BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016612
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527490.1| conserved hypothetical protein [Ricinus comm...    72   4e-11
ref|XP_002521818.1| conserved hypothetical protein [Ricinus comm...    63   3e-08
ref|XP_002527491.1| conserved hypothetical protein [Ricinus comm...    50   2e-07

>ref|XP_002527490.1| conserved hypothetical protein [Ricinus communis]
           gi|223533130|gb|EEF34888.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 60

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 36/51 (70%), Positives = 37/51 (72%)
 Frame = +2

Query: 98  ARSKLRVGPCGLGEGLAYVVPRVEGTASVWFHRAAKTSRSRQWKDNESVAP 250
           ARSKLRV PCGLGEG   + PR EGTA  WFHRAA TS S QWKDN  V P
Sbjct: 5   ARSKLRVDPCGLGEGPGSMGPRAEGTALGWFHRAAITSLSWQWKDNGPVLP 55


>ref|XP_002521818.1| conserved hypothetical protein [Ricinus communis]
           gi|223539031|gb|EEF40628.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 78

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/47 (68%), Positives = 35/47 (74%)
 Frame = +3

Query: 96  LPVPS*ELALVD*AKAWPTWFLEWRVLRQSGFTEQRKPPALDSGRIT 236
           LP PS EL+ V  AK   T  LEWRVLR++GFTEQR PPALDSG IT
Sbjct: 11  LPAPSGELSFVVLAKVGTTLLLEWRVLREAGFTEQRSPPALDSGWIT 57


>ref|XP_002527491.1| conserved hypothetical protein [Ricinus communis]
           gi|223533131|gb|EEF34889.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 101

 Score = 50.4 bits (119), Expect(2) = 2e-07
 Identities = 31/63 (49%), Positives = 35/63 (55%)
 Frame = -3

Query: 253 LWSNRLVILPLSRAGGFRCSVKPD*RSTLHSRNHVGQAFA*STRANS*LGTGKSVCSNPQ 74
           L  ++LVILPL RAGG RCSVKP  R  L SRN V  AFA    A      G++     Q
Sbjct: 14  LGRHQLVILPLPRAGGCRCSVKPASRCALRSRNQVTPAFAQGHIAQLSAWNGRARAQPHQ 73

Query: 73  ARP 65
            RP
Sbjct: 74  GRP 76



 Score = 29.3 bits (64), Expect(2) = 2e-07
 Identities = 15/24 (62%), Positives = 17/24 (70%)
 Frame = -1

Query: 72  PDQKP*GPCSITLMPSLELQAHAT 1
           P+Q+P     ITLMP L LQAHAT
Sbjct: 79  PEQRP-----ITLMPLLRLQAHAT 97