BLASTX nr result

ID: Coptis23_contig00016555 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016555
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518179.1| conserved hypothetical protein [Ricinus comm...    87   1e-15
ref|XP_003634452.1| PREDICTED: uncharacterized protein LOC100852...    86   3e-15
emb|CBI19623.3| unnamed protein product [Vitis vinifera]               86   3e-15
ref|XP_002302461.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-15
emb|CAN79165.1| hypothetical protein VITISV_019247 [Vitis vinifera]    86   4e-15

>ref|XP_002518179.1| conserved hypothetical protein [Ricinus communis]
           gi|223542775|gb|EEF44312.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 179

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 43/71 (60%), Positives = 53/71 (74%)
 Frame = +1

Query: 25  LLVLVSPVTHKKSRKPQTRPWLALSLYIQQPQTAISTDPRPTSFDSKGAFIFHHTLTEGP 204
           LL  +SP  HK   K   +PWLALSLYIQQPQ++ S+  +PT+     A+IFHHTLTEGP
Sbjct: 20  LLSFLSPKPHKSLSKDPNKPWLALSLYIQQPQSS-SSSVQPTARSDAEAYIFHHTLTEGP 78

Query: 205 ENTSRVVGRAQ 237
           ENTSRV+G+AQ
Sbjct: 79  ENTSRVLGKAQ 89


>ref|XP_003634452.1| PREDICTED: uncharacterized protein LOC100852474 [Vitis vinifera]
          Length = 177

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 45/71 (63%), Positives = 49/71 (69%)
 Frame = +1

Query: 25  LLVLVSPVTHKKSRKPQTRPWLALSLYIQQPQTAISTDPRPTSFDSKGAFIFHHTLTEGP 204
           LL L SPV H+K  K  TRPWLALSLYIQQP    +   RP      GAFIFH TLT+GP
Sbjct: 21  LLALFSPVAHRKPSKHHTRPWLALSLYIQQPLIP-THQRRPVLQSDSGAFIFHRTLTKGP 79

Query: 205 ENTSRVVGRAQ 237
           ENTS VVG+AQ
Sbjct: 80  ENTSMVVGQAQ 90


>emb|CBI19623.3| unnamed protein product [Vitis vinifera]
          Length = 651

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 45/71 (63%), Positives = 49/71 (69%)
 Frame = +1

Query: 25  LLVLVSPVTHKKSRKPQTRPWLALSLYIQQPQTAISTDPRPTSFDSKGAFIFHHTLTEGP 204
           LL L SPV H+K  K  TRPWLALSLYIQQP    +   RP      GAFIFH TLT+GP
Sbjct: 495 LLALFSPVAHRKPSKHHTRPWLALSLYIQQPLIP-THQRRPVLQSDSGAFIFHRTLTKGP 553

Query: 205 ENTSRVVGRAQ 237
           ENTS VVG+AQ
Sbjct: 554 ENTSMVVGQAQ 564


>ref|XP_002302461.1| predicted protein [Populus trichocarpa] gi|222844187|gb|EEE81734.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 46/76 (60%), Positives = 54/76 (71%), Gaps = 5/76 (6%)
 Frame = +1

Query: 25  LLVLVSPVTHKK-----SRKPQTRPWLALSLYIQQPQTAISTDPRPTSFDSKGAFIFHHT 189
           LL L+SPV H K     S +P+ RPWLALSLYIQQPQ + S+D +P      GAFIFH  
Sbjct: 45  LLALISPVPHDKNQSDNSTRPRPRPWLALSLYIQQPQIS-SSDVQPAVRSEAGAFIFHRK 103

Query: 190 LTEGPENTSRVVGRAQ 237
           LTEG ENTSRV+G+AQ
Sbjct: 104 LTEGLENTSRVIGKAQ 119


>emb|CAN79165.1| hypothetical protein VITISV_019247 [Vitis vinifera]
          Length = 1138

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 45/71 (63%), Positives = 49/71 (69%)
 Frame = +1

Query: 25   LLVLVSPVTHKKSRKPQTRPWLALSLYIQQPQTAISTDPRPTSFDSKGAFIFHHTLTEGP 204
            LL L SPV H+K  K  TRPWLALSLYIQQP    +   RP      GAFIFH TLT+GP
Sbjct: 982  LLALFSPVAHRKPSKHHTRPWLALSLYIQQPLIP-THHRRPVLQSDSGAFIFHRTLTKGP 1040

Query: 205  ENTSRVVGRAQ 237
            ENTS VVG+AQ
Sbjct: 1041 ENTSMVVGQAQ 1051


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