BLASTX nr result

ID: Coptis23_contig00016576 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016576
         (1446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269779.2| PREDICTED: putative disease resistance prote...   206   1e-50
ref|XP_002513078.1| leucine-rich repeat-containing protein, puta...   205   2e-50
ref|XP_002297751.1| cc-nbs-lrr resistance protein [Populus trich...   204   4e-50
ref|XP_003633526.1| PREDICTED: putative disease resistance RPP13...   200   7e-49
ref|XP_003633531.1| PREDICTED: putative disease resistance prote...   200   9e-49

>ref|XP_002269779.2| PREDICTED: putative disease resistance protein RGA3-like [Vitis
            vinifera]
          Length = 1091

 Score =  206 bits (524), Expect = 1e-50
 Identities = 123/296 (41%), Positives = 162/296 (54%), Gaps = 5/296 (1%)
 Frame = -1

Query: 1446 TPIRMLPKSFCSLYQIQVLKLRDCSKLVSLPKEMRKLTKLRHLDVDVPRLLVSMPPGFGD 1267
            T I+MLP S C+LY +Q L L +C+ L  LP +M+KL  LRHL++     L+ MPP  G+
Sbjct: 594  TRIKMLPPSVCTLYNLQSLILMNCNNLKGLPNDMKKLLNLRHLNLTGCWHLICMPPQIGE 653

Query: 1266 LTELQTLPAFVVCKEIGYHINELKHMVNLHGALCILRLENVFSLEEAKDAALDQKRYLDK 1087
            LT L+TL  FVV KE G  I ELK M  L   L I RLE+V  + E ++A L  K+YL +
Sbjct: 654  LTCLRTLHRFVVAKEKGCGIGELKGMTELRATLIIDRLEDVSMVSEGREANLKNKQYLRR 713

Query: 1086 LELQWSELRD-----GFELLVNLQPHTNLKELQIVGYGGAKFPSWIGNHRFSKLVNITIH 922
            LEL+WS         G ELL  L+PH NLKEL+I  Y GAKFP+W+G    S+L  I + 
Sbjct: 714  LELKWSPGHHMPHAIGEELLECLEPHGNLKELKIDVYHGAKFPNWMGYSLLSRLERIELS 773

Query: 921  DCKKCKFLSPFGKLPLLKSLSVSEMHEVKAIDHQFCGRNMXXXXXXXXXXXLWTVSENLV 742
             C   + L P G+LPLLK LS+  M E+++I  +FCG                       
Sbjct: 774  QCTYSRILPPLGQLPLLKYLSIDTMSELESISCEFCG----------------------- 810

Query: 741  NDNVFTAFPRLENLTLNGMPKLEKWSGIVEGDFPQLQKLNIFGCLELTGLPQLSLL 574
             +     FP LE + L  M  L++W  I EGDFP+L +L I        LP+   L
Sbjct: 811  -EGQIRGFPSLEKMKLEDMKNLKEWHEIEEGDFPRLHELTIKNSPNFASLPKFPSL 865



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 72/249 (28%), Positives = 104/249 (41%), Gaps = 5/249 (2%)
 Frame = -1

Query: 1137 LEEAKDAALDQKRYLDKLE-LQWSELRDGFELLVNLQPHTN-LKELQIVG-YGGAKFPSW 967
            L+E  +  L   ++L  L  L+ S  R    L   L  H N LKEL+I   Y        
Sbjct: 870  LDECNEMILGSVQFLSSLSSLKISNFRRLALLPEGLLQHLNSLKELRIQNFYRLEALKKE 929

Query: 966  IGNHRFSKLVNITIHDCKKCKFLSPFGKLPLLKSLSVSEMHEVKAIDHQFCGRNMXXXXX 787
            +G      L    I  C K   L   G    L+ LS+   + ++++              
Sbjct: 930  VGLQDLVSLQRFEILSCPKLVSLPEEGLSSALRYLSLCVCNSLQSLPKGL---------- 979

Query: 786  XXXXXXLWTVSENLVNDNVFTAFPRLENLTLNGMPKLEKWSGIVEGDFPQ-LQKLNIFGC 610
                       ENL +         LE L+++  PKL  +    E   P  L+ L I  C
Sbjct: 980  -----------ENLSS---------LEELSISKCPKLVTFP---EEKLPSSLKLLRISAC 1016

Query: 609  LELTGLPQ-LSLLDSMQKLEIRLCPLLESFPMDGLPNSLQDLVIIDCPVLKERCQKEVGE 433
              L  LP+ L+ L  +Q L I  C  L S P +GLP S++ L I    +L++RC+ E GE
Sbjct: 1017 ANLVSLPKRLNELSVLQHLAIDSCHALRSLPEEGLPASVRSLSIQRSQLLEKRCE-EGGE 1075

Query: 432  EWRKLAQIP 406
            +W K+A IP
Sbjct: 1076 DWNKIAHIP 1084


>ref|XP_002513078.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223548089|gb|EEF49581.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1096

 Score =  205 bits (522), Expect = 2e-50
 Identities = 119/299 (39%), Positives = 167/299 (55%), Gaps = 5/299 (1%)
 Frame = -1

Query: 1446 TPIRMLPKSFCSLYQIQVLKLRDCSKLVSLPKEMRKLTKLRHLDVDVPRLLVSMPPGFGD 1267
            T I+ LP S C+L  +Q L L  C+K ++LPK  + L  LRHL++     L SMPP FG 
Sbjct: 601  TEIKELPDSICNLCNLQTLILVGCNKFLTLPKCTKDLVNLRHLNLTGCWHLKSMPPSFGK 660

Query: 1266 LTELQTLPAFVVCKEIGYHINELKHMVNLHGALCILRLENVFSLEEAKDAALDQKRYLDK 1087
            LT LQ L  FVV K +   +NELK+M  L   LCI R+E+V ++E+AK+ +L  K+Y+ K
Sbjct: 661  LTSLQRLHRFVVGKGVECGLNELKNMNELRDTLCIDRVEDVLNIEDAKEVSLKSKQYIHK 720

Query: 1086 LELQWSE---LRDGF--ELLVNLQPHTNLKELQIVGYGGAKFPSWIGNHRFSKLVNITIH 922
            L L+WS     +D    ELL  L+PHTNL+EL +  Y G +FP W+GN   S L +I   
Sbjct: 721  LVLRWSRSQYSQDAIDEELLEYLEPHTNLRELMVDVYPGTRFPKWMGNSLLSHLESIEFI 780

Query: 921  DCKKCKFLSPFGKLPLLKSLSVSEMHEVKAIDHQFCGRNMXXXXXXXXXXXLWTVSENLV 742
             C  CK L P G+LP LKSL++S M E+++I  +F G                       
Sbjct: 781  HCNHCKTLPPLGQLPFLKSLTISMMQELESIGREFYG----------------------- 817

Query: 741  NDNVFTAFPRLENLTLNGMPKLEKWSGIVEGDFPQLQKLNIFGCLELTGLPQLSLLDSM 565
             +     FP L+ L L  M +L+KW  I +G+FP LQ+L +  C  +  LP+   L+ +
Sbjct: 818  -EGKIKGFPSLKILKLEDMIRLKKWQEIDQGEFPVLQQLALLNCPNVINLPRFPALEDL 875



 Score = 64.3 bits (155), Expect = 8e-08
 Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 20/200 (10%)
 Frame = -1

Query: 945  KLVNITIHDCKKCKFLSPFGKLPLLKSLSVSEMHEVKAIDHQ--------------FCGR 808
            K++N  + D     FL P   L  LK L +   + +KA+  +              FC  
Sbjct: 898  KILNFRLTDMLPKGFLQP---LAALKELKIQHFYRLKALQEEVGLQDLHSVQRLEIFCCP 954

Query: 807  NMXXXXXXXXXXXLWTVSENLVND-----NVFTAFPRLENLTLNGMPKLEKWSGIVEGDF 643
             +           L  +S  + N+     N       L+ L ++   KL  +  + +   
Sbjct: 955  KLESFAERGLPSMLQFLSIGMCNNMKDLPNGLENLSSLQELNISNCCKLLSFKTLPQS-- 1012

Query: 642  PQLQKLNIFGCLELTGLP-QLSLLDSMQKLEIRLCPLLESFPMDGLPNSLQDLVIIDCPV 466
              L+ L I  C  L  LP  L  L +++ L I+ C  L S P+ GLP+ L+ L I++C  
Sbjct: 1013 --LKNLRISACANLESLPTNLHELTNLEYLSIQSCQKLASLPVSGLPSCLRSLSIMECAS 1070

Query: 465  LKERCQKEVGEEWRKLAQIP 406
            L+ERC  E GE+W K+  IP
Sbjct: 1071 LEERC-AEGGEDWPKIQHIP 1089


>ref|XP_002297751.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222845009|gb|EEE82556.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1093

 Score =  204 bits (520), Expect = 4e-50
 Identities = 128/315 (40%), Positives = 169/315 (53%), Gaps = 8/315 (2%)
 Frame = -1

Query: 1446 TPIRMLPKSFCSLYQIQVLKLRDCSKLVSLPKEMRKLTKLRHLDVDVPRLLVSMPPGFGD 1267
            T IR+LP+S CSLY +Q L L +C  L +LP +   L  LRHL++     L+SMPP  G 
Sbjct: 598  TSIRVLPESICSLYNLQTLVLINCKNLHALPGDTNHLVNLRHLNLTGCGQLISMPPDIGK 657

Query: 1266 LTELQTLPAFVVCKEIGYHINELKHMVNLHGALCILRLENVFSLEEAKDAALDQKRYLDK 1087
            LT LQ L   V  K IG  I ELK+M  L   LCI  + +V ++ EAK+A L +K+Y+++
Sbjct: 658  LTSLQRLHRIVAGKGIGCGIGELKNMNELRATLCIDTVGDVPNITEAKEANLKKKQYINE 717

Query: 1086 LELQWSELR-DGF--ELLVNLQPHTNLKELQIVGYGGAKFPSWIGNHRFSKLVNITIHDC 916
            L L+W   R DG   ELL  L+PHTNL+EL+I  Y GAKFP+W+G    S L  I    C
Sbjct: 718  LVLRWGRCRPDGIDDELLECLEPHTNLRELRIDVYPGAKFPNWMGYSSLSHLEKIEFFHC 777

Query: 915  KKCKFLSPFGKLPLLKSLSVSEMHEVKAIDHQFCGRNMXXXXXXXXXXXLWTVSENLVND 736
              CK L P G+LP LKSLS+  M EV+ I  +F G                        +
Sbjct: 778  NYCKTLPPLGQLPSLKSLSIYMMCEVENIGREFYG------------------------E 813

Query: 735  NVFTAFPRLENLTLNGMPKLEKWSGIVEGDFPQLQKLNIFGCLELTGLPQLS-----LLD 571
                 FP LE L L  M  L++W  I  G+FP+LQ+L +  C  ++ LP+       LLD
Sbjct: 814  GKIKGFPSLEKLKLEDMRNLKEWQEIDHGEFPKLQELAVLNCPNISSLPKFPALCELLLD 873

Query: 570  SMQKLEIRLCPLLES 526
               +      PLL S
Sbjct: 874  DCNETIWSSVPLLTS 888



 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 59/218 (27%), Positives = 94/218 (43%), Gaps = 3/218 (1%)
 Frame = -1

Query: 1032 QPHTNLKELQIVGYGGAK-FPSWIGNHRFSKLVNITIHDCKKCKFLSPFGKLPLLKSLSV 856
            Q  ++LKEL+I  +   +     +G H    L  + I  C K +  S  G    L+ LS+
Sbjct: 909  QALSSLKELRIKHFYRLRTLQEELGLHDLPSLQRLEILFCPKLRSFSGKGFPLALQYLSI 968

Query: 855  SEMHEVKAIDHQFCGRNMXXXXXXXXXXXLWTVSENLVNDNVFTAFPRLENLTLNGMPKL 676
               +++K +                               N   +   L++L++   P+L
Sbjct: 969  RACNDLKDLP------------------------------NGLQSLSSLQDLSILNCPRL 998

Query: 675  EKWSGIVEGDFPQ-LQKLNIFGCLELTGLPQ-LSLLDSMQKLEIRLCPLLESFPMDGLPN 502
              +    E   P  L+ L I  C  L  LP  L  L +++ L I+ CP + S P  GLP 
Sbjct: 999  VSFP---EEKLPSSLKSLRISACANLESLPSGLHDLLNLESLGIQSCPKIASLPTLGLPA 1055

Query: 501  SLQDLVIIDCPVLKERCQKEVGEEWRKLAQIPSVWMND 388
            SL  L I DC +L ERC ++ GE+W K+A +   W+ +
Sbjct: 1056 SLSSLSIFDCELLDERC-RQGGEDWPKIAHVAQKWIGN 1092


>ref|XP_003633526.1| PREDICTED: putative disease resistance RPP13-like protein 1-like
            [Vitis vinifera]
          Length = 1308

 Score =  200 bits (509), Expect = 7e-49
 Identities = 135/371 (36%), Positives = 181/371 (48%), Gaps = 44/371 (11%)
 Frame = -1

Query: 1440 IRMLPKSFCSLYQIQVLKLRDCSKLVSLPKEMRKLTKLRHLDVDVPRLLVSMPPGFGDLT 1261
            I+ LP S   LY +Q L LRDC  L  +P  M  L  LRHLD+     L  MPP  G LT
Sbjct: 624  IKRLPNSVGHLYNLQTLILRDCWSLTEMPVGMGNLINLRHLDIAGTSQLQEMPPRMGSLT 683

Query: 1260 ELQTLPAFVVCKEIGYHINELKHMVNLHGALCILRLENVFSLEEAKDAALDQKRYLDKLE 1081
             LQTL  F+V K  G  I ELKH+++L G L I  L N  +  +A DA L  K ++++L 
Sbjct: 684  NLQTLSKFIVGKGNGSSIQELKHLLDLQGELSIQGLHNARNTRDAVDACLKNKCHIEELT 743

Query: 1080 LQWS--------ELRDGFELLVNLQPHTNLKELQIVGYGGAKFPSWIGNHRFSKLVNITI 925
            + WS        EL +   +L  LQP  NLK L +  YGG KFPSWIGN  FSK+ ++T+
Sbjct: 744  MGWSGDFDDSRNELNE-MLVLELLQPQRNLKNLTVEFYGGPKFPSWIGNPSFSKMESLTL 802

Query: 924  HDCKKCKFLSPFGKLPLLKSLSVSEMHEVKAIDHQFCGRNMXXXXXXXXXXXLWTVSENL 745
             +C KC  L   G+L LLK+L +  M +VK I  +F G                      
Sbjct: 803  KNCGKCTSLPCLGRLSLLKALHIQGMCKVKTIGDEFFG---------------------- 840

Query: 744  VNDNVFTAFPRLENLTLNGMPKLEKW---------------------------SGIVEGD 646
               ++F  FP LE+L    MP+ E W                           +G +   
Sbjct: 841  -EVSLFQPFPCLESLRFEDMPEWEDWCFSDMVEECEGLFCCLRELRIRECPKLTGSLPNC 899

Query: 645  FPQLQKLNIFGCLEL-TGLPQLSL--------LDSMQKLEIRLCPLLESFPMDGLPNSLQ 493
             P L +L IF C +L   LP+L+         L  +++L ++ CP LESFP  GLP+ L+
Sbjct: 900  LPSLTELEIFECPKLKAALPRLAYRLPNGLQSLTCLEELSLQSCPKLESFPEMGLPSMLR 959

Query: 492  DLVIIDCPVLK 460
             LV+  C  LK
Sbjct: 960  SLVLQKCKTLK 970


>ref|XP_003633531.1| PREDICTED: putative disease resistance protein RGA3-like [Vitis
            vinifera]
          Length = 961

 Score =  200 bits (508), Expect = 9e-49
 Identities = 120/296 (40%), Positives = 160/296 (54%), Gaps = 5/296 (1%)
 Frame = -1

Query: 1446 TPIRMLPKSFCSLYQIQVLKLRDCSKLVSLPKEMRKLTKLRHLDVDVPRLLVSMPPGFGD 1267
            T I+MLP S C+LY +Q L L +C+ L  LP +M+KL  LRHL++     L+ MPP  G+
Sbjct: 501  TRIKMLPPSVCTLYNLQSLILMNCNNLKGLPIDMKKLLNLRHLNLTGCWHLICMPPQIGE 560

Query: 1266 LTELQTLPAFVVCKEIGYHINELKHMVNLHGALCILRLENVFSLEEAKDAALDQKRYLDK 1087
            LT L+TL  F V KE G  I ELK M  L   L I RLE+V  + E ++A L  K+YL +
Sbjct: 561  LTCLRTLHRFFVAKEKGCGIGELKGMTELRATLIIDRLEDVSMVSEGREANLKNKQYLRR 620

Query: 1086 LELQWS-----ELRDGFELLVNLQPHTNLKELQIVGYGGAKFPSWIGNHRFSKLVNITIH 922
            LEL+WS         G ELL  L+PH NLKEL+I  Y GAKFP+W+G     +L  I + 
Sbjct: 621  LELKWSPGHHMPHATGEELLECLEPHGNLKELKIDVYHGAKFPNWMGYSLLPRLERIELS 680

Query: 921  DCKKCKFLSPFGKLPLLKSLSVSEMHEVKAIDHQFCGRNMXXXXXXXXXXXLWTVSENLV 742
             C   + L P G+LPLLK LS+  M E+++I  +FCG                       
Sbjct: 681  QCTYSRILPPLGQLPLLKYLSIDTMSELESISCEFCG----------------------- 717

Query: 741  NDNVFTAFPRLENLTLNGMPKLEKWSGIVEGDFPQLQKLNIFGCLELTGLPQLSLL 574
             +     FP LE + L  M  L++W  I +GDFP+L +L I        LP+   L
Sbjct: 718  -EGQIRGFPSLEKMKLEDMKNLKEWHEIEDGDFPRLHELTIKNSPNFASLPKFPSL 772


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