BLASTX nr result

ID: Coptis23_contig00016547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016547
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283312.1| PREDICTED: probable kinetochore protein NUF2...    97   1e-18
emb|CAN82250.1| hypothetical protein VITISV_036492 [Vitis vinifera]    97   1e-18
ref|XP_003525009.1| PREDICTED: uncharacterized protein LOC100815...    97   2e-18
gb|ACU21205.1| unknown [Glycine max]                                   97   2e-18
ref|XP_002529275.1| kinetochore protein nuf2, putative [Ricinus ...    94   1e-17

>ref|XP_002283312.1| PREDICTED: probable kinetochore protein NUF2 [Vitis vinifera]
           gi|296082133|emb|CBI21138.3| unnamed protein product
           [Vitis vinifera]
          Length = 453

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 56/143 (39%), Positives = 78/143 (54%)
 Frame = -1

Query: 437 SSYSFPMLTRKEIATVLLESQLAENITEQNLINPTPELVTXXXXXXXXXXXXXXXXXXXX 258
           S + +PML R +I  +L ES++A  + E NLINP P+ V+                    
Sbjct: 2   SKFEYPMLPRSDIIAILNESKIA-TVYEDNLINPNPDFVSD------------------- 41

Query: 257 XXXXXXXXXXXXXKLYTNLLSNLDPLEGDEHGQLDFDALGHLENPDHHGDSVKVINLLHK 78
                         LYT LL +LD L+ D  GQ++F AL  LENPD H DSV+V+NL  K
Sbjct: 42  --------------LYTRLLIHLDSLQEDP-GQIEFAALEQLENPDWHRDSVRVMNLYSK 86

Query: 77  VNEVIAAVHCPVNFNLKDLVKPD 9
           + E++A++ CP  F LKDL++PD
Sbjct: 87  IKELVASLECPKKFTLKDLIRPD 109


>emb|CAN82250.1| hypothetical protein VITISV_036492 [Vitis vinifera]
          Length = 473

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 56/143 (39%), Positives = 78/143 (54%)
 Frame = -1

Query: 437 SSYSFPMLTRKEIATVLLESQLAENITEQNLINPTPELVTXXXXXXXXXXXXXXXXXXXX 258
           S + +PML R +I  +L ES++A  + E NLINP P+ V+                    
Sbjct: 2   SKFEYPMLPRSDIIAILNESKIA-TVYEDNLINPNPDFVSD------------------- 41

Query: 257 XXXXXXXXXXXXXKLYTNLLSNLDPLEGDEHGQLDFDALGHLENPDHHGDSVKVINLLHK 78
                         LYT LL +LD L+ D  GQ++F AL  LENPD H DSV+V+NL  K
Sbjct: 42  --------------LYTRLLIHLDSLQEDP-GQIEFAALEQLENPDWHRDSVRVMNLYSK 86

Query: 77  VNEVIAAVHCPVNFNLKDLVKPD 9
           + E++A++ CP  F LKDL++PD
Sbjct: 87  IKELVASLECPKKFTLKDLIRPD 109


>ref|XP_003525009.1| PREDICTED: uncharacterized protein LOC100815227 [Glycine max]
          Length = 461

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 54/146 (36%), Positives = 78/146 (53%)
 Frame = -1

Query: 446 MAGSSYSFPMLTRKEIATVLLESQLAENITEQNLINPTPELVTXXXXXXXXXXXXXXXXX 267
           MA S+Y +P L R EI T+L + Q+A N+TEQ+  NP P+ ++                 
Sbjct: 1   MAESNYEYPRLRRPEIVTILAQLQIA-NVTEQDFTNPNPDFISD---------------- 43

Query: 266 XXXXXXXXXXXXXXXXKLYTNLLSNLDPLEGDEHGQLDFDALGHLENPDHHGDSVKVINL 87
                            LYT +L +LD L  +++ QL+F AL HLENPD H DSV+ + L
Sbjct: 44  -----------------LYTRVLIHLDILLEEDNEQLEFHALEHLENPDFHLDSVRAVKL 86

Query: 86  LHKVNEVIAAVHCPVNFNLKDLVKPD 9
            +++NEV+  + CP  F L DL+ PD
Sbjct: 87  YNQINEVLTTLECPRKFTLADLLMPD 112


>gb|ACU21205.1| unknown [Glycine max]
          Length = 297

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 54/146 (36%), Positives = 78/146 (53%)
 Frame = -1

Query: 446 MAGSSYSFPMLTRKEIATVLLESQLAENITEQNLINPTPELVTXXXXXXXXXXXXXXXXX 267
           MA S+Y +P L R EI T+L + Q+A N+TEQ+  NP P+ ++                 
Sbjct: 1   MAESNYEYPRLRRPEIVTILAQLQIA-NVTEQDFTNPNPDFISD---------------- 43

Query: 266 XXXXXXXXXXXXXXXXKLYTNLLSNLDPLEGDEHGQLDFDALGHLENPDHHGDSVKVINL 87
                            LYT +L +LD L  +++ QL+F AL HLENPD H DSV+ + L
Sbjct: 44  -----------------LYTRVLIHLDILLEEDNEQLEFHALEHLENPDFHLDSVRAVKL 86

Query: 86  LHKVNEVIAAVHCPVNFNLKDLVKPD 9
            +++NEV+  + CP  F L DL+ PD
Sbjct: 87  YNQINEVLTTLECPRKFTLADLLMPD 112


>ref|XP_002529275.1| kinetochore protein nuf2, putative [Ricinus communis]
           gi|223531264|gb|EEF33107.1| kinetochore protein nuf2,
           putative [Ricinus communis]
          Length = 450

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 50/142 (35%), Positives = 78/142 (54%)
 Frame = -1

Query: 437 SSYSFPMLTRKEIATVLLESQLAENITEQNLINPTPELVTXXXXXXXXXXXXXXXXXXXX 258
           S + +P L+R EIAT+L ESQ+A  +TE ++ NP P+ ++                    
Sbjct: 2   SKFDYPRLSRAEIATILAESQIAA-VTENDIKNPNPDFISD------------------- 41

Query: 257 XXXXXXXXXXXXXKLYTNLLSNLDPLEGDEHGQLDFDALGHLENPDHHGDSVKVINLLHK 78
                         +YT LL +LD L  +  GQ++F AL  LENPDHH DSV+++ +  +
Sbjct: 42  --------------IYTRLLIHLDLLNEEGQGQVEFAALEQLENPDHHVDSVRIMTMFIR 87

Query: 77  VNEVIAAVHCPVNFNLKDLVKP 12
           + E+++ V CP+ F LKDL++P
Sbjct: 88  IREMVSLVGCPLKFTLKDLLRP 109


Top