BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016625
         (881 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597926.1| Formamidopyrimidine-DNA glycosylase [Medicag...   114   2e-31
ref|XP_003542122.1| PREDICTED: formamidopyrimidine-DNA glycosyla...   116   6e-24
ref|XP_002263635.1| PREDICTED: formamidopyrimidine-DNA glycosyla...   116   8e-24
gb|AAC97952.1| putative formamidopyrimidine-DNA glycosylase 1 [A...   108   2e-21
pdb|3TWL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Fp...   108   2e-21

>ref|XP_003597926.1| Formamidopyrimidine-DNA glycosylase [Medicago truncatula]
           gi|355486974|gb|AES68177.1| Formamidopyrimidine-DNA
           glycosylase [Medicago truncatula]
          Length = 424

 Score =  114 bits (284), Expect(2) = 2e-31
 Identities = 62/110 (56%), Positives = 71/110 (64%), Gaps = 3/110 (2%)
 Frame = -1

Query: 587 SVEVGADSSQFPDNWIFHSRDKKPGKAFVDGKRIEFITAGGRTTAYVPELQKLPKDQGVK 408
           SVEVGADSSQ+P NWIFHSR+KKPGKAFVDGK IEFITAGGRTTAYVPELQKL   Q +K
Sbjct: 254 SVEVGADSSQYPTNWIFHSREKKPGKAFVDGKTIEFITAGGRTTAYVPELQKLSGSQVLK 313

Query: 407 NTS---GQPKRKSSNGDXXXXXXXXXENPKKNKFNNQGKTRAKANTSTAK 267
            T    G+  +KSS  D             K+K   +   +AK  +   K
Sbjct: 314 ETGKLRGKASKKSSVDDDNNDGADENLESLKSKKGTKAGAKAKKPSKRKK 363



 Score = 48.9 bits (115), Expect(2) = 2e-31
 Identities = 16/25 (64%), Positives = 23/25 (92%)
 Frame = -2

Query: 721 CSRFPIEWMFHYRWGKKSGKVNGKI 647
           CSRFP+EW+FH+RWGKK GK++ ++
Sbjct: 233 CSRFPLEWLFHFRWGKKPGKISVEV 257


>ref|XP_003542122.1| PREDICTED: formamidopyrimidine-DNA glycosylase-like [Glycine max]
          Length = 399

 Score =  116 bits (291), Expect = 6e-24
 Identities = 62/115 (53%), Positives = 78/115 (67%), Gaps = 1/115 (0%)
 Frame = -1

Query: 602 QVTEKSVEVGADSSQFPDNWIFHSRDKKPGKAFVDGKRIEFITAGGRTTAYVPELQKLPK 423
           +V EK++EVGA+SSQ+P NWIFHSR+KKPGKAFVDGK+I+FITAGGRTTAYVPELQKL  
Sbjct: 221 EVIEKAIEVGAESSQYPTNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLSG 280

Query: 422 DQGVKNTSGQPKRKSSNGDXXXXXXXXXENPKKNKFNNQGKTRAKANTST-AKGK 261
              VK T    KR++S            E P   + ++ G  ++K  T   AKG+
Sbjct: 281 SLDVKETGKPNKRQASK---KVRVDDDTEKPTNGEVDDLGSVKSKKGTKAGAKGR 332


>ref|XP_002263635.1| PREDICTED: formamidopyrimidine-DNA glycosylase-like [Vitis
           vinifera]
          Length = 403

 Score =  116 bits (290), Expect = 8e-24
 Identities = 61/117 (52%), Positives = 73/117 (62%), Gaps = 4/117 (3%)
 Frame = -1

Query: 602 QVTEKSVEVGADSSQFPDNWIFHSRDKKPGKAFVDGKRIEFITAGGRTTAYVPELQKLPK 423
           QV EK++EVGADSSQFP NWIFHSR+KKPGKAFVDGK+I+FI+AGGRTTAYVPELQKL  
Sbjct: 221 QVIEKAMEVGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFISAGGRTTAYVPELQKLSG 280

Query: 422 DQ----GVKNTSGQPKRKSSNGDXXXXXXXXXENPKKNKFNNQGKTRAKANTSTAKG 264
            Q     VK     P RK    D         + P   +  N  + ++K   +   G
Sbjct: 281 TQAAKASVKPRKQTPMRKKEENDEDDDDDDALDEPASEEEKNTKRAKSKKGQNPKGG 337


>gb|AAC97952.1| putative formamidopyrimidine-DNA glycosylase 1 [Arabidopsis
           thaliana]
          Length = 390

 Score =  108 bits (270), Expect = 2e-21
 Identities = 55/84 (65%), Positives = 63/84 (75%), Gaps = 5/84 (5%)
 Frame = -1

Query: 602 QVTEKSVEVGADSSQFPDNWIFHSRDKKPGKAFVDGKRIEFITAGGRTTAYVPELQKLPK 423
           +V EK+VEV ADSSQFP NWIFH+R+KKPGKAFVDGK+I+FITAGGRTTAYVPELQKL  
Sbjct: 221 EVIEKAVEVDADSSQFPSNWIFHNREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLYG 280

Query: 422 DQGVKNTSGQP-----KRKSSNGD 366
               K    +P     K K  +GD
Sbjct: 281 KDAEKAAKVRPAKRGVKPKEDDGD 304


>pdb|3TWL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Fpg
           gi|400261074|pdb|3TWM|A Chain A, Crystal Structure Of
           Arabidopsis Thaliana Fpg gi|400261075|pdb|3TWM|B Chain
           B, Crystal Structure Of Arabidopsis Thaliana Fpg
          Length = 310

 Score =  108 bits (270), Expect = 2e-21
 Identities = 55/84 (65%), Positives = 63/84 (75%), Gaps = 5/84 (5%)
 Frame = -1

Query: 602 QVTEKSVEVGADSSQFPDNWIFHSRDKKPGKAFVDGKRIEFITAGGRTTAYVPELQKLPK 423
           +V EK+VEV ADSSQFP NWIFH+R+KKPGKAFVDGK+I+FITAGGRTTAYVPELQKL  
Sbjct: 221 EVIEKAVEVDADSSQFPSNWIFHNREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLYG 280

Query: 422 DQGVKNTSGQP-----KRKSSNGD 366
               K    +P     K K  +GD
Sbjct: 281 KDAEKAAKVRPAKRGVKPKEDDGD 304