BLASTX nr result
ID: Coptis23_contig00016555
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00016555 (238 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002518179.1| conserved hypothetical protein [Ricinus comm... 87 1e-15 ref|XP_003634452.1| PREDICTED: uncharacterized protein LOC100852... 86 3e-15 emb|CBI19623.3| unnamed protein product [Vitis vinifera] 86 3e-15 ref|XP_002302461.1| predicted protein [Populus trichocarpa] gi|2... 86 3e-15 emb|CAN79165.1| hypothetical protein VITISV_019247 [Vitis vinifera] 86 4e-15 >ref|XP_002518179.1| conserved hypothetical protein [Ricinus communis] gi|223542775|gb|EEF44312.1| conserved hypothetical protein [Ricinus communis] Length = 179 Score = 87.0 bits (214), Expect = 1e-15 Identities = 43/71 (60%), Positives = 53/71 (74%) Frame = +1 Query: 25 LLVLVSPVTHKKSRKPQTRPWLALSLYIQQPQTAISTDPRPTSFDSKGAFIFHHTLTEGP 204 LL +SP HK K +PWLALSLYIQQPQ++ S+ +PT+ A+IFHHTLTEGP Sbjct: 20 LLSFLSPKPHKSLSKDPNKPWLALSLYIQQPQSS-SSSVQPTARSDAEAYIFHHTLTEGP 78 Query: 205 ENTSRVVGRAQ 237 ENTSRV+G+AQ Sbjct: 79 ENTSRVLGKAQ 89 >ref|XP_003634452.1| PREDICTED: uncharacterized protein LOC100852474 [Vitis vinifera] Length = 177 Score = 85.9 bits (211), Expect = 3e-15 Identities = 45/71 (63%), Positives = 49/71 (69%) Frame = +1 Query: 25 LLVLVSPVTHKKSRKPQTRPWLALSLYIQQPQTAISTDPRPTSFDSKGAFIFHHTLTEGP 204 LL L SPV H+K K TRPWLALSLYIQQP + RP GAFIFH TLT+GP Sbjct: 21 LLALFSPVAHRKPSKHHTRPWLALSLYIQQPLIP-THQRRPVLQSDSGAFIFHRTLTKGP 79 Query: 205 ENTSRVVGRAQ 237 ENTS VVG+AQ Sbjct: 80 ENTSMVVGQAQ 90 >emb|CBI19623.3| unnamed protein product [Vitis vinifera] Length = 651 Score = 85.9 bits (211), Expect = 3e-15 Identities = 45/71 (63%), Positives = 49/71 (69%) Frame = +1 Query: 25 LLVLVSPVTHKKSRKPQTRPWLALSLYIQQPQTAISTDPRPTSFDSKGAFIFHHTLTEGP 204 LL L SPV H+K K TRPWLALSLYIQQP + RP GAFIFH TLT+GP Sbjct: 495 LLALFSPVAHRKPSKHHTRPWLALSLYIQQPLIP-THQRRPVLQSDSGAFIFHRTLTKGP 553 Query: 205 ENTSRVVGRAQ 237 ENTS VVG+AQ Sbjct: 554 ENTSMVVGQAQ 564 >ref|XP_002302461.1| predicted protein [Populus trichocarpa] gi|222844187|gb|EEE81734.1| predicted protein [Populus trichocarpa] Length = 216 Score = 85.9 bits (211), Expect = 3e-15 Identities = 46/76 (60%), Positives = 54/76 (71%), Gaps = 5/76 (6%) Frame = +1 Query: 25 LLVLVSPVTHKK-----SRKPQTRPWLALSLYIQQPQTAISTDPRPTSFDSKGAFIFHHT 189 LL L+SPV H K S +P+ RPWLALSLYIQQPQ + S+D +P GAFIFH Sbjct: 45 LLALISPVPHDKNQSDNSTRPRPRPWLALSLYIQQPQIS-SSDVQPAVRSEAGAFIFHRK 103 Query: 190 LTEGPENTSRVVGRAQ 237 LTEG ENTSRV+G+AQ Sbjct: 104 LTEGLENTSRVIGKAQ 119 >emb|CAN79165.1| hypothetical protein VITISV_019247 [Vitis vinifera] Length = 1138 Score = 85.5 bits (210), Expect = 4e-15 Identities = 45/71 (63%), Positives = 49/71 (69%) Frame = +1 Query: 25 LLVLVSPVTHKKSRKPQTRPWLALSLYIQQPQTAISTDPRPTSFDSKGAFIFHHTLTEGP 204 LL L SPV H+K K TRPWLALSLYIQQP + RP GAFIFH TLT+GP Sbjct: 982 LLALFSPVAHRKPSKHHTRPWLALSLYIQQPLIP-THHRRPVLQSDSGAFIFHRTLTKGP 1040 Query: 205 ENTSRVVGRAQ 237 ENTS VVG+AQ Sbjct: 1041 ENTSMVVGQAQ 1051