299
>ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Cucumis sativus]
Length = 542
Score = 253 bits (646), Expect = 2e-65
Identities = 118/202 (58%), Positives = 153/202 (75%)
Frame = -1
Query: 646 LGAEKRLNEAIDFFEQSKISGFVPELPTYNALVGAYCWSERFKDACKVLKEMKKSGVLPN 467
LG+EKRL EA++FFEQ K+SGF PE PTYNA+VGAYCWS + A +++ EM+KSGV PN
Sbjct: 340 LGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPN 399
Query: 466 SRTYEIIIHHLIKNRRTKDAYRVFQEMESKFGCEPSANTYEIIVRMFCSEERVDMALQVW 287
SRTY+II+HHLIK R++K+AY VFQ M + GCEP+ +TY+I++RMFC+EERVDMA+Q+W
Sbjct: 400 SRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIW 459
Query: 286 KQMKAKGILPSMHMFSSLINGLSRDNKLDEACAYFQEMLDSGIRPPGPLFGNXXXXXXXX 107
+MKAKG+LP MH+FS+LIN L ++KL++AC YFQEMLD GIRPP +F N
Sbjct: 460 DEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDD 519
Query: 106 XXXXXXLSFGLKLDKIRKTRLV 41
L K+ K+RK LV
Sbjct: 520 GRKDTALLMAEKIKKLRKAPLV 541
Score = 97.4 bits (241), Expect = 2e-18
Identities = 50/166 (30%), Positives = 92/166 (55%)
Frame = -1
Query: 634 KRLNEAIDFFEQSKISGFVPELPTYNALVGAYCWSERFKDACKVLKEMKKSGVLPNSRTY 455
+++ EA++ FE+ + GF + +N L+ C S K A +V +MK P+ ++Y
Sbjct: 204 RKVKEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSY 263
Query: 454 EIIIHHLIKNRRTKDAYRVFQEMESKFGCEPSANTYEIIVRMFCSEERVDMALQVWKQMK 275
I++ +++ V++EM + G EP T+ I++ C + D A++++ +M+
Sbjct: 264 TILLEGWGQDQNLLKLNEVYREMRDE-GFEPDVVTFGILINAHCKARKYDEAIRLFHEME 322
Query: 274 AKGILPSMHMFSSLINGLSRDNKLDEACAYFQEMLDSGIRPPGPLF 137
AK I PS H+F +LINGL + +L EA +F+++ SG P P +
Sbjct: 323 AKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTY 368
Score = 76.6 bits (187), Expect = 4e-12
Identities = 37/157 (23%), Positives = 83/157 (52%)
Frame = -1
Query: 643 GAEKRLNEAIDFFEQSKISGFVPELPTYNALVGAYCWSERFKDACKVLKEMKKSGVLPNS 464
G ++ L + + + + + GF P++ T+ L+ A+C + ++ +A ++ EM+ + P+
Sbjct: 271 GQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSP 330
Query: 463 RTYEIIIHHLIKNRRTKDAYRVFQEMESKFGCEPSANTYEIIVRMFCSEERVDMALQVWK 284
+ +I+ L +R K+A F++++ G P A TY +V +C ++ A ++
Sbjct: 331 HVFCTLINGLGSEKRLKEALEFFEQLKLS-GFAPEAPTYNAVVGAYCWSMKMAYAYRMVD 389
Query: 283 QMKAKGILPSMHMFSSLINGLSRDNKLDEACAYFQEM 173
+M+ G+ P+ + +++ L + K EA + FQ M
Sbjct: 390 EMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRM 426
Score = 72.4 bits (176), Expect = 7e-11
Identities = 42/161 (26%), Positives = 83/161 (51%)
Frame = -1
Query: 634 KRLNEAIDFFEQSKISGFVPELPTYNALVGAYCWSERFKDACKVLKEMKKSGVLPNSRTY 455
+ + +A + F++ K F P++ +Y L+ + + +V +EM+ G P+ T+
Sbjct: 239 RNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTF 298
Query: 454 EIIIHHLIKNRRTKDAYRVFQEMESKFGCEPSANTYEIIVRMFCSEERVDMALQVWKQMK 275
I+I+ K R+ +A R+F EME+K +PS + + ++ SE+R+ AL+ ++Q+K
Sbjct: 299 GILINAHCKARKYDEAIRLFHEMEAK-NIKPSPHVFCTLINGLGSEKRLKEALEFFEQLK 357
Query: 274 AKGILPSMHMFSSLINGLSRDNKLDEACAYFQEMLDSGIRP 152
G P +++++ K+ A EM SG+ P
Sbjct: 358 LSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGP 398
Score = 69.7 bits (169), Expect = 4e-10
Identities = 44/163 (26%), Positives = 79/163 (48%), Gaps = 1/163 (0%)
Frame = -1
Query: 619 AIDFFEQS-KISGFVPELPTYNALVGAYCWSERFKDACKVLKEMKKSGVLPNSRTYEIII 443
A+ FF + K GF +YN L+ A ++F ++ +MK+ G+L + T+ +I
Sbjct: 139 ALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRKGIL-SRETFALIT 197
Query: 442 HHLIKNRRTKDAYRVFQEMESKFGCEPSANTYEIIVRMFCSEERVDMALQVWKQMKAKGI 263
+ R+ K+A F++ME KFG + + + ++ C V A +V+ +MK
Sbjct: 198 RRYARARKVKEAVESFEKME-KFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRF 256
Query: 262 LPSMHMFSSLINGLSRDNKLDEACAYFQEMLDSGIRPPGPLFG 134
P + ++ L+ G +D L + ++EM D G P FG
Sbjct: 257 KPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFG 299
>ref|XP_002888819.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297334660|gb|EFH65078.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 512
Score = 249 bits (637), Expect = 2e-64
Identities = 116/202 (57%), Positives = 152/202 (75%)
Frame = -1
Query: 646 LGAEKRLNEAIDFFEQSKISGFVPELPTYNALVGAYCWSERFKDACKVLKEMKKSGVLPN 467
LG+EK+LN+A++FFE+SK SGF E PTYNALVGAYCWS+R +DA K + EM+ G+ PN
Sbjct: 314 LGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAFKTVDEMRSKGIGPN 373
Query: 466 SRTYEIIIHHLIKNRRTKDAYRVFQEMESKFGCEPSANTYEIIVRMFCSEERVDMALQVW 287
+RTY+II+HHLI+ +RTK+AY V+Q+M CEP+ +TYEI+VRMFC++ER+DMA+++W
Sbjct: 374 ARTYDIILHHLIRMQRTKEAYEVYQKMS----CEPTVSTYEIMVRMFCNKERLDMAIKIW 429
Query: 286 KQMKAKGILPSMHMFSSLINGLSRDNKLDEACAYFQEMLDSGIRPPGPLFGNXXXXXXXX 107
+MK KG+LP MHMFSSLI L +NKLDEAC YF EMLD GIRPPG LF
Sbjct: 430 DEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHLFSRLKQTLLDE 489
Query: 106 XXXXXXLSFGLKLDKIRKTRLV 41
+K+D++RKT+LV
Sbjct: 490 GRKDKVADLAVKMDRLRKTQLV 511
Score = 86.3 bits (212), Expect = 5e-15
Identities = 49/166 (29%), Positives = 84/166 (50%)
Frame = -1
Query: 634 KRLNEAIDFFEQSKISGFVPELPTYNALVGAYCWSERFKDACKVLKEMKKSGVLPNSRTY 455
+++ EAI F + + GF E +N ++ S DA KV +MKK P+ ++Y
Sbjct: 178 RKVKEAITAFHKMEDYGFKMESSDFNRMLDILSKSRNVGDAQKVFDKMKKKRFEPDIKSY 237
Query: 454 EIIIHHLIKNRRTKDAYRVFQEMESKFGCEPSANTYEIIVRMFCSEERVDMALQVWKQMK 275
I++ + V+ EM+ + G EP Y II+ +C ++ D A++ + +M+
Sbjct: 238 TILLEGWGQELNLLRVNEVYGEMKDE-GFEPDVVAYGIIINAYCKAKKYDEAVRFFNEME 296
Query: 274 AKGILPSMHMFSSLINGLSRDNKLDEACAYFQEMLDSGIRPPGPLF 137
+ PS H+F SLINGL + KL++A +F+ SG P +
Sbjct: 297 QRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTY 342
Score = 66.6 bits (161), Expect = 4e-09
Identities = 41/165 (24%), Positives = 80/165 (48%)
Frame = -1
Query: 646 LGAEKRLNEAIDFFEQSKISGFVPELPTYNALVGAYCWSERFKDACKVLKEMKKSGVLPN 467
L + + +A F++ K F P++ +Y L+ + +V EMK G P+
Sbjct: 209 LSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVNEVYGEMKDEGFEPD 268
Query: 466 SRTYEIIIHHLIKNRRTKDAYRVFQEMESKFGCEPSANTYEIIVRMFCSEERVDMALQVW 287
Y III+ K ++ +A R F EME + C+PS + + ++ SE++++ AL+ +
Sbjct: 269 VVAYGIIINAYCKAKKYDEAVRFFNEMEQR-NCKPSPHIFCSLINGLGSEKKLNDALEFF 327
Query: 286 KQMKAKGILPSMHMFSSLINGLSRDNKLDEACAYFQEMLDSGIRP 152
++ K+ G +++L+ ++++A EM GI P
Sbjct: 328 ERSKSSGFPLEAPTYNALVGAYCWSQRMEDAFKTVDEMRSKGIGP 372