BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016568
         (1147 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]             101   4e-19
gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsi...   101   4e-19
gb|AAD20101.1| putative retroelement pol polyprotein [Arabidopsi...    99   2e-18
emb|CAN69925.1| hypothetical protein VITISV_027208 [Vitis vinifera]    98   4e-18
emb|CAN82803.1| hypothetical protein VITISV_024865 [Vitis vinifera]    97   1e-17

>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  101 bits (251), Expect = 4e-19
 Identities = 48/81 (59%), Positives = 60/81 (74%)
 Frame = +1

Query: 1   TMEVYIDDMVVKSKKSGDHLDHLEQAFSRLRRTQMKLNPEKCLFGASSEKFLGYQVSQRG 180
           TMEVYIDDM+VKS K  DH+ HLE+ F  L + QMKLNP KC FG  S +FLGY V++RG
Sbjct: 170 TMEVYIDDMLVKSLKKEDHVKHLEECFGILNKYQMKLNPAKCTFGVPSGEFLGYIVTERG 229

Query: 181 IETNLDQIQAFLDVPDDKHLK 243
           IE N +QI AFL++P  ++ K
Sbjct: 230 IEANSNQINAFLNMPSPRNFK 250


>gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1466

 Score =  101 bits (251), Expect = 4e-19
 Identities = 48/81 (59%), Positives = 61/81 (75%)
 Frame = +1

Query: 1   TMEVYIDDMVVKSKKSGDHLDHLEQAFSRLRRTQMKLNPEKCLFGASSEKFLGYQVSQRG 180
           TMEVYIDDM++KS K  DH+ HLE+ F+ L + QMKLNP KC FG  S +FLGY V++RG
Sbjct: 613 TMEVYIDDMLIKSLKKEDHVKHLEECFAILNQYQMKLNPAKCTFGVPSGEFLGYIVTKRG 672

Query: 181 IETNLDQIQAFLDVPDDKHLK 243
           IE N +QI AFL++P  K+ K
Sbjct: 673 IEANPNQINAFLNMPSPKNFK 693


>gb|AAD20101.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 764

 Score = 99.4 bits (246), Expect = 2e-18
 Identities = 47/81 (58%), Positives = 60/81 (74%)
 Frame = +1

Query: 1   TMEVYIDDMVVKSKKSGDHLDHLEQAFSRLRRTQMKLNPEKCLFGASSEKFLGYQVSQRG 180
           TMEVYIDDM+VKS +S DH+DHL+  F  L +  MKLNP KCLFG +S +FLGY V++RG
Sbjct: 646 TMEVYIDDMLVKSTRSADHIDHLKACFETLNKYNMKLNPAKCLFGVTSGEFLGYIVTKRG 705

Query: 181 IETNLDQIQAFLDVPDDKHLK 243
           IE N  QI+A LD+   ++ K
Sbjct: 706 IEANPKQIRAILDLQSPRNKK 726


>emb|CAN69925.1| hypothetical protein VITISV_027208 [Vitis vinifera]
          Length = 982

 Score = 97.8 bits (242), Expect = 4e-18
 Identities = 46/81 (56%), Positives = 60/81 (74%)
 Frame = +1

Query: 1   TMEVYIDDMVVKSKKSGDHLDHLEQAFSRLRRTQMKLNPEKCLFGASSEKFLGYQVSQRG 180
           T+EVYIDD+VVKSK   +H+ HL++ F  LRR  MKLNP KC FG S+ KFLG+ VSQRG
Sbjct: 170 TVEVYIDDIVVKSKTLEEHVQHLQEVFHLLRRYDMKLNPSKCAFGVSAGKFLGFMVSQRG 229

Query: 181 IETNLDQIQAFLDVPDDKHLK 243
           IE + DQI+A ++ P  ++ K
Sbjct: 230 IEVSPDQIKAVMETPPPRNKK 250


>emb|CAN82803.1| hypothetical protein VITISV_024865 [Vitis vinifera]
          Length = 763

 Score = 96.7 bits (239), Expect = 1e-17
 Identities = 44/81 (54%), Positives = 59/81 (72%)
 Frame = +1

Query: 1   TMEVYIDDMVVKSKKSGDHLDHLEQAFSRLRRTQMKLNPEKCLFGASSEKFLGYQVSQRG 180
           T+EVY+DD+VVKSK  G+H  HL++ F  LR   MKLNP KC FG S+ KFLG+ VSQRG
Sbjct: 127 TVEVYVDDIVVKSKTQGEHALHLQEVFQLLRNYDMKLNPSKCAFGMSAGKFLGFMVSQRG 186

Query: 181 IETNLDQIQAFLDVPDDKHLK 243
           IE + DQ++A ++ P  ++ K
Sbjct: 187 IEVSPDQVKAVMETPPPRNKK 207