BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016552
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containi...   190   2e-46
emb|CAN66974.1| hypothetical protein VITISV_022076 [Vitis vinifera]   190   2e-46
ref|XP_002301427.1| predicted protein [Populus trichocarpa] gi|2...   185   5e-45
ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containi...   174   1e-41
ref|XP_003529880.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   170   2e-40

>ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08510-like [Vitis vinifera]
          Length = 512

 Score =  190 bits (482), Expect = 2e-46
 Identities = 94/147 (63%), Positives = 111/147 (75%)
 Frame = +2

Query: 2   VDLLGRAGFLNEAYGLLKKMPMKPDAVVWGALLGACSFHGNVKXXXXXXXXXXXXXPRNP 181
           VDLLGRAG L EA+ L+ +MPM+PD+VVWG LLGACSFHG+V+             P NP
Sbjct: 360 VDLLGRAGELREAHDLILRMPMEPDSVVWGTLLGACSFHGHVELAEKAAGALFELEPSNP 419

Query: 182 GIYVILSNVYASRGRWDGVAKVRKLMKGKQFTKAVGYSFIEVDGIVHKFFVEDRSHPRSD 361
           G YVILSN+YA+ GRWDGVA++RKLMKG + TKA GYSFIE  G +HKF VEDRSH RSD
Sbjct: 420 GNYVILSNIYATAGRWDGVARLRKLMKGGKITKAAGYSFIEEGGHIHKFIVEDRSHSRSD 479

Query: 362 EVYALLDEILCRMKLLCLESDLDSEIE 442
           E+YALLDE+  +MKL    +D DSEIE
Sbjct: 480 EIYALLDEVSMKMKLHGNVNDSDSEIE 506


>emb|CAN66974.1| hypothetical protein VITISV_022076 [Vitis vinifera]
          Length = 967

 Score =  190 bits (482), Expect = 2e-46
 Identities = 94/147 (63%), Positives = 111/147 (75%)
 Frame = +2

Query: 2    VDLLGRAGFLNEAYGLLKKMPMKPDAVVWGALLGACSFHGNVKXXXXXXXXXXXXXPRNP 181
            VDLLGRAG L EA+ L+ +MPM+PD+VVWG LLGACSFHG+V+             P NP
Sbjct: 815  VDLLGRAGELREAHDLILRMPMEPDSVVWGTLLGACSFHGHVELAEKAAGALFELEPSNP 874

Query: 182  GIYVILSNVYASRGRWDGVAKVRKLMKGKQFTKAVGYSFIEVDGIVHKFFVEDRSHPRSD 361
            G YVILSN+YA+ GRWDGVA++RKLMKG + TKA GYSFIE  G +HKF VEDRSH RSD
Sbjct: 875  GNYVILSNIYATAGRWDGVARLRKLMKGGKITKAAGYSFIEEGGHIHKFIVEDRSHSRSD 934

Query: 362  EVYALLDEILCRMKLLCLESDLDSEIE 442
            E+YALLDE+  +MKL    +D DSEIE
Sbjct: 935  EIYALLDEVSMKMKLHGNVNDSDSEIE 961


>ref|XP_002301427.1| predicted protein [Populus trichocarpa] gi|222843153|gb|EEE80700.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score =  185 bits (469), Expect = 5e-45
 Identities = 92/147 (62%), Positives = 105/147 (71%)
 Frame = +2

Query: 2   VDLLGRAGFLNEAYGLLKKMPMKPDAVVWGALLGACSFHGNVKXXXXXXXXXXXXXPRNP 181
           VDLLGRAG L EAY L+K MPMKPD+V+WG LLGACSFH NV+             P NP
Sbjct: 288 VDLLGRAGELQEAYDLVKSMPMKPDSVIWGTLLGACSFHSNVEFAEIAAESLFQVEPWNP 347

Query: 182 GIYVILSNVYASRGRWDGVAKVRKLMKGKQFTKAVGYSFIEVDGIVHKFFVEDRSHPRSD 361
           G YVIL N+YAS  RWDGVAK+RKLMKG Q TKA GYS IE +G +HKF VED+SHPR  
Sbjct: 348 GNYVILCNIYASAQRWDGVAKLRKLMKGGQITKAAGYSVIEGEGEIHKFIVEDKSHPRHY 407

Query: 362 EVYALLDEILCRMKLLCLESDLDSEIE 442
           E+YALL+EI  +MKL   E D   E+E
Sbjct: 408 EIYALLNEISTKMKLQITEDDFKPELE 434


>ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08510-like [Glycine max]
          Length = 512

 Score =  174 bits (440), Expect = 1e-41
 Identities = 83/135 (61%), Positives = 103/135 (76%)
 Frame = +2

Query: 2   VDLLGRAGFLNEAYGLLKKMPMKPDAVVWGALLGACSFHGNVKXXXXXXXXXXXXXPRNP 181
           VDLLGRAG L EAY ++++MPMKPD+V+WGALLGACSFH NV+             P NP
Sbjct: 361 VDLLGRAGQLREAYEVIQRMPMKPDSVIWGALLGACSFHDNVELAEIAAESLFALEPWNP 420

Query: 182 GIYVILSNVYASRGRWDGVAKVRKLMKGKQFTKAVGYSFIEVDGIVHKFFVEDRSHPRSD 361
           G YVILSN+YAS G+WDGVAK+RK+MKG + TK+ G+SFIE  G +HKF VEDRSHP S+
Sbjct: 421 GNYVILSNIYASAGQWDGVAKLRKVMKGSKITKSAGHSFIEEGGQLHKFIVEDRSHPESN 480

Query: 362 EVYALLDEILCRMKL 406
           E++ALLD +   +KL
Sbjct: 481 EIFALLDGVYEMIKL 495


>ref|XP_003529880.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g08510-like [Glycine max]
          Length = 474

 Score =  170 bits (430), Expect = 2e-40
 Identities = 84/148 (56%), Positives = 107/148 (72%), Gaps = 2/148 (1%)
 Frame = +2

Query: 2   VDLLGRAGFLNEAYGLLKKMPMKPDAVVWGALLGACSFHGNVKXXXXXXXXXXXXXPRNP 181
           VDLLGRAG L EAY +++ M MKPD+V+WGALLGACSFHGNV+             P NP
Sbjct: 325 VDLLGRAGQLREAYEVIQSMSMKPDSVIWGALLGACSFHGNVELAEIAAESLFVLEPWNP 384

Query: 182 GIYVILSNVYASRGRWDGVAKVRKLMKGKQFTKAVGYSFIEVDGIVHKFFVEDRSHPRSD 361
           G YVILSN+YAS G+WDGVAK+RK+MKG + TK+ G+SFIE    +HKF V+DRSHP+S+
Sbjct: 385 GNYVILSNIYASAGQWDGVAKLRKVMKGSKITKSAGHSFIEEGAQLHKFIVKDRSHPKSN 444

Query: 362 EVYALLDEILCRMKLL--CLESDLDSEI 439
           E++ALLD +   +KL     E  LD ++
Sbjct: 445 EIFALLDGVYEMVKLTRSAFECHLDLDL 472