BLASTX nr result

ID: Coptis23_contig00016615 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016615
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271953.1| PREDICTED: uncharacterized protein LOC100250...   147   7e-34
ref|XP_002317991.1| predicted protein [Populus trichocarpa] gi|2...   144   1e-32
ref|XP_003523041.1| PREDICTED: uncharacterized protein LOC100816...   137   7e-31
ref|XP_002511520.1| conserved hypothetical protein [Ricinus comm...   137   7e-31
gb|ABK96654.1| unknown [Populus trichocarpa x Populus deltoides]      137   1e-30

>ref|XP_002271953.1| PREDICTED: uncharacterized protein LOC100250168 [Vitis vinifera]
           gi|147802714|emb|CAN62049.1| hypothetical protein
           VITISV_012441 [Vitis vinifera]
           gi|297734028|emb|CBI15275.3| unnamed protein product
           [Vitis vinifera]
          Length = 193

 Score =  147 bits (372), Expect = 7e-34
 Identities = 78/108 (72%), Positives = 87/108 (80%)
 Frame = +2

Query: 140 PAKRCLTIVNMAXXXXXXXXXXXXXXQWYGAGIFVEGSEDISVDVFKKMEKKKVLSNVEK 319
           PAK+ L I+ MA              +W+GAGIFVEGSE++ VDVFK +EKKKVLSNVEK
Sbjct: 31  PAKKPLRILAMASKKKVNRYDENWKKEWFGAGIFVEGSEEVEVDVFKNLEKKKVLSNVEK 90

Query: 320 SGLLSKAEELGFTLSSIEKLGIFSKAEKFGLLSLLEKAASFSPAALAS 463
           SGLLSKAEELGFTLSSIEKLG+FSKAE  GLLSLLEKAASFSP+ALAS
Sbjct: 91  SGLLSKAEELGFTLSSIEKLGVFSKAEDLGLLSLLEKAASFSPSALAS 138


>ref|XP_002317991.1| predicted protein [Populus trichocarpa]
           gi|224144998|ref|XP_002336192.1| predicted protein
           [Populus trichocarpa] gi|222832261|gb|EEE70738.1|
           predicted protein [Populus trichocarpa]
           gi|222858664|gb|EEE96211.1| predicted protein [Populus
           trichocarpa]
          Length = 197

 Score =  144 bits (362), Expect = 1e-32
 Identities = 78/109 (71%), Positives = 86/109 (78%), Gaps = 1/109 (0%)
 Frame = +2

Query: 140 PAKR-CLTIVNMAXXXXXXXXXXXXXXQWYGAGIFVEGSEDISVDVFKKMEKKKVLSNVE 316
           PAK+  LTIV MA              QWYGAGIF EGSE+I  DVFKK+EK+KVLSNVE
Sbjct: 34  PAKQLALTIVAMAPKKKVNKFDESWKKQWYGAGIFFEGSEEIEFDVFKKLEKRKVLSNVE 93

Query: 317 KSGLLSKAEELGFTLSSIEKLGIFSKAEKFGLLSLLEKAASFSPAALAS 463
           K+GLLSKAEELGFTLSSIEKLG+FSKAE+ GLLSLLEK ASFSP+ LAS
Sbjct: 94  KAGLLSKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKTASFSPSTLAS 142


>ref|XP_003523041.1| PREDICTED: uncharacterized protein LOC100816458 [Glycine max]
          Length = 194

 Score =  137 bits (346), Expect = 7e-31
 Identities = 70/107 (65%), Positives = 86/107 (80%)
 Frame = +2

Query: 143 AKRCLTIVNMAXXXXXXXXXXXXXXQWYGAGIFVEGSEDISVDVFKKMEKKKVLSNVEKS 322
           A++ LT+  MA              +W+GAGIF EGSE++ VDVFKK+EK+KVLSNVEK+
Sbjct: 33  ARKPLTVFAMAPKKKVNKYNDKWKKEWFGAGIFYEGSEEVEVDVFKKIEKRKVLSNVEKA 92

Query: 323 GLLSKAEELGFTLSSIEKLGIFSKAEKFGLLSLLEKAASFSPAALAS 463
           GLLSKAE+LGFTLSSIEKLG+FSKAE+ GLLSLL++AASFSP+ LAS
Sbjct: 93  GLLSKAEDLGFTLSSIEKLGVFSKAEELGLLSLLDRAASFSPSLLAS 139


>ref|XP_002511520.1| conserved hypothetical protein [Ricinus communis]
           gi|223550635|gb|EEF52122.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 197

 Score =  137 bits (346), Expect = 7e-31
 Identities = 72/108 (66%), Positives = 84/108 (77%)
 Frame = +2

Query: 140 PAKRCLTIVNMAXXXXXXXXXXXXXXQWYGAGIFVEGSEDISVDVFKKMEKKKVLSNVEK 319
           PAK+ LTIV MA              +W+GAGIF E SE++ +DVFKK+EK+KVLSNVEK
Sbjct: 35  PAKQSLTIVAMAPQKKVNKYDDGWQKKWFGAGIFYESSEELEMDVFKKLEKRKVLSNVEK 94

Query: 320 SGLLSKAEELGFTLSSIEKLGIFSKAEKFGLLSLLEKAASFSPAALAS 463
           +GLLSKAEELG TLSSIEKLG+FSKAE+ GLLSLLEK AS SP+ LAS
Sbjct: 95  AGLLSKAEELGITLSSIEKLGVFSKAEELGLLSLLEKTASLSPSILAS 142


>gb|ABK96654.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 197

 Score =  137 bits (344), Expect = 1e-30
 Identities = 81/139 (58%), Positives = 94/139 (67%), Gaps = 7/139 (5%)
 Frame = +2

Query: 68  RKPLILSSMAVTASNISSFNTNII------PAKR-CLTIVNMAXXXXXXXXXXXXXXQWY 226
           R PLI S+  +  +N   F T+        P K+  LTIV MA              QWY
Sbjct: 4   RAPLITSAAYLRGTNGPHFLTSKSRFGLQSPTKQLALTIVAMAPQKKVNKYDGNWKKQWY 63

Query: 227 GAGIFVEGSEDISVDVFKKMEKKKVLSNVEKSGLLSKAEELGFTLSSIEKLGIFSKAEKF 406
           GAGIF E SE++  DVFKK+EK+KVLSNVEK+GLLSKAEELG TLSSIEKLG+FSKAE+ 
Sbjct: 64  GAGIFYEDSEEVEFDVFKKLEKRKVLSNVEKAGLLSKAEELGVTLSSIEKLGVFSKAEQL 123

Query: 407 GLLSLLEKAASFSPAALAS 463
           GLLSLLEK AS SP+ LAS
Sbjct: 124 GLLSLLEKTASVSPSTLAS 142


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