BLASTX nr result

ID: Coptis23_contig00016605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016605
         (1126 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526458.1| conserved hypothetical protein [Ricinus comm...   198   2e-48
emb|CBI29711.3| unnamed protein product [Vitis vinifera]              196   9e-48
ref|XP_002328775.1| predicted protein [Populus trichocarpa] gi|2...   188   2e-45
ref|XP_002869724.1| hypothetical protein ARALYDRAFT_492419 [Arab...   186   7e-45
ref|XP_002331110.1| predicted protein [Populus trichocarpa] gi|2...   186   1e-44

>ref|XP_002526458.1| conserved hypothetical protein [Ricinus communis]
           gi|223534238|gb|EEF35953.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 230

 Score =  198 bits (503), Expect = 2e-48
 Identities = 105/184 (57%), Positives = 125/184 (67%), Gaps = 2/184 (1%)
 Frame = -2

Query: 801 SPSFPQRAIXXXXXXXXXXXXXLPTGTVLAFQLLLPTFTNNGSCTSGARXXXXXXXXXXX 622
           SPS  QRAI             LPTGT+LAFQLL P FTNNG+C S  R           
Sbjct: 46  SPSLSQRAISQTLTSTANLANLLPTGTLLAFQLLTPIFTNNGACDSVTRPMTLCLLALLA 105

Query: 621 XXXXXXXXTDSFKTQEG-QVYYGLVTFKGMWLFDYPGTVSS-LPDLSKYRIRLIDGVHAV 448
                   TDS K+ +G QVYYG+ TFKG++LFD P  V + L DLSKY+IR IDGVH+V
Sbjct: 106 ISCFLSSFTDSVKSSDGKQVYYGIATFKGIFLFDCPDPVGAGLKDLSKYKIRFIDGVHSV 165

Query: 447 LSVFIFVAIALRDANVLRCFYPNPEQETQDILSIAPVGISVICGLLFVVFPTRRHGIGYP 268
           LSV +F+A ALRD NV+ CFYP P+ ETQ++L+IAPVGI +IC LLFVVFPTRRHGIGYP
Sbjct: 166 LSVLVFIAFALRDKNVVSCFYPMPKHETQEVLNIAPVGIGLICSLLFVVFPTRRHGIGYP 225

Query: 267 CSSG 256
            ++G
Sbjct: 226 VTAG 229


>emb|CBI29711.3| unnamed protein product [Vitis vinifera]
          Length = 238

 Score =  196 bits (498), Expect = 9e-48
 Identities = 102/186 (54%), Positives = 122/186 (65%), Gaps = 7/186 (3%)
 Frame = -2

Query: 804 PSPSFP----QRAIXXXXXXXXXXXXXLPTGTVLAFQLLLPTFTNNGSCTSGARXXXXXX 637
           PS S P    QRA+             LPTGT+LAFQLL P FTNNG+C +  R      
Sbjct: 66  PSSSAPSTLRQRALSQTLASTANLANLLPTGTLLAFQLLTPVFTNNGACDAVTRFT---- 121

Query: 636 XXXXXXXXXXXXXTDSFKTQEGQVYYGLVTFKGMWLFDY---PGTVSSLPDLSKYRIRLI 466
                         DSFKT +G+V+YG+ TFKG+WLFDY    G+ +SLPDLSKY+ R I
Sbjct: 122 --------------DSFKTPDGRVFYGIATFKGLWLFDYVDESGSAASLPDLSKYKFRFI 167

Query: 465 DGVHAVLSVFIFVAIALRDANVLRCFYPNPEQETQDILSIAPVGISVICGLLFVVFPTRR 286
           DGVHAVLSV +FVA+A+RD NV+ CFYP P +E Q++L I PVGI +IC LLFVVFPT R
Sbjct: 168 DGVHAVLSVLVFVAVAMRDKNVVSCFYPQPAREVQEVLDIVPVGIGLICSLLFVVFPTTR 227

Query: 285 HGIGYP 268
           HGIGYP
Sbjct: 228 HGIGYP 233


>ref|XP_002328775.1| predicted protein [Populus trichocarpa] gi|222839073|gb|EEE77424.1|
           predicted protein [Populus trichocarpa]
          Length = 230

 Score =  188 bits (477), Expect = 2e-45
 Identities = 102/196 (52%), Positives = 127/196 (64%), Gaps = 4/196 (2%)
 Frame = -2

Query: 831 NVQIQTTTIPS--PSFPQRAIXXXXXXXXXXXXXLPTGTVLAFQLLLPTFTNNGSCTSGA 658
           NVQ +T   PS  P+  QRAI             LPTGT+LAFQLL P FTNNG+C S  
Sbjct: 34  NVQPETPKSPSRPPTLSQRAISQTLTSTANLANLLPTGTLLAFQLLTPFFTNNGACDSAT 93

Query: 657 RXXXXXXXXXXXXXXXXXXXTDSFKTQ-EGQVYYGLVTFKGMWLFDYPGTVSS-LPDLSK 484
           R                   TDS ++  +G+VYYGL +FKGM+LFD P   +S L DLSK
Sbjct: 94  RPMTLILLALLALSCFLASFTDSVRSPTDGRVYYGLASFKGMYLFDCPDPAASGLVDLSK 153

Query: 483 YRIRLIDGVHAVLSVFIFVAIALRDANVLRCFYPNPEQETQDILSIAPVGISVICGLLFV 304
           +++  ID VHAVLSV +F+++ALR+ NVL CFYP P+ ETQ++LSI P+G+ +IC LLFV
Sbjct: 154 FKMGFIDVVHAVLSVLVFISVALREKNVLSCFYPMPKHETQEVLSIVPIGVGLICSLLFV 213

Query: 303 VFPTRRHGIGYPCSSG 256
           VFPTRRHGIGYP   G
Sbjct: 214 VFPTRRHGIGYPVVQG 229


>ref|XP_002869724.1| hypothetical protein ARALYDRAFT_492419 [Arabidopsis lyrata subsp.
           lyrata] gi|297315560|gb|EFH45983.1| hypothetical protein
           ARALYDRAFT_492419 [Arabidopsis lyrata subsp. lyrata]
          Length = 213

 Score =  186 bits (473), Expect = 7e-45
 Identities = 91/156 (58%), Positives = 107/156 (68%), Gaps = 1/156 (0%)
 Frame = -2

Query: 732 PTGTVLAFQLLLPTFTNNGSCTSGARXXXXXXXXXXXXXXXXXXXTDSFKTQEGQVYYGL 553
           PTGT+LAF LL+P FT+NGSC    R                   TDS K ++G VYYG 
Sbjct: 50  PTGTLLAFTLLIPVFTSNGSCDYPTRVLTAGLLTLLSISCFLSSFTDSVKAEDGNVYYGF 109

Query: 552 VTFKGMWLFDYPGTVS-SLPDLSKYRIRLIDGVHAVLSVFIFVAIALRDANVLRCFYPNP 376
            T KGMW+FDYP      LPDLSKYRIR+ID +HAVLSV +F A+ALRD N + CFYP P
Sbjct: 110 ATRKGMWIFDYPDPDGLGLPDLSKYRIRIIDWIHAVLSVLVFGAVALRDKNAVSCFYPAP 169

Query: 375 EQETQDILSIAPVGISVICGLLFVVFPTRRHGIGYP 268
           EQET+ +L I P+G+ VICGLLF+VFP RRHGIGYP
Sbjct: 170 EQETKKVLDIVPMGVGVICGLLFLVFPARRHGIGYP 205


>ref|XP_002331110.1| predicted protein [Populus trichocarpa] gi|222872838|gb|EEF09969.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  186 bits (471), Expect = 1e-44
 Identities = 102/192 (53%), Positives = 121/192 (63%), Gaps = 4/192 (2%)
 Frame = -2

Query: 819 QTTTIPS--PSFPQRAIXXXXXXXXXXXXXLPTGTVLAFQLLLPTFTNNGSCTSGARXXX 646
           +T   PS  P+F QRAI             LPTGT+LAFQ+L P FTNNG+C S      
Sbjct: 41  ETPKSPSRPPTFSQRAISQTLTSTANLANLLPTGTLLAFQILTPIFTNNGACDSATAPMT 100

Query: 645 XXXXXXXXXXXXXXXXTDSFKTQ-EGQVYYGLVTFKGMWLFDYPGTVSS-LPDLSKYRIR 472
                           TDS K+  +GQVYYG  T KGM+LFD P  V S L DLSK ++R
Sbjct: 101 SVLLALLAVSCFLGSFTDSVKSPTDGQVYYGFATLKGMFLFDCPDPVGSGLSDLSKLKLR 160

Query: 471 LIDGVHAVLSVFIFVAIALRDANVLRCFYPNPEQETQDILSIAPVGISVICGLLFVVFPT 292
            ID VHAVLSV +FVA+ALRD NVL CFYP P+ ETQ++L + PVGI +IC LLF+ FPT
Sbjct: 161 FIDVVHAVLSVLVFVAVALRDKNVLSCFYPMPKHETQEVLDVIPVGIGLICSLLFMAFPT 220

Query: 291 RRHGIGYPCSSG 256
           RRHGIGYP + G
Sbjct: 221 RRHGIGYPVTPG 232


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