BLASTX nr result

ID: Coptis23_contig00016528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016528
         (724 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277999.1| PREDICTED: uncharacterized protein LOC100266...   142   9e-32
ref|XP_004171485.1| PREDICTED: uncharacterized LOC101214960, par...   132   7e-29
ref|XP_004140609.1| PREDICTED: uncharacterized protein LOC101214...   132   7e-29
ref|XP_002302514.1| predicted protein [Populus trichocarpa] gi|2...   129   6e-28
gb|AFK47092.1| unknown [Lotus japonicus]                              129   8e-28

>ref|XP_002277999.1| PREDICTED: uncharacterized protein LOC100266783 [Vitis vinifera]
           gi|297734546|emb|CBI16597.3| unnamed protein product
           [Vitis vinifera]
          Length = 260

 Score =  142 bits (357), Expect = 9e-32
 Identities = 74/113 (65%), Positives = 87/113 (76%)
 Frame = +2

Query: 2   SRADGKVKELRQAVDFMKSESXXXXXXXXXXXXXXRRGKMKLRQTGKQIQDVIRSAYKIE 181
           +RAD KV ELR+++D +K+ES              +RG+ KLRQ G QIQ VIRSAYKIE
Sbjct: 148 ARADAKVNELRKSIDLLKAESEKLEKRALQAEDEMKRGRTKLRQAGNQIQSVIRSAYKIE 207

Query: 182 GKARGLKDIVGELPGREASRFRSQVSNLASEAKRERNVLNKEVSKIINYGISI 340
            +ARGLKDI+GELP REASRFRSQVS LASEAKRER+ L+KEVSKI NYGIS+
Sbjct: 208 RQARGLKDILGELPSREASRFRSQVSKLASEAKRERSALSKEVSKISNYGISV 260


>ref|XP_004171485.1| PREDICTED: uncharacterized LOC101214960, partial [Cucumis sativus]
          Length = 186

 Score =  132 bits (332), Expect = 7e-29
 Identities = 72/113 (63%), Positives = 86/113 (76%)
 Frame = +2

Query: 2   SRADGKVKELRQAVDFMKSESXXXXXXXXXXXXXXRRGKMKLRQTGKQIQDVIRSAYKIE 181
           S+AD KVKELRQ++D +K ES               RG+ KLRQ GKQI+ VI+SA+KIE
Sbjct: 74  SKADAKVKELRQSIDRIKVESERLEKRTLQAEDELIRGRTKLRQAGKQIEGVIQSAHKIE 133

Query: 182 GKARGLKDIVGELPGREASRFRSQVSNLASEAKRERNVLNKEVSKIINYGISI 340
            KARGLKDI+ +LP REASRFR+QVSNLASEAK+ER  L+KEVSKI NYGIS+
Sbjct: 134 RKARGLKDILADLPTREASRFRTQVSNLASEAKKERIGLSKEVSKISNYGISV 186


>ref|XP_004140609.1| PREDICTED: uncharacterized protein LOC101214960 [Cucumis sativus]
          Length = 284

 Score =  132 bits (332), Expect = 7e-29
 Identities = 72/113 (63%), Positives = 86/113 (76%)
 Frame = +2

Query: 2   SRADGKVKELRQAVDFMKSESXXXXXXXXXXXXXXRRGKMKLRQTGKQIQDVIRSAYKIE 181
           S+AD KVKELRQ++D +K ES               RG+ KLRQ GKQI+ VI+SA+KIE
Sbjct: 172 SKADAKVKELRQSIDRIKVESERLEKRTLQAEDELIRGRTKLRQAGKQIEGVIQSAHKIE 231

Query: 182 GKARGLKDIVGELPGREASRFRSQVSNLASEAKRERNVLNKEVSKIINYGISI 340
            KARGLKDI+ +LP REASRFR+QVSNLASEAK+ER  L+KEVSKI NYGIS+
Sbjct: 232 RKARGLKDILADLPTREASRFRTQVSNLASEAKKERIGLSKEVSKISNYGISV 284


>ref|XP_002302514.1| predicted protein [Populus trichocarpa] gi|222844240|gb|EEE81787.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score =  129 bits (324), Expect = 6e-28
 Identities = 69/113 (61%), Positives = 85/113 (75%)
 Frame = +2

Query: 2   SRADGKVKELRQAVDFMKSESXXXXXXXXXXXXXXRRGKMKLRQTGKQIQDVIRSAYKIE 181
           S+AD KVKELRQ++  +K+ES               RG+ KLRQ GKQIQ VIRSAYKIE
Sbjct: 158 SQADAKVKELRQSISLLKAESEKLERRASLAEEELIRGRTKLRQAGKQIQGVIRSAYKIE 217

Query: 182 GKARGLKDIVGELPGREASRFRSQVSNLASEAKRERNVLNKEVSKIINYGISI 340
            +A GL+DI+ ELP  EAS+FRSQVS+LASEAK+ERN L+KEV+KI N+GIS+
Sbjct: 218 RQATGLRDILRELPRAEASKFRSQVSSLASEAKQERNALSKEVAKISNHGISV 270


>gb|AFK47092.1| unknown [Lotus japonicus]
          Length = 262

 Score =  129 bits (323), Expect = 8e-28
 Identities = 69/113 (61%), Positives = 82/113 (72%)
 Frame = +2

Query: 2   SRADGKVKELRQAVDFMKSESXXXXXXXXXXXXXXRRGKMKLRQTGKQIQDVIRSAYKIE 181
           SRA  +VKELR+++D +K+E                 G+ KLRQ GKQI++VI SAYKIE
Sbjct: 150 SRASAEVKELRKSIDLLKAEGEKWEKSALHAEEQFLHGRTKLRQAGKQIRNVIDSAYKIE 209

Query: 182 GKARGLKDIVGELPGREASRFRSQVSNLASEAKRERNVLNKEVSKIINYGISI 340
            +A GLKDI+GELP REAS FRSQVS LASEAKRE+N L KEVSKI NYGIS+
Sbjct: 210 RRAGGLKDILGELPRREASHFRSQVSKLASEAKREKNSLTKEVSKISNYGISV 262


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