BLASTX nr result

ID: Coptis23_contig00016479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016479
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273742.2| PREDICTED: probable xyloglucan endotransgluc...   205   4e-51
ref|XP_003633213.1| PREDICTED: probable xyloglucan endotransgluc...   202   3e-50
ref|XP_002270416.1| PREDICTED: probable xyloglucan endotransgluc...   202   3e-50
ref|XP_002274858.1| PREDICTED: probable xyloglucan endotransgluc...   201   7e-50
emb|CBI17801.3| unnamed protein product [Vitis vinifera]              198   4e-49

>ref|XP_002273742.2| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase
           protein 23-like [Vitis vinifera]
          Length = 297

 Score =  205 bits (521), Expect = 4e-51
 Identities = 100/122 (81%), Positives = 111/122 (90%), Gaps = 2/122 (1%)
 Frame = -1

Query: 360 CSTYSSMVSRLF--IISTLLVAALAGNFYQDFDITWGDGRGKMLSNGQLLTLSLDKASGS 187
           CS+ S++ + L   ++ + L+AA AGNFYQDFDITWGDGRGK+L+NG+LLTLSLDK SGS
Sbjct: 5   CSSSSAVSTALLMSVVVSFLMAASAGNFYQDFDITWGDGRGKILNNGELLTLSLDKPSGS 64

Query: 186 GFQSKKEYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYILHT 7
           GFQSK EYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYILHT
Sbjct: 65  GFQSKNEYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYILHT 124

Query: 6   NV 1
           NV
Sbjct: 125 NV 126


>ref|XP_003633213.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase
           protein 23-like [Vitis vinifera]
          Length = 345

 Score =  202 bits (513), Expect = 3e-50
 Identities = 99/121 (81%), Positives = 110/121 (90%), Gaps = 2/121 (1%)
 Frame = -1

Query: 357 STYSSMVSRLFI--ISTLLVAALAGNFYQDFDITWGDGRGKMLSNGQLLTLSLDKASGSG 184
           S++S + + L I  +++ L+AA AGNFYQDFDITWGDGR K+L+NG+LLTLSLDK SGSG
Sbjct: 6   SSFSVVSTALLISVVASFLMAASAGNFYQDFDITWGDGRAKILNNGELLTLSLDKTSGSG 65

Query: 183 FQSKKEYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYILHTN 4
           FQSK EYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYILHTN
Sbjct: 66  FQSKNEYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYILHTN 125

Query: 3   V 1
           V
Sbjct: 126 V 126


>ref|XP_002270416.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase
           protein 23 [Vitis vinifera]
          Length = 296

 Score =  202 bits (513), Expect = 3e-50
 Identities = 100/125 (80%), Positives = 110/125 (88%), Gaps = 3/125 (2%)
 Frame = -1

Query: 366 MACSTYSSMVSRLFIISTLL---VAALAGNFYQDFDITWGDGRGKMLSNGQLLTLSLDKA 196
           MA ++ S++  +L ++S LL   V A  GN YQDFD+TWGDGR K+L+NGQLLTLSLDKA
Sbjct: 1   MASTSTSNLSPKLLLLSLLLGSFVVASVGNLYQDFDLTWGDGRAKILNNGQLLTLSLDKA 60

Query: 195 SGSGFQSKKEYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYI 16
           SGSGFQSK EYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYI
Sbjct: 61  SGSGFQSKNEYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYI 120

Query: 15  LHTNV 1
           LHTNV
Sbjct: 121 LHTNV 125


>ref|XP_002274858.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase
           protein 23 [Vitis vinifera]
          Length = 296

 Score =  201 bits (510), Expect = 7e-50
 Identities = 100/125 (80%), Positives = 109/125 (87%), Gaps = 3/125 (2%)
 Frame = -1

Query: 366 MACSTYSSMVSRLFIISTLL---VAALAGNFYQDFDITWGDGRGKMLSNGQLLTLSLDKA 196
           MA  + S++  +L ++S LL   V A  GN YQDFD+TWGDGR K+L+NGQLLTLSLDKA
Sbjct: 1   MASPSTSNLSPKLLLMSLLLGSFVVASVGNLYQDFDLTWGDGRAKILNNGQLLTLSLDKA 60

Query: 195 SGSGFQSKKEYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYI 16
           SGSGFQSK EYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYI
Sbjct: 61  SGSGFQSKNEYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYI 120

Query: 15  LHTNV 1
           LHTNV
Sbjct: 121 LHTNV 125


>emb|CBI17801.3| unnamed protein product [Vitis vinifera]
          Length = 345

 Score =  198 bits (503), Expect = 4e-49
 Identities = 99/125 (79%), Positives = 107/125 (85%), Gaps = 3/125 (2%)
 Frame = -1

Query: 366 MACSTYSSMVSRLFIISTLL---VAALAGNFYQDFDITWGDGRGKMLSNGQLLTLSLDKA 196
           M   T S++  +L ++S LL   V A  GN YQDFDITWGDGR K+L+NGQLLTLSLDKA
Sbjct: 91  MTYPTTSNLSPKLLLLSLLLGSFVVASVGNLYQDFDITWGDGRAKILNNGQLLTLSLDKA 150

Query: 195 SGSGFQSKKEYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYI 16
           SGSGF+S  EYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYI
Sbjct: 151 SGSGFRSNNEYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYI 210

Query: 15  LHTNV 1
           LHTNV
Sbjct: 211 LHTNV 215


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