BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016472
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279701.2| PREDICTED: pentatricopeptide repeat-containi...   130   8e-29
emb|CBI20513.3| unnamed protein product [Vitis vinifera]              130   8e-29
ref|XP_002522838.1| pentatricopeptide repeat-containing protein,...   122   3e-26
ref|XP_002319806.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_003574111.1| PREDICTED: pentatricopeptide repeat-containi...   110   2e-22

>ref|XP_002279701.2| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
            mitochondrial-like [Vitis vinifera]
          Length = 848

 Score =  130 bits (328), Expect = 8e-29
 Identities = 64/114 (56%), Positives = 83/114 (72%)
 Frame = -1

Query: 457  DQVFCRIYEIEPIDLQIGLDLLQVVKEELMLFPSRTSLDFLLSACVSARDPRCGRLVREE 278
            D+VF  I EIEP++L+IGLDLL  +KEEL L PSR SLDFLL+ACV+ +D    RL+  E
Sbjct: 714  DEVFSLIAEIEPVNLKIGLDLLTAIKEELGLRPSRKSLDFLLAACVNGKDLDNSRLIWRE 773

Query: 277  YLKAGLAFNVLTYLRIYQLHLACGEYKDAEKVLGKMPLSDPHVRTIVKACELTY 116
            Y  AG   NVL++LR+YQ  LACG++K A  +L K+P  DPHV  ++KAC+ TY
Sbjct: 774  YQTAGFTHNVLSFLRMYQACLACGDHKSAANILHKIPKDDPHVCCVIKACQTTY 827


>emb|CBI20513.3| unnamed protein product [Vitis vinifera]
          Length = 618

 Score =  130 bits (328), Expect = 8e-29
 Identities = 64/114 (56%), Positives = 83/114 (72%)
 Frame = -1

Query: 457 DQVFCRIYEIEPIDLQIGLDLLQVVKEELMLFPSRTSLDFLLSACVSARDPRCGRLVREE 278
           D+VF  I EIEP++L+IGLDLL  +KEEL L PSR SLDFLL+ACV+ +D    RL+  E
Sbjct: 484 DEVFSLIAEIEPVNLKIGLDLLTAIKEELGLRPSRKSLDFLLAACVNGKDLDNSRLIWRE 543

Query: 277 YLKAGLAFNVLTYLRIYQLHLACGEYKDAEKVLGKMPLSDPHVRTIVKACELTY 116
           Y  AG   NVL++LR+YQ  LACG++K A  +L K+P  DPHV  ++KAC+ TY
Sbjct: 544 YQTAGFTHNVLSFLRMYQACLACGDHKSAANILHKIPKDDPHVCCVIKACQTTY 597


>ref|XP_002522838.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223537922|gb|EEF39536.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 867

 Score =  122 bits (306), Expect = 3e-26
 Identities = 59/114 (51%), Positives = 82/114 (71%)
 Frame = -1

Query: 457  DQVFCRIYEIEPIDLQIGLDLLQVVKEELMLFPSRTSLDFLLSACVSARDPRCGRLVREE 278
            D+VF  I E+EP DL IGLDLLQV+K+EL + PSR SLDFLLSAC  A+D      + +E
Sbjct: 743  DEVFSLIAEMEPTDLLIGLDLLQVIKDELCVCPSRKSLDFLLSACAKAKDLTNSLFIWKE 802

Query: 277  YLKAGLAFNVLTYLRIYQLHLACGEYKDAEKVLGKMPLSDPHVRTIVKACELTY 116
            Y  AG  +NV++YLR+YQ  L+ G+Y+ A+ +L ++   DPHVR +++AC+ TY
Sbjct: 803  YHAAGYPYNVISYLRMYQALLSSGDYRSAKVILAEIQKDDPHVRRMIQACQKTY 856


>ref|XP_002319806.1| predicted protein [Populus trichocarpa] gi|222858182|gb|EEE95729.1|
           predicted protein [Populus trichocarpa]
          Length = 784

 Score =  117 bits (292), Expect = 1e-24
 Identities = 57/114 (50%), Positives = 81/114 (71%)
 Frame = -1

Query: 457 DQVFCRIYEIEPIDLQIGLDLLQVVKEELMLFPSRTSLDFLLSACVSARDPRCGRLVREE 278
           D+VF ++ E EP +++IG+DLLQ +K+EL   PSR  LDFLL+ACV+A+D     LV +E
Sbjct: 649 DEVFSQVAETEPANVRIGMDLLQAIKDELGASPSRKCLDFLLTACVNAKDLGNSLLVWKE 708

Query: 277 YLKAGLAFNVLTYLRIYQLHLACGEYKDAEKVLGKMPLSDPHVRTIVKACELTY 116
           Y  AGL +NV +YLR+YQ  LA G +  A+ +L K+P  DPHVR +++ C+ TY
Sbjct: 709 YQAAGLPYNVTSYLRMYQALLASGGHVSAKVMLNKIPKDDPHVRIVIQECQRTY 762


>ref|XP_003574111.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
            mitochondrial-like [Brachypodium distachyon]
          Length = 859

 Score =  110 bits (274), Expect = 2e-22
 Identities = 58/114 (50%), Positives = 78/114 (68%)
 Frame = -1

Query: 457  DQVFCRIYEIEPIDLQIGLDLLQVVKEELMLFPSRTSLDFLLSACVSARDPRCGRLVREE 278
            DQVFC+I+E+EP++L +G+ LL  VKE L L  SRTSLDFLLS CV A+D R    +  E
Sbjct: 724  DQVFCQIWEMEPVNLDVGMTLLHAVKE-LGLNLSRTSLDFLLSTCVKAKDSRRAHQIWTE 782

Query: 277  YLKAGLAFNVLTYLRIYQLHLACGEYKDAEKVLGKMPLSDPHVRTIVKACELTY 116
            Y  +GL  NVLT LR+ Q   + G+   A K+L K+P+ D HVR I+ +C++TY
Sbjct: 783  YESSGLPHNVLTSLRMCQALFSSGQRTAAGKLLRKIPIEDHHVRYIINSCKMTY 836