BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016636
         (1582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17870.3| unnamed protein product [Vitis vinifera]              369   e-100
ref|XP_002267344.1| PREDICTED: RING-H2 finger protein ATL43-like...   369   e-100
ref|XP_002511366.1| ring finger protein, putative [Ricinus commu...   355   2e-95
ref|NP_196200.2| RING-H2 finger protein ATL43 [Arabidopsis thali...   310   9e-82
sp|Q5EAE9.2|ATL43_ARATH RecName: Full=RING-H2 finger protein ATL...   310   9e-82

>emb|CBI17870.3| unnamed protein product [Vitis vinifera]
          Length = 457

 Score =  369 bits (948), Expect = e-100
 Identities = 210/339 (61%), Positives = 246/339 (72%), Gaps = 10/339 (2%)
 Frame = +3

Query: 351  TPFRPSIAVIVAVLTTMFSITFLLLLYAKHCKRGNG--YHGNTNANGLTTSTAQRNSGID 524
            +PFRPSIAVIV VLTTMFSITFLLLLYAKHCKRGNG  Y G    +    S A++NSGID
Sbjct: 50   SPFRPSIAVIVGVLTTMFSITFLLLLYAKHCKRGNGVVYTGTPPLS----SAARKNSGID 105

Query: 525  RSVIETLPIFRFSSLRGQKDGLECSVCLNRFESNEVLRLLPKCKHAFHVECVDTWLDAHS 704
            R+VIE+LP+FRF+SLRGQKDGLEC+VCLNRFE  E+LRLLPKCKHAFHVECVDTWLDAHS
Sbjct: 106  RTVIESLPVFRFASLRGQKDGLECAVCLNRFEPTEILRLLPKCKHAFHVECVDTWLDAHS 165

Query: 705  TCPLCRYRVDPEDVLLVEEIKLGVEERTSVTELEKNRESAE----FTRRISGRHSSAGER 872
            TCPLCRYRVDPED+LLVEE K+ V         E  +  AE      RR+SGRHSSAGER
Sbjct: 166  TCPLCRYRVDPEDILLVEEPKISVAPPPEPDPPEVEKPDAEPRNPEVRRVSGRHSSAGER 225

Query: 873  TSNFHFLQILIEKPSESTQYIRRSVD--SAISRKRSESVTVGCFERGARKDGLLLSESDR 1046
             S    +QI++ KP E+T   RRS+D  S+ SRKR+E V VGCF+R  RKD LLL+  DR
Sbjct: 226  RSG--LVQIVLHKPDETTS-SRRSLDSSSSSSRKRNEPVAVGCFDR-PRKDELLLTSEDR 281

Query: 1047 ENFLKRFEHKIILS--NQSGSHNRWSDLRPSDLLYLQSEMIISNNGRYSLSSNQHTRVAE 1220
             +F +R +H+II+S     G H RWSD++PSDLLYL+SEMIIS+N R  LSS   T    
Sbjct: 282  NSFERRLDHRIIVSAAGSGGFHQRWSDVQPSDLLYLRSEMIISDNRR--LSSCHGTIEG- 338

Query: 1221 FEEDKSGRDVINARSVSEITGLNRFSHKTEVYTENSEQR 1337
                 SGR VIN+RSVSEITGL+R          + +QR
Sbjct: 339  --GSWSGRSVINSRSVSEITGLSRLGSNYHHLDRHHQQR 375


>ref|XP_002267344.1| PREDICTED: RING-H2 finger protein ATL43-like [Vitis vinifera]
          Length = 404

 Score =  369 bits (948), Expect = e-100
 Identities = 210/339 (61%), Positives = 246/339 (72%), Gaps = 10/339 (2%)
 Frame = +3

Query: 351  TPFRPSIAVIVAVLTTMFSITFLLLLYAKHCKRGNG--YHGNTNANGLTTSTAQRNSGID 524
            +PFRPSIAVIV VLTTMFSITFLLLLYAKHCKRGNG  Y G    +    S A++NSGID
Sbjct: 50   SPFRPSIAVIVGVLTTMFSITFLLLLYAKHCKRGNGVVYTGTPPLS----SAARKNSGID 105

Query: 525  RSVIETLPIFRFSSLRGQKDGLECSVCLNRFESNEVLRLLPKCKHAFHVECVDTWLDAHS 704
            R+VIE+LP+FRF+SLRGQKDGLEC+VCLNRFE  E+LRLLPKCKHAFHVECVDTWLDAHS
Sbjct: 106  RTVIESLPVFRFASLRGQKDGLECAVCLNRFEPTEILRLLPKCKHAFHVECVDTWLDAHS 165

Query: 705  TCPLCRYRVDPEDVLLVEEIKLGVEERTSVTELEKNRESAE----FTRRISGRHSSAGER 872
            TCPLCRYRVDPED+LLVEE K+ V         E  +  AE      RR+SGRHSSAGER
Sbjct: 166  TCPLCRYRVDPEDILLVEEPKISVAPPPEPDPPEVEKPDAEPRNPEVRRVSGRHSSAGER 225

Query: 873  TSNFHFLQILIEKPSESTQYIRRSVD--SAISRKRSESVTVGCFERGARKDGLLLSESDR 1046
             S    +QI++ KP E+T   RRS+D  S+ SRKR+E V VGCF+R  RKD LLL+  DR
Sbjct: 226  RSG--LVQIVLHKPDETTS-SRRSLDSSSSSSRKRNEPVAVGCFDR-PRKDELLLTSEDR 281

Query: 1047 ENFLKRFEHKIILS--NQSGSHNRWSDLRPSDLLYLQSEMIISNNGRYSLSSNQHTRVAE 1220
             +F +R +H+II+S     G H RWSD++PSDLLYL+SEMIIS+N R  LSS   T    
Sbjct: 282  NSFERRLDHRIIVSAAGSGGFHQRWSDVQPSDLLYLRSEMIISDNRR--LSSCHGTIEG- 338

Query: 1221 FEEDKSGRDVINARSVSEITGLNRFSHKTEVYTENSEQR 1337
                 SGR VIN+RSVSEITGL+R          + +QR
Sbjct: 339  --GSWSGRSVINSRSVSEITGLSRLGSNYHHLDRHHQQR 375


>ref|XP_002511366.1| ring finger protein, putative [Ricinus communis]
            gi|223550481|gb|EEF51968.1| ring finger protein, putative
            [Ricinus communis]
          Length = 493

 Score =  355 bits (911), Expect = 2e-95
 Identities = 222/457 (48%), Positives = 276/457 (60%), Gaps = 66/457 (14%)
 Frame = +3

Query: 165  FSVFRPWVTLFFIWGLCFEPLMAEREEK-TPPP-----QSLRXXXXXXXXXXXXXXXXXX 326
            FS F  +  L F + L F+PL A+ + + TPPP     Q                     
Sbjct: 8    FSFF--FFILLFSFSL-FQPLFADVDSRITPPPDAAATQQQMIRTTSLSNHLAAPPPLLL 64

Query: 327  XTYKPALATPFRPSIAVIVAVLTTMFSITFLLLLYAKHCKRGNGYHGNTNANGLT---TS 497
              Y  + A PF+PSIAVIV VLTTMFSIT LLLLYAKHCKR + Y+   N  G T   T+
Sbjct: 65   PNYMNSSAPPFKPSIAVIVGVLTTMFSITLLLLLYAKHCKRAHIYNSFNNGGGGTGGQTA 124

Query: 498  TAQRNSGIDRSVIETLPIFRFSSLRGQKDGLECSVCLNRFESNEVLRLLPKCKHAFHVEC 677
             A++NSGIDR+VIE+LPIFRFSSLRGQKDGLEC+VCL RFE  EVLRLLPKCKHAFHVEC
Sbjct: 125  EARKNSGIDRAVIESLPIFRFSSLRGQKDGLECAVCLTRFEPPEVLRLLPKCKHAFHVEC 184

Query: 678  VDTWLDAHSTCPLCRYRVDPEDVLLVEEIKLGVEERTSVTELEKNRESAEF---TRRISG 848
            VDTWLDAHSTCPLCRYRVDPEDVLL+++ K      T+++     ++S E     RRISG
Sbjct: 185  VDTWLDAHSTCPLCRYRVDPEDVLLIDQDK-DPATTTNISLPPPQQQSTEIHGGGRRISG 243

Query: 849  RHSSAGERTSNFHFLQILIEKPS---ESTQYIRRSVDSAISRK-------RSESVTVGCF 998
            RHSSAGE+ S F   QI++++PS   ++T + RRS+DS   +K       R+ESV VGCF
Sbjct: 244  RHSSAGEKASGFALSQIVVQRPSATEQTTWFARRSLDSFSMKKNKNNHITRNESVAVGCF 303

Query: 999  ER---GARKDGLLL--------SESDRENF---------------------LKRFEHKII 1082
            +R     RKDGLLL         +SD ++                        RFEH+II
Sbjct: 304  DRYQSHQRKDGLLLLTNNSNGDGDSDGDDHSLESRRTSTASVNAGAGAGVDKTRFEHRII 363

Query: 1083 LSNQSGSHNRWSDLRPSDLLYLQSEMIISNNGRYSLSSNQHTRVAEFEE----------- 1229
            +S  + S  RWSD+ PSDLLYL+SEMI+S+N R+S++S     V   +            
Sbjct: 364  VSG-NASDERWSDVHPSDLLYLRSEMILSDNRRFSMTSGSRPSVGRRQHHQKQQNAVVKG 422

Query: 1230 -DKSGRDVINARSVSEITGLNRFSHKTEVYTENSEQR 1337
                GR VIN RSVSEITGLNRFS +    + +  +R
Sbjct: 423  PSSDGRSVINGRSVSEITGLNRFSDRESNNSRHHRER 459


>ref|NP_196200.2| RING-H2 finger protein ATL43 [Arabidopsis thaliana]
            gi|58743300|gb|AAW81728.1| At5g05810 [Arabidopsis
            thaliana] gi|61656157|gb|AAX49381.1| At5g05810
            [Arabidopsis thaliana] gi|332003545|gb|AED90928.1|
            RING-H2 finger protein ATL43 [Arabidopsis thaliana]
          Length = 353

 Score =  310 bits (793), Expect = 9e-82
 Identities = 176/334 (52%), Positives = 216/334 (64%), Gaps = 24/334 (7%)
 Frame = +3

Query: 363  PSIAVIVAVLTTMFSITFLLLLYAKHCKRGNGY-------------HGNTNANGLTTSTA 503
            P IAV++AVLT  FS+TFLLLLY KHCKR NG              +G    NG      
Sbjct: 2    PGIAVVIAVLTAFFSLTFLLLLYVKHCKRRNGSVYVNHPQRFAITRYGGGYYNGGGVVGG 61

Query: 504  QRNSGIDRSVIETLPIFRFSSLRGQKDGLECSVCLNRFESNEVLRLLPKCKHAFHVECVD 683
            ++NSGIDRSVIE+LP+FRF +L G KDGLEC+VCL RFE  EVLRLLPKCKHAFHVECVD
Sbjct: 62   RKNSGIDRSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVD 121

Query: 684  TWLDAHSTCPLCRYRVDPEDVLLVEEIKLGVEERTSVTELEK-NRESAEFTR-----RIS 845
            TWLDAHSTCPLCRYRVDPED+LL+ +     E + S  E    N      TR     RIS
Sbjct: 122  TWLDAHSTCPLCRYRVDPEDILLIGDCNSWFELQFSKDESNSVNNNPPGLTRFIPVSRIS 181

Query: 846  GRHSSAGERTSNFHFLQILIEKPSESTQYIRRSVDSAI-----SRKRSESVTVGCFERGA 1010
            GRHSSAGER S  + ++      S    + RRS+DS++       ++SESV V C +R  
Sbjct: 182  GRHSSAGERASRLNEIRTSSSYKSNPMSF-RRSLDSSLKVNDAGEEKSESVAVNCLDRLQ 240

Query: 1011 RKDGLLLSESDRENFLKRFEHKIILSNQSGSHNRWSDLRPSDLLYLQSEMIISNNGRYSL 1190
            RKDGLLL   +RE+F  RFEH+II+S  +    RWS++RPSDLLYL+SEMI+S+  + + 
Sbjct: 241  RKDGLLLI-PNRESFEGRFEHRIIISGGNRDDQRWSEVRPSDLLYLRSEMILSDCRKLAA 299

Query: 1191 SSNQHTRVAEFEEDKSGRDVINARSVSEITGLNR 1292
            +             + GRDVIN RSVSE+TG+ R
Sbjct: 300  A-------------EGGRDVINGRSVSELTGIER 320


>sp|Q5EAE9.2|ATL43_ARATH RecName: Full=RING-H2 finger protein ATL43; Flags: Precursor
            gi|9759106|dbj|BAB09675.1| unnamed protein product
            [Arabidopsis thaliana]
          Length = 407

 Score =  310 bits (793), Expect = 9e-82
 Identities = 176/334 (52%), Positives = 216/334 (64%), Gaps = 24/334 (7%)
 Frame = +3

Query: 363  PSIAVIVAVLTTMFSITFLLLLYAKHCKRGNGY-------------HGNTNANGLTTSTA 503
            P IAV++AVLT  FS+TFLLLLY KHCKR NG              +G    NG      
Sbjct: 56   PGIAVVIAVLTAFFSLTFLLLLYVKHCKRRNGSVYVNHPQRFAITRYGGGYYNGGGVVGG 115

Query: 504  QRNSGIDRSVIETLPIFRFSSLRGQKDGLECSVCLNRFESNEVLRLLPKCKHAFHVECVD 683
            ++NSGIDRSVIE+LP+FRF +L G KDGLEC+VCL RFE  EVLRLLPKCKHAFHVECVD
Sbjct: 116  RKNSGIDRSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVD 175

Query: 684  TWLDAHSTCPLCRYRVDPEDVLLVEEIKLGVEERTSVTELEK-NRESAEFTR-----RIS 845
            TWLDAHSTCPLCRYRVDPED+LL+ +     E + S  E    N      TR     RIS
Sbjct: 176  TWLDAHSTCPLCRYRVDPEDILLIGDCNSWFELQFSKDESNSVNNNPPGLTRFIPVSRIS 235

Query: 846  GRHSSAGERTSNFHFLQILIEKPSESTQYIRRSVDSAI-----SRKRSESVTVGCFERGA 1010
            GRHSSAGER S  + ++      S    + RRS+DS++       ++SESV V C +R  
Sbjct: 236  GRHSSAGERASRLNEIRTSSSYKSNPMSF-RRSLDSSLKVNDAGEEKSESVAVNCLDRLQ 294

Query: 1011 RKDGLLLSESDRENFLKRFEHKIILSNQSGSHNRWSDLRPSDLLYLQSEMIISNNGRYSL 1190
            RKDGLLL   +RE+F  RFEH+II+S  +    RWS++RPSDLLYL+SEMI+S+  + + 
Sbjct: 295  RKDGLLLI-PNRESFEGRFEHRIIISGGNRDDQRWSEVRPSDLLYLRSEMILSDCRKLAA 353

Query: 1191 SSNQHTRVAEFEEDKSGRDVINARSVSEITGLNR 1292
            +             + GRDVIN RSVSE+TG+ R
Sbjct: 354  A-------------EGGRDVINGRSVSELTGIER 374