BLASTX nr result

ID: Coptis23_contig00016530 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016530
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275843.2| PREDICTED: allantoate deiminase, chloroplast...   172   3e-41
emb|CBI27216.3| unnamed protein product [Vitis vinifera]              172   3e-41
emb|CAN83127.1| hypothetical protein VITISV_029535 [Vitis vinifera]   172   3e-41
ref|XP_002532138.1| conserved hypothetical protein [Ricinus comm...   165   3e-39
ref|XP_002326632.1| predicted protein [Populus trichocarpa] gi|2...   162   2e-38

>ref|XP_002275843.2| PREDICTED: allantoate deiminase, chloroplastic-like [Vitis
           vinifera]
          Length = 492

 Score =  172 bits (436), Expect = 3e-41
 Identities = 84/95 (88%), Positives = 90/95 (94%)
 Frame = -1

Query: 286 IAGQTRLQVTVRGSQGHAGTVPMAMRKDPMAAAAELIVLLESFCKHPEDFLSYDGQCNGF 107
           IAGQTRL+VTVRGSQGHAGTVPM+MR+DPMAAAAELIVLLES CK P+DFLSYDGQCNGF
Sbjct: 268 IAGQTRLKVTVRGSQGHAGTVPMSMRQDPMAAAAELIVLLESLCKRPKDFLSYDGQCNGF 327

Query: 106 SVESLSKSLVCTVGEISIWPGASNVIPGQVTFSVD 2
           +VESLS SLVCTVGEIS WP ASNVIPGQVTF+VD
Sbjct: 328 AVESLSGSLVCTVGEISSWPSASNVIPGQVTFTVD 362


>emb|CBI27216.3| unnamed protein product [Vitis vinifera]
          Length = 478

 Score =  172 bits (436), Expect = 3e-41
 Identities = 84/95 (88%), Positives = 90/95 (94%)
 Frame = -1

Query: 286 IAGQTRLQVTVRGSQGHAGTVPMAMRKDPMAAAAELIVLLESFCKHPEDFLSYDGQCNGF 107
           IAGQTRL+VTVRGSQGHAGTVPM+MR+DPMAAAAELIVLLES CK P+DFLSYDGQCNGF
Sbjct: 254 IAGQTRLKVTVRGSQGHAGTVPMSMRQDPMAAAAELIVLLESLCKRPKDFLSYDGQCNGF 313

Query: 106 SVESLSKSLVCTVGEISIWPGASNVIPGQVTFSVD 2
           +VESLS SLVCTVGEIS WP ASNVIPGQVTF+VD
Sbjct: 314 AVESLSGSLVCTVGEISSWPSASNVIPGQVTFTVD 348


>emb|CAN83127.1| hypothetical protein VITISV_029535 [Vitis vinifera]
          Length = 321

 Score =  172 bits (436), Expect = 3e-41
 Identities = 84/95 (88%), Positives = 90/95 (94%)
 Frame = -1

Query: 286 IAGQTRLQVTVRGSQGHAGTVPMAMRKDPMAAAAELIVLLESFCKHPEDFLSYDGQCNGF 107
           IAGQTRL+VTVRGSQGHAGTVPM+MR+DPMAAAAELIVLLES CK P+DFLSYDGQCNGF
Sbjct: 97  IAGQTRLKVTVRGSQGHAGTVPMSMRQDPMAAAAELIVLLESLCKRPKDFLSYDGQCNGF 156

Query: 106 SVESLSKSLVCTVGEISIWPGASNVIPGQVTFSVD 2
           +VESLS SLVCTVGEIS WP ASNVIPGQVTF+VD
Sbjct: 157 AVESLSGSLVCTVGEISSWPSASNVIPGQVTFTVD 191


>ref|XP_002532138.1| conserved hypothetical protein [Ricinus communis]
           gi|223528174|gb|EEF30237.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 436

 Score =  165 bits (418), Expect = 3e-39
 Identities = 79/95 (83%), Positives = 89/95 (93%)
 Frame = -1

Query: 286 IAGQTRLQVTVRGSQGHAGTVPMAMRKDPMAAAAELIVLLESFCKHPEDFLSYDGQCNGF 107
           IAGQTRL+VTV+GSQGHAGTVPM++R+DPMAAAAELIVLLES CK+P+DFLSYD QCNG 
Sbjct: 212 IAGQTRLKVTVKGSQGHAGTVPMSLRQDPMAAAAELIVLLESLCKYPKDFLSYDSQCNGS 271

Query: 106 SVESLSKSLVCTVGEISIWPGASNVIPGQVTFSVD 2
           ++ESLS SLVCTVGEIS WP ASNVIPGQVTF+VD
Sbjct: 272 TLESLSSSLVCTVGEISTWPSASNVIPGQVTFTVD 306


>ref|XP_002326632.1| predicted protein [Populus trichocarpa] gi|222833954|gb|EEE72431.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score =  162 bits (411), Expect = 2e-38
 Identities = 78/95 (82%), Positives = 88/95 (92%)
 Frame = -1

Query: 286 IAGQTRLQVTVRGSQGHAGTVPMAMRKDPMAAAAELIVLLESFCKHPEDFLSYDGQCNGF 107
           IAGQTRL+VTVRGSQGHAGTVPM++R+DPMAA+AELI+LLES CK+P+DFLSYDG CN  
Sbjct: 247 IAGQTRLKVTVRGSQGHAGTVPMSLRQDPMAASAELIMLLESLCKNPKDFLSYDGHCNDS 306

Query: 106 SVESLSKSLVCTVGEISIWPGASNVIPGQVTFSVD 2
           +VESLS SLVCTVGEIS WP ASNVIPGQVTF+VD
Sbjct: 307 TVESLSNSLVCTVGEISTWPSASNVIPGQVTFTVD 341


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