BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016439
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_177812.1| U6 snRNA-associated Sm-like protein LSm3 [Arabi...    63   2e-08
ref|XP_002889106.1| hypothetical protein ARALYDRAFT_895567 [Arab...    63   2e-08
gb|AFK35032.1| unknown [Lotus japonicus] gi|388511495|gb|AFK4380...    62   4e-08
ref|NP_001235961.1| uncharacterized protein LOC100499782 [Glycin...    62   4e-08
ref|XP_002532432.1| snrnp sm protein, putative [Ricinus communis...    62   4e-08

>ref|NP_177812.1| U6 snRNA-associated Sm-like protein LSm3 [Arabidopsis thaliana]
           gi|12322228|gb|AAG51149.1|AC079283_6 Sm-like protein
           [Arabidopsis thaliana] gi|21592388|gb|AAM64339.1|
           Sm-like protein [Arabidopsis thaliana]
           gi|98961019|gb|ABF58993.1| At1g76860 [Arabidopsis
           thaliana] gi|332197775|gb|AEE35896.1| U6
           snRNA-associated Sm-like protein LSm3 [Arabidopsis
           thaliana]
          Length = 98

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/33 (87%), Positives = 32/33 (96%)
 Frame = -1

Query: 334 TYEEIVRTTKRNVQYLFVRGDGVILVSPPLRTA 236
           TYEEIVRTTKR +++LFVRGDGVILVSPPLRTA
Sbjct: 65  TYEEIVRTTKRTIEFLFVRGDGVILVSPPLRTA 97


>ref|XP_002889106.1| hypothetical protein ARALYDRAFT_895567 [Arabidopsis lyrata subsp.
           lyrata] gi|297334947|gb|EFH65365.1| hypothetical protein
           ARALYDRAFT_895567 [Arabidopsis lyrata subsp. lyrata]
          Length = 98

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/33 (87%), Positives = 32/33 (96%)
 Frame = -1

Query: 334 TYEEIVRTTKRNVQYLFVRGDGVILVSPPLRTA 236
           TYEEIVRTTKR +++LFVRGDGVILVSPPLRTA
Sbjct: 65  TYEEIVRTTKRTIEFLFVRGDGVILVSPPLRTA 97


>gb|AFK35032.1| unknown [Lotus japonicus] gi|388511495|gb|AFK43809.1| unknown
           [Lotus japonicus]
          Length = 97

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/33 (90%), Positives = 31/33 (93%)
 Frame = -1

Query: 334 TYEEIVRTTKRNVQYLFVRGDGVILVSPPLRTA 236
           TYEEIVRTTKR V +LFVRGDGVILVSPPLRTA
Sbjct: 65  TYEEIVRTTKRTVPFLFVRGDGVILVSPPLRTA 97


>ref|NP_001235961.1| uncharacterized protein LOC100499782 [Glycine max]
           gi|255626487|gb|ACU13588.1| unknown [Glycine max]
          Length = 97

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/33 (90%), Positives = 31/33 (93%)
 Frame = -1

Query: 334 TYEEIVRTTKRNVQYLFVRGDGVILVSPPLRTA 236
           TYEEIVRTTKR V +LFVRGDGVILVSPPLRTA
Sbjct: 65  TYEEIVRTTKRTVPFLFVRGDGVILVSPPLRTA 97


>ref|XP_002532432.1| snrnp sm protein, putative [Ricinus communis]
           gi|223527852|gb|EEF29947.1| snrnp sm protein, putative
           [Ricinus communis]
          Length = 97

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/33 (90%), Positives = 31/33 (93%)
 Frame = -1

Query: 334 TYEEIVRTTKRNVQYLFVRGDGVILVSPPLRTA 236
           TYEEIVRTTKR V +LFVRGDGVILVSPPLRTA
Sbjct: 65  TYEEIVRTTKRTVPFLFVRGDGVILVSPPLRTA 97