BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016600
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281501.1| PREDICTED: putative rRNA methyltransferase y...    74   9e-12
emb|CAN74970.1| hypothetical protein VITISV_001039 [Vitis vinifera]    74   9e-12
ref|XP_003543613.1| PREDICTED: putative rRNA methyltransferase y...    69   5e-10
gb|ACU20682.1| unknown [Glycine max]                                   69   5e-10
ref|XP_003618426.1| hypothetical protein MTR_6g009400 [Medicago ...    64   2e-08

>ref|XP_002281501.1| PREDICTED: putative rRNA methyltransferase ylbH [Vitis vinifera]
           gi|296087748|emb|CBI35004.3| unnamed protein product
           [Vitis vinifera]
          Length = 331

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 39/70 (55%), Positives = 44/70 (62%)
 Frame = +2

Query: 305 ERYGFDSKELLSQSSSXXXXXXXXXXXXXXTSVVPLEERKPPRTTHKLLQVLAGTARRKK 484
           ERYG+D+ E +S+ S                  V  E+ KPPRTTHKLLQVL G ARRKK
Sbjct: 64  ERYGYDANEFVSEPSPKTTRRRKELQKTGKGKQVSPEDPKPPRTTHKLLQVLGGKARRKK 123

Query: 485 LLSPKGMDVR 514
           LLSPKGMDVR
Sbjct: 124 LLSPKGMDVR 133


>emb|CAN74970.1| hypothetical protein VITISV_001039 [Vitis vinifera]
          Length = 408

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 39/70 (55%), Positives = 44/70 (62%)
 Frame = +2

Query: 305 ERYGFDSKELLSQSSSXXXXXXXXXXXXXXTSVVPLEERKPPRTTHKLLQVLAGTARRKK 484
           ERYG+D+ E +S+ S                  V  E+ KPPRTTHKLLQVL G ARRKK
Sbjct: 64  ERYGYDANEFVSEPSPKTTRRRKELQKTGKGKQVSPEDPKPPRTTHKLLQVLGGKARRKK 123

Query: 485 LLSPKGMDVR 514
           LLSPKGMDVR
Sbjct: 124 LLSPKGMDVR 133


>ref|XP_003543613.1| PREDICTED: putative rRNA methyltransferase ylbH-like [Glycine max]
          Length = 311

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 41/73 (56%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
 Frame = +2

Query: 305 ERYGFD--SKELLSQSSSXXXXXXXXXXXXXXTSVV-PLEERKPPRTTHKLLQVLAGTAR 475
           E+YG+D  + E  SQSSS                V  P E+ KPPR THKLLQVL GTAR
Sbjct: 61  EKYGYDIDADEYFSQSSSKSKRRKEQPRRRGGKQVQDPPEDPKPPRVTHKLLQVLGGTAR 120

Query: 476 RKKLLSPKGMDVR 514
           R KLLSPKGMDVR
Sbjct: 121 RVKLLSPKGMDVR 133


>gb|ACU20682.1| unknown [Glycine max]
          Length = 199

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 41/73 (56%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
 Frame = +2

Query: 305 ERYGFD--SKELLSQSSSXXXXXXXXXXXXXXTSVV-PLEERKPPRTTHKLLQVLAGTAR 475
           E+YG+D  + E  SQSSS                V  P E+ KPPR THKLLQVL GTAR
Sbjct: 61  EKYGYDIDADEYFSQSSSKSKRRKEQPRRRGGKQVQDPPEDPKPPRVTHKLLQVLGGTAR 120

Query: 476 RKKLLSPKGMDVR 514
           R KLLSPKGMDVR
Sbjct: 121 RVKLLSPKGMDVR 133


>ref|XP_003618426.1| hypothetical protein MTR_6g009400 [Medicago truncatula]
           gi|355493441|gb|AES74644.1| hypothetical protein
           MTR_6g009400 [Medicago truncatula]
          Length = 325

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 39/74 (52%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
 Frame = +2

Query: 305 ERYGFD--SKELLSQSSSXXXXXXXXXXXXXXTSVV--PLEERKPPRTTHKLLQVLAGTA 472
           ERYG+D  + +   QSSS                 V  P  E KPPRTTHKLLQV+ GTA
Sbjct: 67  ERYGYDVDADDYFPQSSSPKSKRKKEQQKTRGGKQVQDPPVEPKPPRTTHKLLQVIGGTA 126

Query: 473 RRKKLLSPKGMDVR 514
           RR KLLSPK MDVR
Sbjct: 127 RRTKLLSPKSMDVR 140