BLASTX nr result

ID: Coptis23_contig00016502 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016502
         (1199 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_193341.3| uncharacterized protein [Arabidopsis thaliana] ...   390   e-106
ref|XP_002870187.1| hypothetical protein ARALYDRAFT_493280 [Arab...   389   e-105
ref|XP_002273099.1| PREDICTED: uncharacterized protein LOC100251...   378   e-102
ref|XP_002315483.1| predicted protein [Populus trichocarpa] gi|2...   376   e-102
ref|XP_002271042.1| PREDICTED: uncharacterized protein LOC100265...   370   e-100

>ref|NP_193341.3| uncharacterized protein [Arabidopsis thaliana]
           gi|332658287|gb|AEE83687.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 289

 Score =  390 bits (1001), Expect = e-106
 Identities = 198/278 (71%), Positives = 226/278 (81%), Gaps = 7/278 (2%)
 Frame = +3

Query: 57  STPTTQHFPSLKFKISTHP---TISMASS----DGPQSISITKIWTQFNNESDLASLLSS 215
           S P +  F S   K    P   T+S++SS    D  +SI       +  +ESD   LLSS
Sbjct: 12  SLPFSFAFSSTPCKSRASPPRSTVSLSSSRRRQDRRRSIEAMSQVMELEDESDFEKLLSS 71

Query: 216 DGYISICGFGSLLSEKSARSTFPELINFRIAKLNGFRRVFAHAAPIFFQRGIANAETQEI 395
           D  ISI GFGSLLSE+SARSTFP+L NFRIAKL GFRRVFAH+APIFF+RGIAN ET+EI
Sbjct: 72  DNRISITGFGSLLSERSARSTFPDLENFRIAKLQGFRRVFAHSAPIFFERGIANPETKEI 131

Query: 396 SSLSVEPCEGESLVVTVFEIKESEIPSFIEREHEFRFLAVVPETLEGRPFTNRAVLCGRY 575
           SSLSVEPCEGESLVVTVFEIK SEIP+FI RE EFRFLAVVPETLEG+P+TN AVLCGRY
Sbjct: 132 SSLSVEPCEGESLVVTVFEIKSSEIPAFIGRELEFRFLAVVPETLEGKPYTNSAVLCGRY 191

Query: 576 SDEEYFQVRCKGSREVYFERYGQYNIHKIWRDDILPCRIYLRHCVLAARNLCDVAYNNFL 755
           SDEE+FQ+RCKG++ +YF+ YG++ I KIWRDDILPCR+YLRHCVLAA+NL D AYNNFL
Sbjct: 192 SDEEFFQIRCKGNKGIYFQHYGRFKIDKIWRDDILPCRLYLRHCVLAAKNLGDEAYNNFL 251

Query: 756 DHTFLGDRKTTIRQYLGTKGSGIMEEEPPETLKTRYGG 869
           DHTFLGDRKTTIR+YL + GSGIMEEEPPE LK+RYGG
Sbjct: 252 DHTFLGDRKTTIREYLSSTGSGIMEEEPPEALKSRYGG 289


>ref|XP_002870187.1| hypothetical protein ARALYDRAFT_493280 [Arabidopsis lyrata subsp.
           lyrata] gi|297316023|gb|EFH46446.1| hypothetical protein
           ARALYDRAFT_493280 [Arabidopsis lyrata subsp. lyrata]
          Length = 297

 Score =  389 bits (998), Expect = e-105
 Identities = 185/232 (79%), Positives = 210/232 (90%)
 Frame = +3

Query: 174 QFNNESDLASLLSSDGYISICGFGSLLSEKSARSTFPELINFRIAKLNGFRRVFAHAAPI 353
           +  +ESD   LLSSD  ISI GFGSLLSE+SARSTFP+L NFRIAKL GFRRVFAH+API
Sbjct: 66  ELEDESDFEKLLSSDNRISIAGFGSLLSERSARSTFPDLENFRIAKLQGFRRVFAHSAPI 125

Query: 354 FFQRGIANAETQEISSLSVEPCEGESLVVTVFEIKESEIPSFIEREHEFRFLAVVPETLE 533
           FF+ GIAN ET+EISSLSVEPCEGESLVVTVFEIK SEIP+FI+RE EFRFLAVVPET+E
Sbjct: 126 FFELGIANPETKEISSLSVEPCEGESLVVTVFEIKSSEIPAFIQRELEFRFLAVVPETME 185

Query: 534 GRPFTNRAVLCGRYSDEEYFQVRCKGSREVYFERYGQYNIHKIWRDDILPCRIYLRHCVL 713
           G+P+TN AVLCGRYSDEE+FQ+RCKG++E+YF+ YG++NI KIWRDDILPCR+YLRHCVL
Sbjct: 186 GKPYTNSAVLCGRYSDEEFFQIRCKGNKEIYFQHYGRFNIEKIWRDDILPCRLYLRHCVL 245

Query: 714 AARNLCDVAYNNFLDHTFLGDRKTTIRQYLGTKGSGIMEEEPPETLKTRYGG 869
           AA+NL D AYNNFLDHTFLGDRKTTIR+YL + GSGIMEEEPPE LK+RYGG
Sbjct: 246 AAKNLGDEAYNNFLDHTFLGDRKTTIREYLSSTGSGIMEEEPPEALKSRYGG 297


>ref|XP_002273099.1| PREDICTED: uncharacterized protein LOC100251759 [Vitis vinifera]
           gi|296083318|emb|CBI22954.3| unnamed protein product
           [Vitis vinifera]
          Length = 248

 Score =  378 bits (971), Expect = e-102
 Identities = 177/235 (75%), Positives = 207/235 (88%), Gaps = 3/235 (1%)
 Frame = +3

Query: 174 QFNNESDLASLLSSDG---YISICGFGSLLSEKSARSTFPELINFRIAKLNGFRRVFAHA 344
           +  +ESD   +LS DG    +S+CGFGSLLSE+SARSTFP+L+NFR+A+LN FRRVFAH 
Sbjct: 14  ELKDESDFEKVLSPDGGLGLLSVCGFGSLLSERSARSTFPDLMNFRVARLNSFRRVFAHV 73

Query: 345 APIFFQRGIANAETQEISSLSVEPCEGESLVVTVFEIKESEIPSFIEREHEFRFLAVVPE 524
           APIFF+RGIA  ET EISSLSVEPCEGE+L+VTVFEI+ SEIPSFI+REHEFRFLAV PE
Sbjct: 74  APIFFERGIAKPETMEISSLSVEPCEGETLIVTVFEIQRSEIPSFIKREHEFRFLAVFPE 133

Query: 525 TLEGRPFTNRAVLCGRYSDEEYFQVRCKGSREVYFERYGQYNIHKIWRDDILPCRIYLRH 704
           TL+G+ FT  AVLC RYSDEE+FQ RCKGS+E+YF++YG++NIHKIWRDD+LPCR+YLRH
Sbjct: 134 TLDGKLFTTPAVLCARYSDEEFFQNRCKGSKEIYFQQYGRHNIHKIWRDDVLPCRVYLRH 193

Query: 705 CVLAARNLCDVAYNNFLDHTFLGDRKTTIRQYLGTKGSGIMEEEPPETLKTRYGG 869
           CVLAA+NL D AYNNFLDHTFL DRKTTIR+YL T GSGIMEEEPPE+L+ RYGG
Sbjct: 194 CVLAAKNLSDAAYNNFLDHTFLADRKTTIREYLATTGSGIMEEEPPESLRARYGG 248


>ref|XP_002315483.1| predicted protein [Populus trichocarpa] gi|222864523|gb|EEF01654.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score =  376 bits (966), Expect = e-102
 Identities = 179/234 (76%), Positives = 209/234 (89%), Gaps = 2/234 (0%)
 Frame = +3

Query: 174 QFNNESDLASLLSSDG--YISICGFGSLLSEKSARSTFPELINFRIAKLNGFRRVFAHAA 347
           +  ++SD  S LSS     IS+CGFGSLLSE+SARSTFP+L+NFR+A+LNGFRRVFAH A
Sbjct: 12  ELRDDSDFRSFLSSSDSDLISVCGFGSLLSERSARSTFPDLLNFRVARLNGFRRVFAHVA 71

Query: 348 PIFFQRGIANAETQEISSLSVEPCEGESLVVTVFEIKESEIPSFIEREHEFRFLAVVPET 527
           PIFF+RGIA  ET+EISSLSVEPCEGE LVVTVFEI++SEIP+F+ERE EFRFLAVVPET
Sbjct: 72  PIFFERGIAKPETKEISSLSVEPCEGEGLVVTVFEIEKSEIPAFMERELEFRFLAVVPET 131

Query: 528 LEGRPFTNRAVLCGRYSDEEYFQVRCKGSREVYFERYGQYNIHKIWRDDILPCRIYLRHC 707
           L+G+PF   AVLC RYSDEE+FQVRCKGS+E+YF+ YG+YNI+KIWRDDILPCR YLRHC
Sbjct: 132 LDGKPFDFPAVLCARYSDEEFFQVRCKGSKEIYFQHYGRYNINKIWRDDILPCRAYLRHC 191

Query: 708 VLAARNLCDVAYNNFLDHTFLGDRKTTIRQYLGTKGSGIMEEEPPETLKTRYGG 869
           VLAA+NL D A++NFL+HTFLGDRKTTIR+YL T G+GIMEEEPPE+LKTRYGG
Sbjct: 192 VLAAKNLSDAAHSNFLEHTFLGDRKTTIREYLATTGAGIMEEEPPESLKTRYGG 245


>ref|XP_002271042.1| PREDICTED: uncharacterized protein LOC100265416 [Vitis vinifera]
           gi|296083319|emb|CBI22955.3| unnamed protein product
           [Vitis vinifera]
          Length = 308

 Score =  370 bits (951), Expect = e-100
 Identities = 173/234 (73%), Positives = 205/234 (87%), Gaps = 1/234 (0%)
 Frame = +3

Query: 171 TQFNNESDLASLLSS-DGYISICGFGSLLSEKSARSTFPELINFRIAKLNGFRRVFAHAA 347
           T+ ++ESD   L SS D  +SICGFGSLLSE+SARSTFP+LINFR+A+LNGFRRVFAH  
Sbjct: 75  TELHDESDFERLASSNDDLLSICGFGSLLSERSARSTFPDLINFRVARLNGFRRVFAHVT 134

Query: 348 PIFFQRGIANAETQEISSLSVEPCEGESLVVTVFEIKESEIPSFIEREHEFRFLAVVPET 527
           P+FF+RGIA  ET EIS LSVEPCEGESL+VTVFEI  SEIPS+I+RE E+RFLAV PET
Sbjct: 135 PVFFERGIAKPETMEISGLSVEPCEGESLIVTVFEIHRSEIPSYIKREIEYRFLAVFPET 194

Query: 528 LEGRPFTNRAVLCGRYSDEEYFQVRCKGSREVYFERYGQYNIHKIWRDDILPCRIYLRHC 707
           L+G PFT+ AVLC RYSDEE+ Q+RCKGS+E++FE+YG+YNIHKIWRDD+ PCR+YLRHC
Sbjct: 195 LDGTPFTSPAVLCARYSDEEFLQIRCKGSKEMFFEQYGRYNIHKIWRDDVFPCRVYLRHC 254

Query: 708 VLAARNLCDVAYNNFLDHTFLGDRKTTIRQYLGTKGSGIMEEEPPETLKTRYGG 869
           +LAA++L D AYN+FLDHTFL DRKTTI++YL T GSGIMEEEPPE+LK RYGG
Sbjct: 255 LLAAKSLSDAAYNDFLDHTFLADRKTTIQEYLATTGSGIMEEEPPESLKARYGG 308


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