BLASTX nr result

ID: Coptis23_contig00016569 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016569
         (796 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278640.1| PREDICTED: uncharacterized protein LOC100250...   245   9e-63
ref|XP_002300862.1| predicted protein [Populus trichocarpa] gi|2...   238   1e-60
ref|XP_003617359.1| hypothetical protein MTR_5g090740 [Medicago ...   211   2e-52
ref|NP_001159160.1| hypothetical protein [Zea mays] gi|223942363...   202   5e-50
ref|XP_002459368.1| hypothetical protein SORBIDRAFT_02g003395 [S...   201   1e-49

>ref|XP_002278640.1| PREDICTED: uncharacterized protein LOC100250574 [Vitis vinifera]
           gi|302143513|emb|CBI22074.3| unnamed protein product
           [Vitis vinifera]
          Length = 217

 Score =  245 bits (625), Expect = 9e-63
 Identities = 114/199 (57%), Positives = 155/199 (77%), Gaps = 2/199 (1%)
 Frame = -2

Query: 765 NKMEFGVGCRPLIIAMKGHPGTGKSKLAHAIATTLRFPLIDKDDARDCTQPLTTSSSAKQ 586
           N+ +F +G  P+IIAMKGHPG+GKS LA +IA  LR PLIDKDD RD T PL  S+  + 
Sbjct: 2   NQEQFTIGQGPVIIAMKGHPGSGKSTLAQSIARVLRCPLIDKDDVRDSTSPLEPSTPDRL 61

Query: 585 LNDLSYQIIWRMAKTQLDLGLSVVIDSPLSRPAHLDHLKQIAAPSGAHILIIECMPHNEA 406
           LN LSY +IW++A TQL LGLSVV+DSPLSR +HLD L+++AA S A +L++EC P + +
Sbjct: 62  LNALSYDVIWQIASTQLRLGLSVVLDSPLSRRSHLDSLRRLAASSAASLLVVECRPRDHS 121

Query: 405 KWRQRLEERGM--NDDANWHKPATWQDLEKLVEDYNGCYDYDVGDVPKLVIDTTAEVDVQ 232
           +WR+RLE RG+  +D ++WHKP+TWQDLE+L+E+Y+GC +Y+ GDVP++V+DTTA V + 
Sbjct: 122 EWRRRLERRGLGESDGSSWHKPSTWQDLERLLEEYDGCTNYEFGDVPRMVVDTTAPVGLG 181

Query: 231 ELVSTVLRFIVTHAGSGSS 175
           E+V+ V+ FI  HAG G S
Sbjct: 182 EMVAAVVEFIAAHAGGGHS 200


>ref|XP_002300862.1| predicted protein [Populus trichocarpa] gi|222842588|gb|EEE80135.1|
           predicted protein [Populus trichocarpa]
          Length = 203

 Score =  238 bits (607), Expect = 1e-60
 Identities = 114/189 (60%), Positives = 147/189 (77%), Gaps = 4/189 (2%)
 Frame = -2

Query: 735 PLIIAMKGHPGTGKSKLAHAIATTLRFPLIDKDDARDCTQPLTTSSSAKQ----LNDLSY 568
           P+IIAMKGHPGTGKS LA ++A++L+ PLIDKDD RDCT  +  SS A      LNDLSY
Sbjct: 12  PVIIAMKGHPGTGKSTLASSLASSLKIPLIDKDDVRDCTVSIQNSSPATASKVLLNDLSY 71

Query: 567 QIIWRMAKTQLDLGLSVVIDSPLSRPAHLDHLKQIAAPSGAHILIIECMPHNEAKWRQRL 388
            ++W++A TQL LGLSV+IDSPLSR AHLD L Q+A+ +G+ ++I+EC P +E  WR+RL
Sbjct: 72  DVVWQIASTQLRLGLSVIIDSPLSRRAHLDRLVQVASSTGSLLVIVECKPLDEGVWRRRL 131

Query: 387 EERGMNDDANWHKPATWQDLEKLVEDYNGCYDYDVGDVPKLVIDTTAEVDVQELVSTVLR 208
           E+RG  D A+WHKP+TWQDLE+L+E Y G  DYDVGDVPK+V+DT+  V V ELVS V+ 
Sbjct: 132 EQRGKGDQASWHKPSTWQDLERLLEGYGGSTDYDVGDVPKIVLDTSVAVAVDELVSRVVD 191

Query: 207 FIVTHAGSG 181
           F+V+ A +G
Sbjct: 192 FVVSSACTG 200


>ref|XP_003617359.1| hypothetical protein MTR_5g090740 [Medicago truncatula]
           gi|355518694|gb|AET00318.1| hypothetical protein
           MTR_5g090740 [Medicago truncatula]
          Length = 190

 Score =  211 bits (536), Expect = 2e-52
 Identities = 104/182 (57%), Positives = 137/182 (75%), Gaps = 1/182 (0%)
 Frame = -2

Query: 732 LIIAMKGHPGTGKSKLAHAIATTLRFPLIDKDDARDC-TQPLTTSSSAKQLNDLSYQIIW 556
           +IIAMKGHPGTGKS LA +IA++L+ PLIDKDD +DC T PL  ++    LN+LSY  I+
Sbjct: 8   VIIAMKGHPGTGKSTLAKSIASSLKIPLIDKDDIKDCITTPLIQTTPPSLLNELSYSAIF 67

Query: 555 RMAKTQLDLGLSVVIDSPLSRPAHLDHLKQIAAPSGAHILIIECMPHNEAKWRQRLEERG 376
           ++A TQL +GLS++IDSPLSR +HLD L+ +A   GA ++IIEC P ++  WR+R+EERG
Sbjct: 68  QIASTQLRVGLSLIIDSPLSRRSHLDRLRSLAGEYGARVVIIECRPGDKGLWRRRVEERG 127

Query: 375 MNDDANWHKPATWQDLEKLVEDYNGCYDYDVGDVPKLVIDTTAEVDVQELVSTVLRFIVT 196
                  HKPATW++LEK+VE Y GC +YDVG VPKLV+DTT +VD+++L S  L FI  
Sbjct: 128 ---GGGGHKPATWEELEKIVEGYGGCDEYDVGGVPKLVMDTTEDVDLEKLCSHALEFIED 184

Query: 195 HA 190
           HA
Sbjct: 185 HA 186


>ref|NP_001159160.1| hypothetical protein [Zea mays] gi|223942363|gb|ACN25265.1| unknown
           [Zea mays] gi|414883595|tpg|DAA59609.1| TPA:
           hypothetical protein ZEAMMB73_694502 [Zea mays]
          Length = 211

 Score =  202 bits (515), Expect = 5e-50
 Identities = 100/188 (53%), Positives = 131/188 (69%), Gaps = 6/188 (3%)
 Frame = -2

Query: 738 RPLIIAMKGHPGTGKSKLAHAIATTLRFPLIDKDDARDCTQPLTTSSSAKQLNDLSYQII 559
           RP+++AMKGHPG+GKS  A AIAT L  PL+DKDD RDC  PL   ++A  LNDLSY ++
Sbjct: 10  RPVVVAMKGHPGSGKSTAARAIATALCCPLLDKDDVRDCMLPLEGLAAAGMLNDLSYAVL 69

Query: 558 WRMAKTQLDLGLSVVIDSPLSRPAHLDHLKQIAAPSGAHILIIECMPHNEAKWRQRLEER 379
           WRMA+ Q+ LGLSVVIDSPLSR +HLD L ++A   G  ++++EC P +  +WR+RLE R
Sbjct: 70  WRMAERQVRLGLSVVIDSPLSRRSHLDMLTRLA---GVLVVVVECRPGDNEEWRRRLESR 126

Query: 378 GM-----NDDANWHKPATWQDLEKLVEDYNGCYDYDVGDVPKLVIDTT-AEVDVQELVST 217
           G           WHKP TW +LE+L+E Y GC DY++GDVP++V+DTT   VD Q     
Sbjct: 127 GSAVANGGGGDGWHKPKTWAELERLLEGYQGCTDYEIGDVPRIVVDTTDPTVDAQVAAEK 186

Query: 216 VLRFIVTH 193
           V+ FI +H
Sbjct: 187 VVVFIRSH 194


>ref|XP_002459368.1| hypothetical protein SORBIDRAFT_02g003395 [Sorghum bicolor]
           gi|241922745|gb|EER95889.1| hypothetical protein
           SORBIDRAFT_02g003395 [Sorghum bicolor]
          Length = 220

 Score =  201 bits (512), Expect = 1e-49
 Identities = 99/183 (54%), Positives = 130/183 (71%), Gaps = 6/183 (3%)
 Frame = -2

Query: 732 LIIAMKGHPGTGKSKLAHAIATTLRFPLIDKDDARDCTQPLTTSSSAKQLNDLSYQIIWR 553
           +++AMKGHPG+GKS  A AIA  L +PL+DKDD RDCT PL   ++A  LNDLSY ++WR
Sbjct: 13  VVVAMKGHPGSGKSTAARAIAAALGWPLLDKDDVRDCTLPLEGLAAAGILNDLSYAVLWR 72

Query: 552 MAKTQLDLGLSVVIDSPLSRPAHLDHLKQIAAPSGAHILIIECMPHNEAKWRQRLEERGM 373
           MA+ Q+ LGLSVVIDSPLSR AHLD L ++A   GA ++++EC P +  +WR+RLE RG 
Sbjct: 73  MAERQVRLGLSVVIDSPLSRRAHLDALTRLA---GALVVVVECRPGDNEEWRRRLESRGA 129

Query: 372 -----NDDANWHKPATWQDLEKLVEDYNGCYDYDVGDVPKLVIDTT-AEVDVQELVSTVL 211
                     WHKP TW +LE+L+E Y GC DY++GDVP++V+DTT   VD Q +   V+
Sbjct: 130 AVPNGGGSDGWHKPKTWAELERLLEGYQGCTDYEIGDVPRIVVDTTDPAVDAQAIAEKVV 189

Query: 210 RFI 202
            FI
Sbjct: 190 GFI 192


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